RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C RPL30P14120 105 aaKnown RBP2.84□□□□□ -1.95
SSO2YMR183C CCA1P21269 546 aa2.84□□□□□ -1.95
SSO2YMR183C STP22P25604 385 aa2.84□□□□□ -1.95
SSO2YMR183C XPT1P47165 209 aa2.84□□□□□ -1.95
SSO2YMR183C ORM1P53224 222 aa2.84□□□□□ -1.95
SSO2YMR183C ALG9P53868 555 aaKnown RBP2.84□□□□□ -1.95
SSO2YMR183C DAS2Q12084 232 aa2.84□□□□□ -1.95
SSO2YMR183C MCP1Q12106 302 aa2.84□□□□□ -1.95
SSO2YMR183C DGK1Q12382 290 aa2.84□□□□□ -1.95
SSO2YMR183C YOL085CQ99345 113 aa2.84□□□□□ -1.95
SSO2YMR183C YBT1P32386 1661 aa2.84□□□□□ -1.95
SSO2YMR183C SGA1P08019 549 aa2.83□□□□□ -1.96
SSO2YMR183C TOM40P23644 387 aaKnown RBP2.83□□□□□ -1.96
SSO2YMR183C NSG1P38837 291 aa2.83□□□□□ -1.96
SSO2YMR183C DLS1P40366 167 aa2.83□□□□□ -1.96
SSO2YMR183C SER2P42941 309 aa2.83□□□□□ -1.96
SSO2YMR183C TDA4P47153 279 aa2.83□□□□□ -1.96
SSO2YMR183C TTI2P47168 421 aa2.83□□□□□ -1.96
SSO2YMR183C FMN1Q03778 218 aa2.83□□□□□ -1.96
SSO2YMR183C YMR320WQ04897 101 aa2.83□□□□□ -1.96
SSO2YMR183C YDR278CQ05612 105 aa2.83□□□□□ -1.96
SSO2YMR183C HRD1Q08109 551 aa2.83□□□□□ -1.96
SSO2YMR183C YOL014WQ08110 124 aa2.83□□□□□ -1.96
SSO2YMR183C SLO1Q3E784 85 aa2.83□□□□□ -1.96
SSO2YMR183C YML100W-AQ8TGT0 57 aa2.83□□□□□ -1.96
SSO2YMR183C Q0144Q9ZZW2 109 aa2.83□□□□□ -1.96
SSO2YMR183C AUS1Q08409 1394 aa2.83□□□□□ -1.96
SSO2YMR183C REP2P03872 296 aa2.82□□□□□ -1.96
SSO2YMR183C VMA11P32842 164 aa2.82□□□□□ -1.96
SSO2YMR183C YHR125WP38831 101 aa2.82□□□□□ -1.96
SSO2YMR183C FCY21P40039 528 aa2.82□□□□□ -1.96
SSO2YMR183C YPL073CP40323 161 aa2.82□□□□□ -1.96
SSO2YMR183C CCC1P47818 322 aa2.82□□□□□ -1.96
SSO2YMR183C TIM8P57744 87 aa2.82□□□□□ -1.96
SSO2YMR183C SMD1Q02260 146 aaPredicted RBP2.82□□□□□ -1.96
SSO2YMR183C PSF1Q12488 208 aa2.82□□□□□ -1.96
SSO2YMR183C WIP1Q2V2P8 89 aa2.82□□□□□ -1.96
SSO2YMR183C VMR1P38735 1592 aa2.82□□□□□ -1.96
SSO2YMR183C RPS19AP07280 144 aaKnown RBP2.81□□□□□ -1.96
SSO2YMR183C RPS19BP07281 144 aaPredicted RBP2.81□□□□□ -1.96
SSO2YMR183C SCL1P21243 252 aaKnown RBP2.81□□□□□ -1.96
SSO2YMR183C OPY1P38271 328 aa2.81□□□□□ -1.96
SSO2YMR183C ARC15P40518 154 aaRIP-Chip data2.81□□□□□ -1.96not detected
SSO2YMR183C OST2P46964 130 aa2.81□□□□□ -1.96
SSO2YMR183C TIM13P53299 105 aa2.81□□□□□ -1.96
SSO2YMR183C HHO1P53551 258 aa2.81□□□□□ -1.96
SSO2YMR183C APJ1P53940 528 aa2.81□□□□□ -1.96
SSO2YMR183C RSM10Q03201 203 aa2.81□□□□□ -1.96
SSO2YMR183C FRQ1Q06389 190 aa2.81□□□□□ -1.96
SSO2YMR183C IES3Q12345 250 aa2.81□□□□□ -1.96
SSO2YMR183C GEA1P47102 1408 aaPredicted RBP2.8□□□□□ -1.96
SSO2YMR183C ADH1P00330 348 aaKnown RBP2.8□□□□□ -1.96
SSO2YMR183C RPL9AP05738 191 aaKnown RBP2.8□□□□□ -1.96
SSO2YMR183C RAD10P06838 210 aa2.8□□□□□ -1.96
SSO2YMR183C ATP15P21306 62 aa2.8□□□□□ -1.96
SSO2YMR183C RPC19P28000 142 aaKnown RBP2.8□□□□□ -1.96
SSO2YMR183C TKL2P33315 681 aa2.8□□□□□ -1.96
SSO2YMR183C CPR5P35176 225 aa2.8□□□□□ -1.96
SSO2YMR183C YER134CP40081 178 aa2.8□□□□□ -1.96
SSO2YMR183C GLC8P41818 229 aa2.8□□□□□ -1.96
SSO2YMR183C YFR054CP43622 192 aa2.8□□□□□ -1.96
SSO2YMR183C SNX4P47057 423 aa2.8□□□□□ -1.96
SSO2YMR183C DSK2P48510 373 aa2.8□□□□□ -1.96
SSO2YMR183C RPL9BP51401 191 aaKnown RBP2.8□□□□□ -1.96
SSO2YMR183C CAB4P53332 305 aa2.8□□□□□ -1.96
SSO2YMR183C COF1Q03048 143 aaKnown RBP2.8□□□□□ -1.96
SSO2YMR183C TSA2Q04120 196 aa2.8□□□□□ -1.96
SSO2YMR183C SDH7Q04401 133 aa2.8□□□□□ -1.96
SSO2YMR183C AKR2Q12013 749 aa2.8□□□□□ -1.96
SSO2YMR183C ATP14Q12349 124 aa2.8□□□□□ -1.96
SSO2YMR183C YLR412C-AQ3E742 68 aa2.8□□□□□ -1.96
SSO2YMR183C BCK1Q01389 1478 aa2.79□□□□□ -1.96
SSO2YMR183C ATP5P09457 212 aa2.79□□□□□ -1.96
SSO2YMR183C HSP30P25619 332 aa2.79□□□□□ -1.96
SSO2YMR183C RPS1AP33442 255 aaKnown RBP2.79□□□□□ -1.96
SSO2YMR183C PAN3P36102 679 aaPredicted RBP2.79□□□□□ -1.96
SSO2YMR183C YER188WP40103 239 aa2.79□□□□□ -1.96
SSO2YMR183C YFL019CP43576 117 aa2.79□□□□□ -1.96
SSO2YMR183C YDR366CP87287 132 aa2.79□□□□□ -1.96
SSO2YMR183C TIM9O74700 87 aa2.78□□□□□ -1.96
SSO2YMR183C TIR1P10863 254 aa2.78□□□□□ -1.96
SSO2YMR183C SHE2P36068 246 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
SSO2YMR183C ECO1P43605 281 aa2.78□□□□□ -1.96
SSO2YMR183C FIP1P45976 327 aa2.78□□□□□ -1.96
SSO2YMR183C GON7P46984 123 aa2.78□□□□□ -1.96
SSO2YMR183C APS3P47064 194 aa2.78□□□□□ -1.96
SSO2YMR183C FCF1Q05498 189 aaPredicted RBP2.78□□□□□ -1.96
SSO2YMR183C PRP11Q07350 266 aaPredicted RBP2.78□□□□□ -1.96
SSO2YMR183C CCH1P50077 2039 aa2.77□□□□□ -1.97
SSO2YMR183C CPA1P07258 411 aaKnown RBP2.77□□□□□ -1.97
SSO2YMR183C YHR032W-AP0C5N6 59 aa2.77□□□□□ -1.97
SSO2YMR183C RPS20P38701 121 aaKnown RBP2.77□□□□□ -1.97
SSO2YMR183C VTC1P40046 129 aaRIP-Chip data2.77□□□□□ -1.97not detected
SSO2YMR183C GLR1P41921 483 aaKnown RBP2.77□□□□□ -1.97
SSO2YMR183C ERJ5P43613 295 aaPredicted RBP2.77□□□□□ -1.97
SSO2YMR183C AIF1P52923 378 aa2.77□□□□□ -1.97
SSO2YMR183C YGL193CP53097 103 aa2.77□□□□□ -1.97
SSO2YMR183C YGR039WP53225 103 aa2.77□□□□□ -1.97
SSO2YMR183C YGR219WP53307 113 aa2.77□□□□□ -1.97
SSO2YMR183C YDR274CP87283 123 aa2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms