RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C RUD3Q12234 484 aaKnown RBP1.21□□□□□ -2.22
RPB11YOL005C YCL012CQ8J0M4 134 aa1.21□□□□□ -2.22
RPB11YOL005C CYR1P08678 2026 aaKnown RBP1.21□□□□□ -2.22
RPB11YOL005C STT4P37297 1900 aa1.21□□□□□ -2.22
RPB11YOL005C SPT3P06844 337 aa1.2□□□□□ -2.22
RPB11YOL005C YFR010W-AP0C5N0 62 aa1.2□□□□□ -2.22
RPB11YOL005C GCY1P14065 312 aaKnown RBP RIP-Chip data1.2□□□□□ -2.22not detected
RPB11YOL005C PET9P18239 318 aaKnown RBP1.2□□□□□ -2.22
RPB11YOL005C YMR31P19955 123 aa1.2□□□□□ -2.22
RPB11YOL005C MDH2P22133 377 aa1.2□□□□□ -2.22
RPB11YOL005C RAD51P25454 400 aa1.2□□□□□ -2.22
RPB11YOL005C BUB2P26448 306 aaPredicted RBP1.2□□□□□ -2.22
RPB11YOL005C PRE6P40303 254 aaKnown RBP1.2□□□□□ -2.22
RPB11YOL005C ICE2P40499 491 aa1.2□□□□□ -2.22
RPB11YOL005C AGE2P40529 298 aa1.2□□□□□ -2.22
RPB11YOL005C NOP19P53317 196 aaPredicted RBP1.2□□□□□ -2.22
RPB11YOL005C SNZ1Q03148 297 aa1.2□□□□□ -2.22
RPB11YOL005C GAS3Q03655 524 aa1.2□□□□□ -2.22
RPB11YOL005C YML108WQ03759 105 aa1.2□□□□□ -2.22
RPB11YOL005C YOR342CQ12182 319 aa1.2□□□□□ -2.22
RPB11YOL005C USB1Q12208 290 aaKnown RBP1.2□□□□□ -2.22
RPB11YOL005C PSF1Q12488 208 aa1.2□□□□□ -2.22
RPB11YOL005C Q0144Q9ZZW2 109 aa1.2□□□□□ -2.22
RPB11YOL005C MEC1P38111 2368 aa1.2□□□□□ -2.22
RPB11YOL005C FLO9P39712 1322 aa1.19□□□□□ -2.22
RPB11YOL005C FAS1P07149 2051 aaKnown RBP1.19□□□□□ -2.22
RPB11YOL005C TIM9O74700 87 aa1.19□□□□□ -2.22
RPB11YOL005C CDC28P00546 298 aaKnown RBP1.19□□□□□ -2.22
RPB11YOL005C CDC7P06243 507 aa1.19□□□□□ -2.22
RPB11YOL005C YOL162WP0CF19 215 aa1.19□□□□□ -2.22
RPB11YOL005C ARC19P33204 171 aaKnown RBP1.19□□□□□ -2.22
RPB11YOL005C LHP1P33399 275 aaKnown RBP1.19□□□□□ -2.22
RPB11YOL005C RPS1AP33442 255 aaKnown RBP1.19□□□□□ -2.22
RPB11YOL005C YKR045CP36138 183 aa1.19□□□□□ -2.22
RPB11YOL005C YCR087C-AP37263 153 aa1.19□□□□□ -2.22
RPB11YOL005C YBR219CP38317 127 aa1.19□□□□□ -2.22
RPB11YOL005C RGI1P40043 161 aaPredicted RBP1.19□□□□□ -2.22
RPB11YOL005C ALB1P47019 175 aaPredicted RBP1.19□□□□□ -2.22
RPB11YOL005C ADO1P47143 340 aaKnown RBP1.19□□□□□ -2.22
RPB11YOL005C YNR062CP53748 327 aa1.19□□□□□ -2.22
RPB11YOL005C CUS2P53830 285 aaPredicted RBP1.19□□□□□ -2.22
RPB11YOL005C LPP1Q04396 274 aa1.19□□□□□ -2.22
RPB11YOL005C LSO2Q3E772 92 aaKnown RBP1.19□□□□□ -2.22
RPB11YOL005C YKL068W-AQ3E826 78 aa1.19□□□□□ -2.22
RPB11YOL005C CDC39P25655 2108 aaKnown RBP1.18□□□□□ -2.22
RPB11YOL005C DDI2P0CH63 225 aa1.18□□□□□ -2.22
RPB11YOL005C DDI3P0CH64 225 aa1.18□□□□□ -2.22
RPB11YOL005C YHR214C-DP0CX93 97 aa1.18□□□□□ -2.22
RPB11YOL005C MER1P16523 270 aa1.18□□□□□ -2.22
RPB11YOL005C DBF2P22204 572 aa1.18□□□□□ -2.22
RPB11YOL005C STP22P25604 385 aa1.18□□□□□ -2.22
RPB11YOL005C MRPL17P36528 281 aa1.18□□□□□ -2.22
RPB11YOL005C YBR032WP38223 100 aa1.18□□□□□ -2.22
RPB11YOL005C IRC22P40006 225 aa1.18□□□□□ -2.22
RPB11YOL005C SOK1P40317 901 aa1.18□□□□□ -2.22
RPB11YOL005C PGD1P40356 397 aa1.18□□□□□ -2.22
RPB11YOL005C HPM1P40481 377 aa1.18□□□□□ -2.22
RPB11YOL005C APS3P47064 194 aa1.18□□□□□ -2.22
RPB11YOL005C PAC10P48363 199 aa1.18□□□□□ -2.22
RPB11YOL005C BXI1P48558 297 aa1.18□□□□□ -2.22
RPB11YOL005C RPS12P48589 143 aaKnown RBP1.18□□□□□ -2.22
RPB11YOL005C BRR6P53062 197 aa1.18□□□□□ -2.22
RPB11YOL005C YLR460CP54007 376 aa1.18□□□□□ -2.22
RPB11YOL005C RPL22BP56628 122 aaKnown RBP1.18□□□□□ -2.22
RPB11YOL005C YDR476CQ03362 224 aa1.18□□□□□ -2.22
RPB11YOL005C YDR248CQ03786 193 aa1.18□□□□□ -2.22
RPB11YOL005C YOL131WQ08270 108 aa1.18□□□□□ -2.22
RPB11YOL005C GET4Q12125 312 aa1.18□□□□□ -2.22
RPB11YOL005C JLP1Q12358 412 aa1.18□□□□□ -2.22
RPB11YOL005C DCN1Q12395 269 aa1.18□□□□□ -2.22
RPB11YOL005C YKL018C-AQ3E7A7 99 aa1.18□□□□□ -2.22
RPB11YOL005C TDA8Q6B2U8 126 aa1.18□□□□□ -2.22
RPB11YOL005C YLR156WP0CE96 114 aa1.17□□□□□ -2.22
RPB11YOL005C YLR159WP0CE97 114 aa1.17□□□□□ -2.22
RPB11YOL005C YLR161WP0CE98 114 aa1.17□□□□□ -2.22
RPB11YOL005C NHP6BP11633 99 aaKnown RBP1.17□□□□□ -2.22
RPB11YOL005C MRPS28P21771 286 aa1.17□□□□□ -2.22
RPB11YOL005C PBN1P25580 416 aa1.17□□□□□ -2.22
RPB11YOL005C NTG1P31378 399 aa1.17□□□□□ -2.22
RPB11YOL005C SRY1P36007 326 aa1.17□□□□□ -2.22
RPB11YOL005C CAF4P36130 643 aa1.17□□□□□ -2.22
RPB11YOL005C TRM5P38793 499 aa1.17□□□□□ -2.22
RPB11YOL005C NSG1P38837 291 aa1.17□□□□□ -2.22
RPB11YOL005C MTW1P39731 289 aa1.17□□□□□ -2.22
RPB11YOL005C TIR3P40552 269 aa1.17□□□□□ -2.22
RPB11YOL005C SWP1Q02795 286 aa1.17□□□□□ -2.22
RPB11YOL005C NCE101Q02820 53 aa1.17□□□□□ -2.22
RPB11YOL005C FMN1Q03778 218 aa1.17□□□□□ -2.22
RPB11YOL005C YDR102CQ03864 110 aa1.17□□□□□ -2.22
RPB11YOL005C ADF1Q2V2Q1 113 aa1.17□□□□□ -2.22
RPB11YOL005C SLH1P53327 1967 aaKnown RBP1.17□□□□□ -2.22
RPB11YOL005C RPL35AP0CX84 120 aaKnown RBP1.16□□□□□ -2.22
RPB11YOL005C RPL35BP0CX85 120 aaKnown RBP1.16□□□□□ -2.22
RPB11YOL005C HSP30P25619 332 aa1.16□□□□□ -2.22
RPB11YOL005C NUF2P33895 451 aa1.16□□□□□ -2.22
RPB11YOL005C CBT1P36038 271 aaPredicted RBP1.16□□□□□ -2.22
RPB11YOL005C SKG1P36169 355 aa1.16□□□□□ -2.22
RPB11YOL005C MRPL28P36527 147 aa1.16□□□□□ -2.22
RPB11YOL005C YNL217WP40152 326 aa1.16□□□□□ -2.22
RPB11YOL005C RFC4P40339 323 aaKnown RBP1.16□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 128.5 ms