RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeastyeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SQS1YNL224C YMR252CQ04814 134 aa2.85□□□□□ -1.95
SQS1YNL224C ASM4Q05166 528 aa2.85□□□□□ -1.95
SQS1YNL224C SNX3Q08826 162 aaKnown RBP2.85□□□□□ -1.95
SQS1YNL224C YNL277W-AQ3E7Z0 62 aa2.85□□□□□ -1.95
SQS1YNL224C SEC4P07560 215 aaKnown RBP2.84□□□□□ -1.95
SQS1YNL224C INM1P38710 295 aa2.84□□□□□ -1.95
SQS1YNL224C RPB11P38902 120 aa2.84□□□□□ -1.95
SQS1YNL224C ARP3P47117 449 aaKnown RBP2.84□□□□□ -1.95
SQS1YNL224C SCW4P53334 386 aaKnown RBP2.84□□□□□ -1.95
SQS1YNL224C YMR082CQ04276 118 aa2.84□□□□□ -1.95
SQS1YNL224C YML053CQ04978 212 aa2.84□□□□□ -1.95
SQS1YNL224C EAF3Q12432 401 aa2.84□□□□□ -1.95
SQS1YNL224C YRF1-2P40105 1681 aa2.84□□□□□ -1.96
SQS1YNL224C TY3B-GQ99315 1547 aa2.84□□□□□ -1.96
SQS1YNL224C YHR139C-AO13536 103 aa2.84□□□□□ -1.96
SQS1YNL224C RPS31P05759 152 aaKnown RBP2.84□□□□□ -1.96
SQS1YNL224C CKS1P20486 150 aaKnown RBP2.84□□□□□ -1.96
SQS1YNL224C NUD1P32336 851 aa2.84□□□□□ -1.96
SQS1YNL224C UTR5P32630 166 aa2.84□□□□□ -1.96
SQS1YNL224C REC114P32841 428 aa2.84□□□□□ -1.96
SQS1YNL224C YIL165CP40446 119 aa2.84□□□□□ -1.96
SQS1YNL224C YIL012WP40551 113 aa2.84□□□□□ -1.96
SQS1YNL224C BUD13P46947 266 aaPredicted RBP2.84□□□□□ -1.96
SQS1YNL224C YGL034CP53186 121 aa2.84□□□□□ -1.96
SQS1YNL224C LSM3P57743 89 aaKnown RBP2.84□□□□□ -1.96
SQS1YNL224C YDR209CQ03480 137 aa2.84□□□□□ -1.96
SQS1YNL224C GAS3Q03655 524 aa2.84□□□□□ -1.96
SQS1YNL224C UTP15Q04305 513 aaKnown RBP2.84□□□□□ -1.96
SQS1YNL224C NMA1Q06178 401 aaKnown RBP2.84□□□□□ -1.96
SQS1YNL224C FIT3Q08907 204 aa2.84□□□□□ -1.96
SQS1YNL224C MRH1Q12117 320 aaPredicted RBP2.84□□□□□ -1.96
SQS1YNL224C SME1Q12330 94 aaPredicted RBP2.84□□□□□ -1.96
SQS1YNL224C RPA190P10964 1664 aaKnown RBP2.83□□□□□ -1.96
SQS1YNL224C COX5AP00424 153 aa2.83□□□□□ -1.96
SQS1YNL224C RAS2P01120 322 aaKnown RBP2.83□□□□□ -1.96
SQS1YNL224C HEM4P06174 275 aa2.83□□□□□ -1.96
SQS1YNL224C RPL30P14120 105 aaKnown RBP2.83□□□□□ -1.96
SQS1YNL224C MRP17P28778 131 aa2.83□□□□□ -1.96
SQS1YNL224C VMA11P32842 164 aa2.83□□□□□ -1.96
SQS1YNL224C MRPS9P38120 278 aa2.83□□□□□ -1.96
SQS1YNL224C ARN2P38724 620 aa2.83□□□□□ -1.96
SQS1YNL224C FIP1P45976 327 aa2.83□□□□□ -1.96
SQS1YNL224C ATG27P46989 271 aa2.83□□□□□ -1.96
SQS1YNL224C KNH1P50112 268 aa2.83□□□□□ -1.96
SQS1YNL224C CPD1P53314 239 aa2.83□□□□□ -1.96
SQS1YNL224C TDA7P53882 636 aaPredicted RBP2.83□□□□□ -1.96
SQS1YNL224C RSM10Q03201 203 aa2.83□□□□□ -1.96
SQS1YNL224C YPR098CQ06089 161 aa2.83□□□□□ -1.96
SQS1YNL224C RRG7Q08774 242 aaPredicted RBP2.83□□□□□ -1.96
SQS1YNL224C YOR376W-AQ3E805 51 aa2.83□□□□□ -1.96
SQS1YNL224C URA10P30402 227 aa2.82□□□□□ -1.96
SQS1YNL224C ALK2P32789 676 aaPredicted RBP2.82□□□□□ -1.96
SQS1YNL224C ZRT3P34240 503 aa2.82□□□□□ -1.96
SQS1YNL224C YKL102CP34249 101 aa2.82□□□□□ -1.96
SQS1YNL224C SWD2P36104 329 aaPredicted RBP2.82□□□□□ -1.96
SQS1YNL224C PAM17P36147 197 aa2.82□□□□□ -1.96
SQS1YNL224C YNL198CP40166 100 aa2.82□□□□□ -1.96
SQS1YNL224C FLX1P40464 311 aa2.82□□□□□ -1.96
SQS1YNL224C YFR045WP43617 309 aa2.82□□□□□ -1.96
SQS1YNL224C AIM25P47140 327 aa2.82□□□□□ -1.96
SQS1YNL224C SWS2P53937 143 aa2.82□□□□□ -1.96
SQS1YNL224C UPS1Q05776 175 aa2.82□□□□□ -1.96
SQS1YNL224C FCY1Q12178 158 aa2.82□□□□□ -1.96
SQS1YNL224C MHF1Q3E835 90 aa2.82□□□□□ -1.96
SQS1YNL224C DOP1Q03921 1698 aa2.82□□□□□ -1.96
SQS1YNL224C PBI2P0CT04 75 aaKnown RBP2.82□□□□□ -1.96
SQS1YNL224C MRS3P10566 314 aa2.82□□□□□ -1.96
SQS1YNL224C TFS1P14306 219 aa2.82□□□□□ -1.96
SQS1YNL224C MKK1P32490 508 aa2.82□□□□□ -1.96
SQS1YNL224C ZRT1P32804 376 aa2.82□□□□□ -1.96
SQS1YNL224C YJL213WP40896 331 aa2.82□□□□□ -1.96
SQS1YNL224C GEP7P53171 287 aa2.82□□□□□ -1.96
SQS1YNL224C ERG26P53199 349 aaKnown RBP2.82□□□□□ -1.96
SQS1YNL224C YNL033WP53964 284 aa2.82□□□□□ -1.96
SQS1YNL224C YNL019CP53975 284 aa2.82□□□□□ -1.96
SQS1YNL224C SHH4Q06236 168 aa2.82□□□□□ -1.96
SQS1YNL224C GAT3Q07928 141 aa2.82□□□□□ -1.96
SQS1YNL224C POC4Q12245 148 aaPredicted RBP2.82□□□□□ -1.96
SQS1YNL224C JID1Q12350 301 aa2.82□□□□□ -1.96
SQS1YNL224C BOL1Q3E793 110 aa2.82□□□□□ -1.96
SQS1YNL224C COA6Q3E846 104 aa2.82□□□□□ -1.96
SQS1YNL224C RIF1P29539 1916 aa2.82□□□□□ -1.96
SQS1YNL224C MBB1P39534 108 aa2.81□□□□□ -1.96
SQS1YNL224C MST27P53176 234 aa2.81□□□□□ -1.96
SQS1YNL224C BUD25P85052 153 aa2.81□□□□□ -1.96
SQS1YNL224C YPL039WQ03080 316 aa2.81□□□□□ -1.96
SQS1YNL224C GPI19Q04082 140 aa2.81□□□□□ -1.96
SQS1YNL224C YOL160WQ08321 113 aa2.81□□□□□ -1.96
SQS1YNL224C YOR097CQ12274 175 aaPredicted RBP2.81□□□□□ -1.96
SQS1YNL224C DUR1,2P32528 1835 aaKnown RBP2.81□□□□□ -1.96
SQS1YNL224C TY4B-JP47024 1803 aa2.81□□□□□ -1.96
SQS1YNL224C ACB1P31787 87 aa2.81□□□□□ -1.96
SQS1YNL224C YHR138CP38841 114 aaPredicted RBP2.81□□□□□ -1.96
SQS1YNL224C YNL195CP40168 261 aa2.81□□□□□ -1.96
SQS1YNL224C MPM1P40364 252 aa2.81□□□□□ -1.96
SQS1YNL224C TTI2P47168 421 aa2.81□□□□□ -1.96
SQS1YNL224C ARR3Q06598 404 aa2.81□□□□□ -1.96
SQS1YNL224C RFM1Q12192 310 aa2.81□□□□□ -1.96
SQS1YNL224C KTI11Q3E840 82 aa2.81□□□□□ -1.96
SQS1YNL224C KSH1Q8TGJ3 72 aa2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 71.3 ms