RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C HFA1P32874 2273 aa7.29□□□□□ -1.24
RPD3YNL330C RPB10P22139 70 aa7.28□□□□□ -1.24
RPD3YNL330C YEL057CP39983 233 aa7.28□□□□□ -1.24
RPD3YNL330C GPI2P46961 280 aa7.28□□□□□ -1.24
RPD3YNL330C TMA10Q06177 86 aa7.28□□□□□ -1.24
RPD3YNL330C YIL134C-AQ45U18 67 aa7.28□□□□□ -1.24
RPD3YNL330C FUN14P18411 198 aa7.27□□□□□ -1.24
RPD3YNL330C REC104P33323 182 aa7.27□□□□□ -1.24
RPD3YNL330C CYB5P40312 120 aa7.27□□□□□ -1.24
RPD3YNL330C HIT1P46973 164 aa7.27□□□□□ -1.24
RPD3YNL330C YGR149WP48236 432 aa7.27□□□□□ -1.24
RPD3YNL330C OST3P48439 350 aa7.27□□□□□ -1.24
RPD3YNL330C BOR1P53838 576 aa7.27□□□□□ -1.24
RPD3YNL330C YPL077CQ02831 240 aa7.27□□□□□ -1.24
RPD3YNL330C ATC1Q04005 294 aa7.27□□□□□ -1.24
RPD3YNL330C STP4Q07351 490 aa7.27□□□□□ -1.24
RPD3YNL330C YPR071WQ12346 211 aa7.27□□□□□ -1.24
RPD3YNL330C PAA1Q12447 191 aaKnown RBP7.27□□□□□ -1.24
RPD3YNL330C YGL258W-AQ3E740 77 aa7.27□□□□□ -1.24
RPD3YNL330C YGL010WP25338 174 aa7.27□□□□□ -1.25
RPD3YNL330C HMX1P32339 317 aa7.27□□□□□ -1.25
RPD3YNL330C MRPL11P36521 249 aaPredicted RBP7.27□□□□□ -1.25
RPD3YNL330C DER1P38307 211 aa7.27□□□□□ -1.25
RPD3YNL330C YMR262WP38430 313 aa7.27□□□□□ -1.25
RPD3YNL330C UME6P39001 836 aa7.27□□□□□ -1.25
RPD3YNL330C SIP18P50263 79 aa7.27□□□□□ -1.25
RPD3YNL330C CRH1P53301 507 aa7.27□□□□□ -1.25
RPD3YNL330C LPP1Q04396 274 aa7.27□□□□□ -1.25
RPD3YNL330C NAT3Q06504 195 aa7.27□□□□□ -1.25
RPD3YNL330C LOA1Q06508 300 aa7.27□□□□□ -1.25
RPD3YNL330C MHR1Q06630 226 aa7.27□□□□□ -1.25
RPD3YNL330C ATX2Q12067 313 aa7.27□□□□□ -1.25
RPD3YNL330C ATG15P25641 520 aa7.26□□□□□ -1.25
RPD3YNL330C GAR1P28007 205 aaKnown RBP7.26□□□□□ -1.25
RPD3YNL330C YOX1P34161 385 aa7.26□□□□□ -1.25
RPD3YNL330C CPR5P35176 225 aa7.26□□□□□ -1.25
RPD3YNL330C ECM18Q04623 453 aa7.26□□□□□ -1.25
RPD3YNL330C LDS2Q08218 356 aa7.26□□□□□ -1.25
RPD3YNL330C POC4Q12245 148 aaPredicted RBP7.26□□□□□ -1.25
RPD3YNL330C DAD2P36162 133 aa7.25□□□□□ -1.25
RPD3YNL330C CUE1P38428 203 aa7.25□□□□□ -1.25
RPD3YNL330C MIC27P50945 234 aa7.25□□□□□ -1.25
RPD3YNL330C SHH3Q04487 196 aa7.25□□□□□ -1.25
RPD3YNL330C RFM1Q12192 310 aa7.25□□□□□ -1.25
RPD3YNL330C FYV7Q12247 151 aa7.25□□□□□ -1.25
RPD3YNL330C SMT3Q12306 101 aaKnown RBP7.25□□□□□ -1.25
RPD3YNL330C ERG27Q12452 347 aaKnown RBP7.25□□□□□ -1.25
RPD3YNL330C RPL9AP05738 191 aaKnown RBP7.24□□□□□ -1.25
RPD3YNL330C ILV5P06168 395 aaKnown RBP7.24□□□□□ -1.25
RPD3YNL330C RNA15P25299 296 aaPredicted RBP7.24□□□□□ -1.25
RPD3YNL330C RPB11P38902 120 aa7.24□□□□□ -1.25
RPD3YNL330C PIC2P40035 300 aa7.24□□□□□ -1.25
RPD3YNL330C GON7P46984 123 aa7.24□□□□□ -1.25
RPD3YNL330C YJR015WP47090 510 aa7.24□□□□□ -1.25
RPD3YNL330C UBC13P52490 153 aa7.24□□□□□ -1.25
RPD3YNL330C DYN2Q02647 92 aa7.24□□□□□ -1.25
RPD3YNL330C ARR2Q06597 130 aa7.24□□□□□ -1.25
RPD3YNL330C POM34Q12445 299 aa7.24□□□□□ -1.25
RPD3YNL330C TRP4P07285 380 aaPredicted RBP7.23□□□□□ -1.25
RPD3YNL330C SUA7P29055 345 aaPredicted RBP7.23□□□□□ -1.25
RPD3YNL330C SPS18P32572 300 aa7.23□□□□□ -1.25
RPD3YNL330C RPL9BP51401 191 aaKnown RBP7.23□□□□□ -1.25
RPD3YNL330C MCH1Q07376 486 aa7.23□□□□□ -1.25
RPD3YNL330C YOR105WQ08504 108 aa7.23□□□□□ -1.25
RPD3YNL330C POR1P04840 283 aaKnown RBP7.22□□□□□ -1.25
RPD3YNL330C STE4P18851 423 aa7.22□□□□□ -1.25
RPD3YNL330C LDB16P25587 256 aa7.22□□□□□ -1.25
RPD3YNL330C SRP21P32342 167 aa7.22□□□□□ -1.25
RPD3YNL330C TCA17P32613 152 aa7.22□□□□□ -1.25
RPD3YNL330C DFG10P40526 253 aa7.22□□□□□ -1.25
RPD3YNL330C SAS2P40963 338 aa7.22□□□□□ -1.25
RPD3YNL330C RPN14P53196 417 aa7.22□□□□□ -1.25
RPD3YNL330C HEM4P06174 275 aa7.21□□□□□ -1.26
RPD3YNL330C ATP5P09457 212 aa7.21□□□□□ -1.26
RPD3YNL330C TOM40P23644 387 aaKnown RBP7.21□□□□□ -1.26
RPD3YNL330C FPR2P32472 135 aa7.21□□□□□ -1.26
RPD3YNL330C RPS26AP39938 119 aaKnown RBP7.21□□□□□ -1.26
RPD3YNL330C RPS26BP39939 119 aaKnown RBP7.21□□□□□ -1.26
RPD3YNL330C SEC24P40482 926 aaKnown RBP7.21□□□□□ -1.26
RPD3YNL330C DSK2P48510 373 aa7.21□□□□□ -1.26
RPD3YNL330C RPL21AQ02753 160 aaKnown RBP7.21□□□□□ -1.26
RPD3YNL330C RNH203Q12338 110 aa7.21□□□□□ -1.26
RPD3YNL330C RPL21BQ12672 160 aaKnown RBP7.21□□□□□ -1.26
RPD3YNL330C YDL085C-AQ3E7B7 68 aaKnown RBP7.21□□□□□ -1.26
RPD3YNL330C MRS3P10566 314 aa7.2□□□□□ -1.26
RPD3YNL330C YBR184WP38299 523 aa7.2□□□□□ -1.26
RPD3YNL330C SSU72P53538 206 aaPredicted RBP7.2□□□□□ -1.26
RPD3YNL330C MRL1Q06815 381 aa7.2□□□□□ -1.26
RPD3YNL330C YOS1Q3E834 85 aa7.2□□□□□ -1.26
RPD3YNL330C RPS2P25443 254 aaKnown RBP7.19□□□□□ -1.26
RPD3YNL330C RAD23P32628 398 aaKnown RBP7.19□□□□□ -1.26
RPD3YNL330C POM33Q12164 279 aa7.19□□□□□ -1.26
RPD3YNL330C FOL3Q12676 427 aaPredicted RBP7.19□□□□□ -1.26
RPD3YNL330C FMP27Q06179 2628 aa7.18□□□□□ -1.26
RPD3YNL330C PHD1P36093 366 aa7.18□□□□□ -1.26
RPD3YNL330C SRP14P38985 146 aa7.18□□□□□ -1.26
RPD3YNL330C YAR068WP39564 161 aa7.18□□□□□ -1.26
RPD3YNL330C YIL163CP40448 117 aa7.18□□□□□ -1.26
RPD3YNL330C SAE3P89114 91 aa7.18□□□□□ -1.26
RPD3YNL330C YDR114CQ04597 100 aa7.18□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms