RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W COF1Q03048 143 aaKnown RBP2.46□□□□□ -2.02
MSH2YOL090W YML108WQ03759 105 aa2.46□□□□□ -2.02
MSH2YOL090W DFM1Q12743 341 aaKnown RBP2.46□□□□□ -2.02
MSH2YOL090W PGD1P40356 397 aa2.46□□□□□ -2.02
MSH2YOL090W UFD1P53044 361 aa2.46□□□□□ -2.02
MSH2YOL090W HHT1P61830 136 aa2.46□□□□□ -2.02
MSH2YOL090W AKR2Q12013 749 aa2.46□□□□□ -2.02
MSH2YOL090W MCP1Q12106 302 aa2.46□□□□□ -2.02
MSH2YOL090W ATO3Q12359 275 aa2.46□□□□□ -2.02
MSH2YOL090W DGK1Q12382 290 aa2.46□□□□□ -2.02
MSH2YOL090W ADK1P07170 222 aaKnown RBP2.45□□□□□ -2.02
MSH2YOL090W MRP49P32388 137 aa2.45□□□□□ -2.02
MSH2YOL090W GSP1P32835 219 aaKnown RBP2.45□□□□□ -2.02
MSH2YOL090W GSP2P32836 220 aaKnown RBP2.45□□□□□ -2.02
MSH2YOL090W SDH3P33421 198 aa2.45□□□□□ -2.02
MSH2YOL090W YBR063CP38083 404 aa2.45□□□□□ -2.02
MSH2YOL090W YHI9P38765 294 aa2.45□□□□□ -2.02
MSH2YOL090W MED6P38782 295 aa2.45□□□□□ -2.02
MSH2YOL090W OSH6Q02201 448 aa2.45□□□□□ -2.02
MSH2YOL090W YPR170W-BP0C5R9 85 aa2.45□□□□□ -2.02
MSH2YOL090W RPB3P16370 318 aaKnown RBP2.45□□□□□ -2.02
MSH2YOL090W TOM40P23644 387 aaKnown RBP2.45□□□□□ -2.02
MSH2YOL090W RPS20P38701 121 aaKnown RBP2.45□□□□□ -2.02
MSH2YOL090W YNL200CP40165 246 aaKnown RBP2.45□□□□□ -2.02
MSH2YOL090W DLS1P40366 167 aa2.45□□□□□ -2.02
MSH2YOL090W REE1P40893 198 aa2.45□□□□□ -2.02
MSH2YOL090W SNM1P40993 198 aa2.45□□□□□ -2.02
MSH2YOL090W BUD13P46947 266 aaPredicted RBP2.45□□□□□ -2.02
MSH2YOL090W SLM2P53955 656 aa2.45□□□□□ -2.02
MSH2YOL090W YLR099W-AQ3E798 87 aa2.45□□□□□ -2.02
MSH2YOL090W FLO11P08640 1367 aa2.45□□□□□ -2.02
MSH2YOL090W MIG3P39943 394 aa2.44□□□□□ -2.02
MSH2YOL090W OST2P46964 130 aa2.44□□□□□ -2.02
MSH2YOL090W TDA4P47153 279 aa2.44□□□□□ -2.02
MSH2YOL090W PBA1Q05778 276 aa2.44□□□□□ -2.02
MSH2YOL090W YOL029CQ08187 201 aa2.44□□□□□ -2.02
MSH2YOL090W SMT3Q12306 101 aaKnown RBP2.44□□□□□ -2.02
MSH2YOL090W ATP15P21306 62 aa2.44□□□□□ -2.02
MSH2YOL090W SPT14P32363 452 aa2.44□□□□□ -2.02
MSH2YOL090W HYM1P32464 399 aa2.44□□□□□ -2.02
MSH2YOL090W BOR1P53838 576 aa2.44□□□□□ -2.02
MSH2YOL090W APJ1P53940 528 aa2.44□□□□□ -2.02
MSH2YOL090W DIG2Q03373 323 aaKnown RBP2.44□□□□□ -2.02
MSH2YOL090W NAT3Q06504 195 aa2.44□□□□□ -2.02
MSH2YOL090W YOL085CQ99345 113 aa2.44□□□□□ -2.02
MSH2YOL090W TAD3Q9URQ3 322 aa2.44□□□□□ -2.02
MSH2YOL090W REP2P03872 296 aa2.43□□□□□ -2.02
MSH2YOL090W NMT1P14743 455 aa2.43□□□□□ -2.02
MSH2YOL090W ASK1P35734 292 aa2.43□□□□□ -2.02
MSH2YOL090W OM14P38325 134 aa2.43□□□□□ -2.02
MSH2YOL090W PTH1P38876 190 aaKnown RBP2.43□□□□□ -2.02
MSH2YOL090W GLR1P41921 483 aaKnown RBP2.43□□□□□ -2.02
MSH2YOL090W YFL019CP43576 117 aa2.43□□□□□ -2.02
MSH2YOL090W VPS71Q03433 280 aa2.43□□□□□ -2.02
MSH2YOL090W SDH7Q04401 133 aa2.43□□□□□ -2.02
MSH2YOL090W PRP11Q07350 266 aaPredicted RBP2.43□□□□□ -2.02
MSH2YOL090W YLR156WP0CE96 114 aa2.43□□□□□ -2.02
MSH2YOL090W YLR159WP0CE97 114 aa2.43□□□□□ -2.02
MSH2YOL090W YLR161WP0CE98 114 aa2.43□□□□□ -2.02
MSH2YOL090W POP4P38336 279 aa2.43□□□□□ -2.02
MSH2YOL090W TEM1P38987 245 aa2.43□□□□□ -2.02
MSH2YOL090W RPE1P46969 238 aa2.43□□□□□ -2.02
MSH2YOL090W RSM10Q03201 203 aa2.43□□□□□ -2.02
MSH2YOL090W YLR281CQ05863 155 aa2.43□□□□□ -2.02
MSH2YOL090W NKP2Q06162 153 aa2.43□□□□□ -2.02
MSH2YOL090W YPL225WQ08971 146 aaKnown RBP2.43□□□□□ -2.02
MSH2YOL090W ATP14Q12349 124 aa2.43□□□□□ -2.02
MSH2YOL090W YOR020W-AQ3E824 90 aa2.43□□□□□ -2.02
MSH2YOL090W YPR014CQ6B0W2 109 aa2.43□□□□□ -2.02
MSH2YOL090W YAL067W-AQ8TGK6 75 aa2.43□□□□□ -2.02
MSH2YOL090W PRE7P23724 241 aaKnown RBP2.43□□□□□ -2.02
MSH2YOL090W TFC1P32367 649 aa2.43□□□□□ -2.02
MSH2YOL090W YRA2P36036 203 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
MSH2YOL090W SHE2P36068 246 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
MSH2YOL090W PAN3P36102 679 aaPredicted RBP2.43□□□□□ -2.02
MSH2YOL090W YKR070WP36151 352 aaKnown RBP2.43□□□□□ -2.02
MSH2YOL090W SWD3P38123 315 aa2.43□□□□□ -2.02
MSH2YOL090W FYV4P38783 130 aaPredicted RBP2.43□□□□□ -2.02
MSH2YOL090W VMA7P39111 118 aa2.43□□□□□ -2.02
MSH2YOL090W YJL218WP40892 196 aaKnown RBP2.43□□□□□ -2.02
MSH2YOL090W YGL118CP53132 145 aa2.43□□□□□ -2.02
MSH2YOL090W YPL264CQ08980 353 aa2.43□□□□□ -2.02
MSH2YOL090W SGA1P08019 549 aa2.42□□□□□ -2.02
MSH2YOL090W SER2P42941 309 aa2.42□□□□□ -2.02
MSH2YOL090W CNL1Q06333 122 aa2.42□□□□□ -2.02
MSH2YOL090W IRC25Q07951 179 aa2.42□□□□□ -2.02
MSH2YOL090W YOL014WQ08110 124 aa2.42□□□□□ -2.02
MSH2YOL090W SRL1Q08673 210 aa2.42□□□□□ -2.02
MSH2YOL090W YDL211CQ12121 372 aa2.42□□□□□ -2.02
MSH2YOL090W GEP5Q12393 293 aa2.42□□□□□ -2.02
MSH2YOL090W PSF1Q12488 208 aa2.42□□□□□ -2.02
MSH2YOL090W YML100W-AQ8TGT0 57 aa2.42□□□□□ -2.02
MSH2YOL090W YPT53P36019 220 aa2.42□□□□□ -2.02
MSH2YOL090W MRPL24P36525 258 aaPredicted RBP2.42□□□□□ -2.02
MSH2YOL090W ASP1P38986 381 aaPredicted RBP2.42□□□□□ -2.02
MSH2YOL090W VTC1P40046 129 aaRIP-Chip data2.42□□□□□ -2.02 RIP-Chip
MSH2YOL090W IGD1P43598 195 aa2.42□□□□□ -2.02
MSH2YOL090W SCW4P53334 386 aaKnown RBP2.42□□□□□ -2.02
MSH2YOL090W YDR366CP87287 132 aa2.42□□□□□ -2.02
MSH2YOL090W YIR021W-AQ3E739 70 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms