RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C TIM13P53299 105 aa2.05□□□□□ -2.08
SUB1YMR039C YNR062CP53748 327 aa2.05□□□□□ -2.08
SUB1YMR039C LSM3P57743 89 aaKnown RBP2.05□□□□□ -2.08
SUB1YMR039C DYN2Q02647 92 aa2.05□□□□□ -2.08
SUB1YMR039C YMR295CQ03559 197 aa2.05□□□□□ -2.08
SUB1YMR039C PKR1Q03880 122 aaKnown RBP2.05□□□□□ -2.08
SUB1YMR039C YOR289WQ12012 251 aaPredicted RBP2.05□□□□□ -2.08
SUB1YMR039C DAS2Q12084 232 aa2.05□□□□□ -2.08
SUB1YMR039C RIB3Q99258 208 aa2.05□□□□□ -2.08
SUB1YMR039C ATG40Q99325 256 aa2.05□□□□□ -2.08
SUB1YMR039C POR1P04840 283 aaKnown RBP2.04□□□□□ -2.08
SUB1YMR039C UBI4P0CG63 381 aaKnown RBP2.04□□□□□ -2.08
SUB1YMR039C YOR062CP36025 268 aa2.04□□□□□ -2.08
SUB1YMR039C PRS3P38689 320 aaKnown RBP2.04□□□□□ -2.08
SUB1YMR039C IPI1P38803 334 aaPredicted RBP2.04□□□□□ -2.08
SUB1YMR039C ALB1P47019 175 aaPredicted RBP2.04□□□□□ -2.08
SUB1YMR039C EAF6P47128 113 aa2.04□□□□□ -2.08
SUB1YMR039C BOL2P53082 120 aa2.04□□□□□ -2.08
SUB1YMR039C Q0144Q9ZZW2 109 aa2.04□□□□□ -2.08
SUB1YMR039C RAS2P01120 322 aaKnown RBP2.03□□□□□ -2.08
SUB1YMR039C RPS1AP33442 255 aaKnown RBP2.03□□□□□ -2.08
SUB1YMR039C CPR5P35176 225 aa2.03□□□□□ -2.08
SUB1YMR039C NSA2P40078 261 aaKnown RBP2.03□□□□□ -2.08
SUB1YMR039C YNL217WP40152 326 aa2.03□□□□□ -2.08
SUB1YMR039C DLS1P40366 167 aa2.03□□□□□ -2.08
SUB1YMR039C APQ12P40532 138 aa2.03□□□□□ -2.08
SUB1YMR039C CUP9P41817 306 aa2.03□□□□□ -2.08
SUB1YMR039C GLR1P41921 483 aaKnown RBP2.03□□□□□ -2.08
SUB1YMR039C ERJ5P43613 295 aaPredicted RBP2.03□□□□□ -2.08
SUB1YMR039C CCC1P47818 322 aa2.03□□□□□ -2.08
SUB1YMR039C YMR099CQ03161 297 aaKnown RBP2.03□□□□□ -2.08
SUB1YMR039C RAV2Q03956 351 aa2.03□□□□□ -2.08
SUB1YMR039C THI74Q04083 370 aa2.03□□□□□ -2.08
SUB1YMR039C RDS3Q06835 107 aaPredicted RBP2.03□□□□□ -2.08
SUB1YMR039C YPR202WQ08993 238 aa2.03□□□□□ -2.08
SUB1YMR039C YOR214CQ12282 236 aa2.03□□□□□ -2.08
SUB1YMR039C WIP1Q2V2P8 89 aa2.03□□□□□ -2.08
SUB1YMR039C SCL1P21243 252 aaKnown RBP2.02□□□□□ -2.09
SUB1YMR039C PEX34P25584 144 aa2.02□□□□□ -2.09
SUB1YMR039C YBR209WP38311 105 aa2.02□□□□□ -2.09
SUB1YMR039C SOL1P50278 321 aa2.02□□□□□ -2.09
SUB1YMR039C ERG25P53045 309 aa2.02□□□□□ -2.09
SUB1YMR039C YNR077CP53758 84 aa2.02□□□□□ -2.09
SUB1YMR039C TIM8P57744 87 aa2.02□□□□□ -2.09
SUB1YMR039C HHT1P61830 136 aa2.02□□□□□ -2.09
SUB1YMR039C GRX5Q02784 150 aa2.02□□□□□ -2.09
SUB1YMR039C SHH3Q04487 196 aa2.02□□□□□ -2.09
SUB1YMR039C SSN2P38931 1420 aa2.01□□□□□ -2.09
SUB1YMR039C RPL2AP0CX45 254 aaKnown RBP2.01□□□□□ -2.09
SUB1YMR039C RPL2BP0CX46 254 aaKnown RBP2.01□□□□□ -2.09
SUB1YMR039C TIR1P10863 254 aa2.01□□□□□ -2.09
SUB1YMR039C NSP1P14907 823 aaKnown RBP2.01□□□□□ -2.09
SUB1YMR039C PHO85P17157 305 aa2.01□□□□□ -2.09
SUB1YMR039C STP22P25604 385 aa2.01□□□□□ -2.09
SUB1YMR039C YCR101CP25607 182 aa2.01□□□□□ -2.09
SUB1YMR039C SUA7P29055 345 aaPredicted RBP2.01□□□□□ -2.09
SUB1YMR039C YNL200CP40165 246 aaKnown RBP2.01□□□□□ -2.09
SUB1YMR039C HPM1P40481 377 aa2.01□□□□□ -2.09
SUB1YMR039C GLC8P41818 229 aa2.01□□□□□ -2.09
SUB1YMR039C YJR015WP47090 510 aa2.01□□□□□ -2.09
SUB1YMR039C MPC3P53311 146 aa2.01□□□□□ -2.09
SUB1YMR039C UBC7Q02159 165 aa2.01□□□□□ -2.09
SUB1YMR039C VPS28Q02767 242 aa2.01□□□□□ -2.09
SUB1YMR039C CSN9Q03981 162 aa2.01□□□□□ -2.09
SUB1YMR039C RPL30P14120 105 aaKnown RBP2□□□□□ -2.09
SUB1YMR039C TFC1P32367 649 aa2□□□□□ -2.09
SUB1YMR039C FZF1P32805 299 aa2□□□□□ -2.09
SUB1YMR039C GSP1P32835 219 aaKnown RBP2□□□□□ -2.09
SUB1YMR039C GSP2P32836 220 aaKnown RBP2□□□□□ -2.09
SUB1YMR039C SPC25P40014 221 aa2□□□□□ -2.09
SUB1YMR039C RBL2P48606 106 aaKnown RBP2□□□□□ -2.09
SUB1YMR039C YKR005CQ02203 525 aa2□□□□□ -2.09
SUB1YMR039C CGI121Q03705 181 aaKnown RBP2□□□□□ -2.09
SUB1YMR039C FMN1Q03778 218 aa2□□□□□ -2.09
SUB1YMR039C CUE4Q04201 117 aaPredicted RBP2□□□□□ -2.09
SUB1YMR039C FRQ1Q06389 190 aa2□□□□□ -2.09
SUB1YMR039C BUD4P47136 1447 aa2□□□□□ -2.09
SUB1YMR039C FKS1P38631 1876 aaKnown RBP1.99□□□□□ -2.09
SUB1YMR039C YLR236CA0A023PZG4 107 aa1.99□□□□□ -2.09
SUB1YMR039C KIN28P06242 306 aa1.99□□□□□ -2.09
SUB1YMR039C ATP5P09457 212 aa1.99□□□□□ -2.09
SUB1YMR039C CSH1P38287 376 aa1.99□□□□□ -2.09
SUB1YMR039C YHR022CP38763 256 aa1.99□□□□□ -2.09
SUB1YMR039C FYV4P38783 130 aaPredicted RBP1.99□□□□□ -2.09
SUB1YMR039C YFR054CP43622 192 aa1.99□□□□□ -2.09
SUB1YMR039C ORM1P53224 222 aa1.99□□□□□ -2.09
SUB1YMR039C RUB1Q03919 77 aa1.99□□□□□ -2.09
SUB1YMR039C GAL83Q04739 417 aa1.99□□□□□ -2.09
SUB1YMR039C YMR253CQ04835 414 aa1.99□□□□□ -2.09
SUB1YMR039C YMR320WQ04897 101 aa1.99□□□□□ -2.09
SUB1YMR039C ATP20Q12233 115 aa1.99□□□□□ -2.09
SUB1YMR039C PST2Q12335 198 aaKnown RBP1.99□□□□□ -2.09
SUB1YMR039C MET5P47169 1442 aa1.99□□□□□ -2.09
SUB1YMR039C RAD6P06104 172 aa1.98□□□□□ -2.09
SUB1YMR039C DDI2P0CH63 225 aa1.98□□□□□ -2.09
SUB1YMR039C DDI3P0CH64 225 aa1.98□□□□□ -2.09
SUB1YMR039C RPC19P28000 142 aaKnown RBP1.98□□□□□ -2.09
SUB1YMR039C UGX2P32772 223 aa1.98□□□□□ -2.09
SUB1YMR039C TRS20P38334 175 aa1.98□□□□□ -2.09
SUB1YMR039C SAY1P53324 424 aa1.98□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 112.6 ms