RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C DGK1Q12382 290 aa-0.25□□□□□ -2.45
VPS20YMR077C ASF2P32448 525 aaPredicted RBP-0.26□□□□□ -2.45
VPS20YMR077C IKI1P38874 309 aa-0.26□□□□□ -2.45
VPS20YMR077C FCY1Q12178 158 aa-0.26□□□□□ -2.45
VPS20YMR077C NCB2Q92317 146 aa-0.26□□□□□ -2.45
VPS20YMR077C HFA1P32874 2273 aa-0.26□□□□□ -2.45
VPS20YMR077C MRS1P07266 363 aa-0.27□□□□□ -2.45
VPS20YMR077C COQ1P18900 473 aa-0.27□□□□□ -2.45
VPS20YMR077C SHB17P36136 271 aaKnown RBP-0.27□□□□□ -2.45
VPS20YMR077C YKR005CQ02203 525 aa-0.27□□□□□ -2.45
VPS20YMR077C DML1Q03652 475 aa-0.27□□□□□ -2.45
VPS20YMR077C YLR031WQ07978 186 aa-0.27□□□□□ -2.45
VPS20YMR077C ATG41Q12048 136 aa-0.27□□□□□ -2.45
VPS20YMR077C RFA3P26755 122 aaKnown RBP-0.28□□□□□ -2.45
VPS20YMR077C NTG1P31378 399 aa-0.28□□□□□ -2.45
VPS20YMR077C TDA4P47153 279 aa-0.28□□□□□ -2.45
VPS20YMR077C AVO2Q04749 426 aa-0.28□□□□□ -2.45
VPS20YMR077C RPL43AP0CX25 92 aaKnown RBP-0.29□□□□□ -2.46
VPS20YMR077C RPL43BP0CX26 92 aa-0.29□□□□□ -2.46
VPS20YMR077C PRE1P22141 198 aaKnown RBP-0.29□□□□□ -2.46
VPS20YMR077C CLG1P35190 452 aa-0.29□□□□□ -2.46
VPS20YMR077C FMP23P38231 175 aa-0.29□□□□□ -2.46
VPS20YMR077C CCS1P40202 249 aaKnown RBP-0.29□□□□□ -2.46
VPS20YMR077C POG1P40473 351 aa-0.29□□□□□ -2.46
VPS20YMR077C SBH1P52870 82 aa-0.29□□□□□ -2.46
VPS20YMR077C YGL230CP53074 147 aa-0.29□□□□□ -2.46
VPS20YMR077C DAS2Q12084 232 aa-0.29□□□□□ -2.46
VPS20YMR077C ATP20Q12233 115 aa-0.29□□□□□ -2.46
VPS20YMR077C YLR422WQ06409 1932 aa-0.3□□□□□ -2.46
VPS20YMR077C RRT1P38192 103 aa-0.3□□□□□ -2.46
VPS20YMR077C TMA22P47089 198 aaPredicted RBP-0.3□□□□□ -2.46
VPS20YMR077C YNL184CP53876 108 aa-0.3□□□□□ -2.46
VPS20YMR077C YMR315WQ04869 349 aaKnown RBP-0.3□□□□□ -2.46
VPS20YMR077C MAK31P23059 88 aa-0.31□□□□□ -2.46
VPS20YMR077C NSA2P40078 261 aaKnown RBP-0.31□□□□□ -2.46
VPS20YMR077C CIN5P40917 295 aa-0.31□□□□□ -2.46
VPS20YMR077C MSS2P40990 351 aa-0.31□□□□□ -2.46
VPS20YMR077C YLR307C-AQ3E825 87 aa-0.31□□□□□ -2.46
VPS20YMR077C IGO2Q9P305 131 aa-0.31□□□□□ -2.46
VPS20YMR077C HTB1P02293 131 aaKnown RBP-0.32□□□□□ -2.46
VPS20YMR077C HTB2P02294 131 aa-0.32□□□□□ -2.46
VPS20YMR077C KIN28P06242 306 aa-0.32□□□□□ -2.46
VPS20YMR077C RPS24AP0CX31 135 aaKnown RBP-0.32□□□□□ -2.46
VPS20YMR077C RPS24BP0CX32 135 aaKnown RBP-0.32□□□□□ -2.46
VPS20YMR077C PTC1P35182 281 aa-0.32□□□□□ -2.46
VPS20YMR077C NSG1P38837 291 aa-0.32□□□□□ -2.46
VPS20YMR077C MMS2P53152 137 aa-0.32□□□□□ -2.46
VPS20YMR077C NRK1P53915 240 aa-0.32□□□□□ -2.46
VPS20YMR077C ROM2P51862 1356 aaKnown RBP-0.32□□□□□ -2.46
VPS20YMR077C YMR141CP40211 102 aa-0.33□□□□□ -2.46
VPS20YMR077C YOR342CQ12182 319 aa-0.33□□□□□ -2.46
VPS20YMR077C RUD3Q12234 484 aaKnown RBP-0.33□□□□□ -2.46
VPS20YMR077C ARG80P07249 177 aa-0.34□□□□□ -2.46
VPS20YMR077C YLR157W-EP0CF00 54 aa-0.34□□□□□ -2.46
VPS20YMR077C YNL122CP53921 115 aaPredicted RBP-0.34□□□□□ -2.46
VPS20YMR077C RIM9Q04734 239 aa-0.34□□□□□ -2.46
VPS20YMR077C GAL83Q04739 417 aa-0.34□□□□□ -2.46
VPS20YMR077C TAF2P23255 1407 aa-0.35□□□□□ -2.47
VPS20YMR077C GRX5Q02784 150 aa-0.35□□□□□ -2.47
VPS20YMR077C MGR2Q02889 113 aa-0.35□□□□□ -2.47
VPS20YMR077C VAM10Q08474 114 aa-0.35□□□□□ -2.47
VPS20YMR077C YLR412C-AQ3E742 68 aa-0.35□□□□□ -2.47
VPS20YMR077C YOR381W-AQ3E804 55 aa-0.35□□□□□ -2.47
VPS20YMR077C GCY1P14065 312 aaKnown RBP RIP-Chip data-0.36□□□□□ -2.47not detected
VPS20YMR077C MOB1P40484 314 aa-0.36□□□□□ -2.47
VPS20YMR077C YOR072WQ08486 104 aa-0.36□□□□□ -2.47
VPS20YMR077C GIS3Q12418 502 aa-0.36□□□□□ -2.47
VPS20YMR077C YPR014CQ6B0W2 109 aa-0.36□□□□□ -2.47
VPS20YMR077C RPS22AP0C0W1 130 aaKnown RBP-0.37□□□□□ -2.47
VPS20YMR077C HSP30P25619 332 aa-0.37□□□□□ -2.47
VPS20YMR077C YRA2P36036 203 aaKnown RBP RIP-Chip data-0.37□□□□□ -2.47not detected
VPS20YMR077C ARO80Q04052 950 aa-0.37□□□□□ -2.47
VPS20YMR077C HRD1Q08109 551 aa-0.37□□□□□ -2.47
VPS20YMR077C YDL157CQ12082 118 aa-0.37□□□□□ -2.47
VPS20YMR077C RPS22BQ3E7Y3 130 aaKnown RBP-0.37□□□□□ -2.47
VPS20YMR077C CBF1P17106 351 aa-0.38□□□□□ -2.47
VPS20YMR077C ADE1P27616 306 aa-0.38□□□□□ -2.47
VPS20YMR077C APS3P47064 194 aa-0.38□□□□□ -2.47
VPS20YMR077C VPS28Q02767 242 aa-0.38□□□□□ -2.47
VPS20YMR077C YCL012CQ8J0M4 134 aa-0.38□□□□□ -2.47
VPS20YMR077C HAP2P06774 265 aa-0.39□□□□□ -2.47
VPS20YMR077C UBC6P33296 250 aaPredicted RBP-0.39□□□□□ -2.47
VPS20YMR077C FYV4P38783 130 aaPredicted RBP-0.39□□□□□ -2.47
VPS20YMR077C YGR269WP40326 108 aa-0.39□□□□□ -2.47
VPS20YMR077C PGA1P53896 198 aa-0.39□□□□□ -2.47
VPS20YMR077C YOL024WQ08172 172 aa-0.39□□□□□ -2.47
VPS20YMR077C CPR5P35176 225 aa-0.4□□□□□ -2.47
VPS20YMR077C YBR027CP38220 110 aa-0.4□□□□□ -2.47
VPS20YMR077C CCC1P47818 322 aa-0.4□□□□□ -2.47
VPS20YMR077C GEP7P53171 287 aa-0.4□□□□□ -2.47
VPS20YMR077C RTC4P53850 401 aa-0.4□□□□□ -2.47
VPS20YMR077C PGA2P53903 129 aa-0.4□□□□□ -2.47
VPS20YMR077C YML079WQ03629 201 aa-0.4□□□□□ -2.47
VPS20YMR077C TAO3P40468 2376 aa-0.4□□□□□ -2.47
VPS20YMR077C AIM34Q03673 198 aa-0.41□□□□□ -2.48
VPS20YMR077C SEN15Q04675 128 aa-0.41□□□□□ -2.48
VPS20YMR077C MATALPHA2P0CY08 210 aa-0.42□□□□□ -2.48
VPS20YMR077C HMLALPHA2P0CY09 210 aa-0.42□□□□□ -2.48
VPS20YMR077C SEC14P24280 304 aaKnown RBP-0.42□□□□□ -2.48
VPS20YMR077C RFC2P40348 353 aa-0.42□□□□□ -2.48
Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms