RNA–Protein interactions for RNA: YNL325C

FIG4, Transcript of Phosphatidylinositol 3,5-bisphosphate (PtdIns[3,5]P) phosphatase, yeast

Gene FIG4, Length 2,640 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FIG4	YNL325C	YGL010W	P25338	174 aa		0.7	□□□□□ -2.3
FIG4	YNL325C	RFA3	P26755	122 aa	Known RBP	0.7	□□□□□ -2.3
FIG4	YNL325C	YCR087C-A	P37263	153 aa		0.7	□□□□□ -2.3
FIG4	YNL325C	GAA1	P39012	614 aa		0.7	□□□□□ -2.3
FIG4	YNL325C	GLE2	P40066	365 aa		0.7	□□□□□ -2.3
FIG4	YNL325C	GVP36	P40531	326 aa	Known RBP	0.7	□□□□□ -2.3
FIG4	YNL325C	YMD8	Q03697	442 aa		0.7	□□□□□ -2.3
FIG4	YNL325C	GRX8	Q05926	109 aa		0.7	□□□□□ -2.3
FIG4	YNL325C	GPM2	Q12008	311 aa		0.7	□□□□□ -2.3
FIG4	YNL325C	JLP1	Q12358	412 aa		0.7	□□□□□ -2.3
FIG4	YNL325C	SIR2	P06700	562 aa		0.7	□□□□□ -2.3
FIG4	YNL325C	KSS1	P14681	368 aa		0.7	□□□□□ -2.3
FIG4	YNL325C	STE18	P18852	110 aa		0.7	□□□□□ -2.3
FIG4	YNL325C	CNB1	P25296	175 aa		0.7	□□□□□ -2.3
FIG4	YNL325C	ATG22	P25568	528 aa		0.7	□□□□□ -2.3
FIG4	YNL325C	ASF2	P32448	525 aa	Predicted RBP	0.7	□□□□□ -2.3
FIG4	YNL325C	CBT1	P36038	271 aa	Predicted RBP	0.7	□□□□□ -2.3
FIG4	YNL325C	MRPL28	P36527	147 aa		0.7	□□□□□ -2.3
FIG4	YNL325C	YNL194C	P40169	301 aa		0.7	□□□□□ -2.3
FIG4	YNL325C	AGE2	P40529	298 aa		0.7	□□□□□ -2.3
FIG4	YNL325C	YFR054C	P43622	192 aa		0.7	□□□□□ -2.3
FIG4	YNL325C	YNR077C	P53758	84 aa		0.7	□□□□□ -2.3
FIG4	YNL325C	CUS2	P53830	285 aa	Predicted RBP	0.7	□□□□□ -2.3
FIG4	YNL325C	LSM7	P53905	115 aa	Known RBP	0.7	□□□□□ -2.3
FIG4	YNL325C	TDA8	Q6B2U8	126 aa		0.7	□□□□□ -2.3
FIG4	YNL325C	YOR032W-A	Q8TGS1	66 aa		0.7	□□□□□ -2.3
FIG4	YNL325C	MDM35	O60200	86 aa		0.69	□□□□□ -2.3
FIG4	YNL325C	TIM9	O74700	87 aa		0.69	□□□□□ -2.3
FIG4	YNL325C	RPL2A	P0CX45	254 aa	Known RBP	0.69	□□□□□ -2.3
FIG4	YNL325C	RPL2B	P0CX46	254 aa	Known RBP	0.69	□□□□□ -2.3
FIG4	YNL325C	SNC2	P33328	115 aa		0.69	□□□□□ -2.3
FIG4	YNL325C	FMP23	P38231	175 aa		0.69	□□□□□ -2.3
FIG4	YNL325C	YNL217W	P40152	326 aa		0.69	□□□□□ -2.3
FIG4	YNL325C	MZM1	Q03429	123 aa	Predicted RBP	0.69	□□□□□ -2.3
FIG4	YNL325C	ADF1	Q2V2Q1	113 aa		0.69	□□□□□ -2.3
FIG4	YNL325C	YGR035W-A	Q45U48	73 aa		0.69	□□□□□ -2.3
FIG4	YNL325C	MER1	P16523	270 aa		0.69	□□□□□ -2.3
FIG4	YNL325C	MAG1	P22134	296 aa	Known RBP	0.69	□□□□□ -2.3
FIG4	YNL325C	NTG1	P31378	399 aa		0.69	□□□□□ -2.3
FIG4	YNL325C	FZF1	P32805	299 aa		0.69	□□□□□ -2.3
FIG4	YNL325C	TMA19	P35691	167 aa	Known RBP	0.69	□□□□□ -2.3
FIG4	YNL325C	YET1	P35723	206 aa		0.69	□□□□□ -2.3
FIG4	YNL325C	YKT6	P36015	200 aa	Known RBP	0.69	□□□□□ -2.3
FIG4	YNL325C	TCD1	P38756	429 aa		0.69	□□□□□ -2.3
FIG4	YNL325C	VMA22	P38784	181 aa		0.69	□□□□□ -2.3
FIG4	YNL325C	AST2	P39945	430 aa	Known RBP	0.69	□□□□□ -2.3
FIG4	YNL325C	MRPS17	Q03246	237 aa	Predicted RBP	0.69	□□□□□ -2.3
FIG4	YNL325C	ANT1	Q06497	328 aa		0.69	□□□□□ -2.3
FIG4	YNL325C	CSI2	Q08054	341 aa		0.69	□□□□□ -2.3
FIG4	YNL325C	RPL28	P02406	149 aa	Known RBP	0.68	□□□□□ -2.3
FIG4	YNL325C	URA5	P13298	226 aa	Known RBP	0.68	□□□□□ -2.3
FIG4	YNL325C	YKR045C	P36138	183 aa		0.68	□□□□□ -2.3
FIG4	YNL325C	YBR219C	P38317	127 aa		0.68	□□□□□ -2.3
FIG4	YNL325C	YBR285W	P38354	144 aa		0.68	□□□□□ -2.3
FIG4	YNL325C	YER034W	P40022	185 aa	Known RBP	0.68	□□□□□ -2.3
FIG4	YNL325C	YFR035C	P43608	114 aa		0.68	□□□□□ -2.3
FIG4	YNL325C	SKI6	P46948	246 aa	Predicted RBP	0.68	□□□□□ -2.3
FIG4	YNL325C	SNZ1	Q03148	297 aa		0.68	□□□□□ -2.3
FIG4	YNL325C	ABP140	Q08641	628 aa	Known RBP	0.68	□□□□□ -2.3
FIG4	YNL325C	YPL162C	Q12042	273 aa		0.68	□□□□□ -2.3
FIG4	YNL325C	GIS3	Q12418	502 aa		0.68	□□□□□ -2.3
FIG4	YNL325C	YFR032C-B	Q8TGU2	87 aa		0.68	□□□□□ -2.3
FIG4	YNL325C	PHO85	P17157	305 aa		0.68	□□□□□ -2.3
FIG4	YNL325C	MRPS28	P21771	286 aa		0.68	□□□□□ -2.3
FIG4	YNL325C	BET1	P22804	142 aa		0.68	□□□□□ -2.3
FIG4	YNL325C	OCH1	P31755	480 aa		0.68	□□□□□ -2.3
FIG4	YNL325C	YMR315W	Q04869	349 aa	Known RBP	0.68	□□□□□ -2.3
FIG4	YNL325C	ODC2	Q99297	307 aa		0.68	□□□□□ -2.3
FIG4	YNL325C	ATG40	Q99325	256 aa		0.68	□□□□□ -2.3
FIG4	YNL325C	RPL25	P04456	142 aa	Known RBP	0.68	□□□□□ -2.3
FIG4	YNL325C	MGM101	P32787	269 aa	Known RBP	0.68	□□□□□ -2.3
FIG4	YNL325C	YBR209W	P38311	105 aa		0.68	□□□□□ -2.3
FIG4	YNL325C	RPL13B	P40212	199 aa	Known RBP	0.68	□□□□□ -2.3
FIG4	YNL325C	MPC3	P53311	146 aa		0.68	□□□□□ -2.3
FIG4	YNL325C	ARO80	Q04052	950 aa		0.68	□□□□□ -2.3
FIG4	YNL325C	RPL13A	Q12690	199 aa	Predicted RBP	0.68	□□□□□ -2.3
FIG4	YNL325C	TRA1	P38811	3744 aa		0.67	□□□□□ -2.3
FIG4	YNL325C	QCR7	P00128	127 aa		0.67	□□□□□ -2.3
FIG4	YNL325C	RPL27A	P0C2H6	136 aa	Known RBP	0.67	□□□□□ -2.3
FIG4	YNL325C	TFC1	P32367	649 aa		0.67	□□□□□ -2.3
FIG4	YNL325C	UBC6	P33296	250 aa	Predicted RBP	0.67	□□□□□ -2.3
FIG4	YNL325C	VTC1	P40046	129 aa	RIP-Chip data	0.67	□□□□□ -2.3	not detected
FIG4	YNL325C	KNH1	P50112	268 aa		0.67	□□□□□ -2.3
FIG4	YNL325C	UBC12	P52491	188 aa		0.67	□□□□□ -2.3
FIG4	YNL325C	CWC21	Q03375	135 aa	Known RBP	0.67	□□□□□ -2.3
FIG4	YNL325C	BNA7	Q04066	261 aa		0.67	□□□□□ -2.3
FIG4	YNL325C	YLR236C	A0A023PZG4	107 aa		0.67	□□□□□ -2.3
FIG4	YNL325C	MRS1	P07266	363 aa		0.67	□□□□□ -2.3
FIG4	YNL325C	YOL162W	P0CF19	215 aa		0.67	□□□□□ -2.3
FIG4	YNL325C	TRM5	P38793	499 aa		0.67	□□□□□ -2.3
FIG4	YNL325C	NOP19	P53317	196 aa	Predicted RBP	0.67	□□□□□ -2.3
FIG4	YNL325C	YMR226C	Q05016	267 aa	Known RBP	0.67	□□□□□ -2.3
FIG4	YNL325C	RIO1	Q12196	484 aa	Known RBP	0.67	□□□□□ -2.3
FIG4	YNL325C	YHR214C-E	Q8TGK0	99 aa		0.67	□□□□□ -2.3
FIG4	YNL325C	HTB1	P02293	131 aa	Known RBP	0.66	□□□□□ -2.3
FIG4	YNL325C	HTB2	P02294	131 aa		0.66	□□□□□ -2.3
FIG4	YNL325C	CPA1	P07258	411 aa	Known RBP	0.66	□□□□□ -2.3
FIG4	YNL325C	SEC11	P15367	167 aa		0.66	□□□□□ -2.3
FIG4	YNL325C	ADE1	P27616	306 aa		0.66	□□□□□ -2.3
FIG4	YNL325C	PTM1	P32857	523 aa		0.66	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms