RNA–Protein interactions for RNA: YMR012W

CLU1, Transcript of Subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene CLU1, Length 3,834 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLU1	YMR012W	AIM36	Q03798	255 aa		0.83	□□□□□ -2.28
CLU1	YMR012W	LDB18	Q07887	179 aa		0.83	□□□□□ -2.28
CLU1	YMR012W	DDI2	P0CH63	225 aa		0.83	□□□□□ -2.28
CLU1	YMR012W	DDI3	P0CH64	225 aa		0.83	□□□□□ -2.28
CLU1	YMR012W	MRPS28	P21771	286 aa		0.83	□□□□□ -2.28
CLU1	YMR012W	UPS2	P35200	230 aa		0.83	□□□□□ -2.28
CLU1	YMR012W	MBA1	P38300	278 aa		0.83	□□□□□ -2.28
CLU1	YMR012W	MRH4	P53166	561 aa		0.83	□□□□□ -2.28
CLU1	YMR012W	RCE1	Q03530	315 aa		0.83	□□□□□ -2.28
CLU1	YMR012W	ARO80	Q04052	950 aa		0.83	□□□□□ -2.28
CLU1	YMR012W	PRR2	Q12310	699 aa		0.83	□□□□□ -2.28
CLU1	YMR012W	YLR156W	P0CE96	114 aa		0.82	□□□□□ -2.28
CLU1	YMR012W	YLR159W	P0CE97	114 aa		0.82	□□□□□ -2.28
CLU1	YMR012W	YLR161W	P0CE98	114 aa		0.82	□□□□□ -2.28
CLU1	YMR012W	COX10	P21592	462 aa		0.82	□□□□□ -2.28
CLU1	YMR012W	RNP1	P32385	249 aa		0.82	□□□□□ -2.28
CLU1	YMR012W	PAM17	P36147	197 aa		0.82	□□□□□ -2.28
CLU1	YMR012W	SHE1	P38200	338 aa		0.82	□□□□□ -2.28
CLU1	YMR012W	YNL200C	P40165	246 aa	Known RBP	0.82	□□□□□ -2.28
CLU1	YMR012W	PCI8	P40512	444 aa		0.82	□□□□□ -2.28
CLU1	YMR012W	YAR1	P46683	200 aa		0.82	□□□□□ -2.28
CLU1	YMR012W	YNR077C	P53758	84 aa		0.82	□□□□□ -2.28
CLU1	YMR012W	YMR253C	Q04835	414 aa		0.82	□□□□□ -2.28
CLU1	YMR012W	FCY1	Q12178	158 aa		0.82	□□□□□ -2.28
CLU1	YMR012W	HAP3	P13434	144 aa		0.82	□□□□□ -2.28
CLU1	YMR012W	AUA1	P32450	94 aa		0.82	□□□□□ -2.28
CLU1	YMR012W	MTW1	P39731	289 aa		0.82	□□□□□ -2.28
CLU1	YMR012W	CDC40	P40968	455 aa	Predicted RBP	0.82	□□□□□ -2.28
CLU1	YMR012W	COG5	P53951	403 aa		0.82	□□□□□ -2.28
CLU1	YMR012W	MAK3	Q03503	176 aa		0.82	□□□□□ -2.28
CLU1	YMR012W	NIP7	Q08962	181 aa	Known RBP	0.82	□□□□□ -2.28
CLU1	YMR012W	BOL1	Q3E793	110 aa		0.82	□□□□□ -2.28
CLU1	YMR012W	CMC4	Q3E7A9	73 aa		0.82	□□□□□ -2.28
CLU1	YMR012W	YBL112C	Q3E7Y4	105 aa		0.82	□□□□□ -2.28
CLU1	YMR012W	TOM40	P23644	387 aa	Known RBP	0.82	□□□□□ -2.28
CLU1	YMR012W	LDS1	P31379	325 aa		0.82	□□□□□ -2.28
CLU1	YMR012W	ALK2	P32789	676 aa	Predicted RBP	0.82	□□□□□ -2.28
CLU1	YMR012W	APS1	P35181	156 aa		0.82	□□□□□ -2.28
CLU1	YMR012W	MRPL28	P36527	147 aa		0.82	□□□□□ -2.28
CLU1	YMR012W	YEL067C	P39978	195 aa		0.82	□□□□□ -2.28
CLU1	YMR012W	HNT1	Q04344	158 aa	Known RBP	0.82	□□□□□ -2.28
CLU1	YMR012W	UIP4	Q08926	304 aa		0.82	□□□□□ -2.28
CLU1	YMR012W	ZIP1	P31111	875 aa		0.81	□□□□□ -2.28
CLU1	YMR012W	SKG1	P36169	355 aa		0.81	□□□□□ -2.28
CLU1	YMR012W	LPP1	Q04396	274 aa		0.81	□□□□□ -2.28
CLU1	YMR012W	DYN3	Q04949	312 aa		0.81	□□□□□ -2.28
CLU1	YMR012W	ATX2	Q12067	313 aa		0.81	□□□□□ -2.28
CLU1	YMR012W	YLR412C-A	Q3E742	68 aa		0.81	□□□□□ -2.28
CLU1	YMR012W	SLO1	Q3E784	85 aa		0.81	□□□□□ -2.28
CLU1	YMR012W	RAS2	P01120	322 aa	Known RBP	0.81	□□□□□ -2.28
CLU1	YMR012W	Q0255	P03881	472 aa		0.81	□□□□□ -2.28
CLU1	YMR012W	SEN2	P16658	377 aa		0.81	□□□□□ -2.28
CLU1	YMR012W	UTP30	P36144	274 aa	Known RBP	0.81	□□□□□ -2.28
CLU1	YMR012W	ERG25	P53045	309 aa		0.81	□□□□□ -2.28
CLU1	YMR012W	ORM1	P53224	222 aa		0.81	□□□□□ -2.28
CLU1	YMR012W	YNL184C	P53876	108 aa		0.81	□□□□□ -2.28
CLU1	YMR012W	FOL3	Q12676	427 aa	Predicted RBP	0.81	□□□□□ -2.28
CLU1	YMR012W	DFM1	Q12743	341 aa	Known RBP	0.81	□□□□□ -2.28
CLU1	YMR012W	NHP6A	P11632	93 aa	Known RBP	0.81	□□□□□ -2.28
CLU1	YMR012W	RPL30	P14120	105 aa	Known RBP	0.81	□□□□□ -2.28
CLU1	YMR012W	HYM1	P32464	399 aa		0.81	□□□□□ -2.28
CLU1	YMR012W	SHG1	P38337	142 aa		0.81	□□□□□ -2.28
CLU1	YMR012W	YNL140C	P53910	189 aa		0.81	□□□□□ -2.28
CLU1	YMR012W	YOR186W	Q08560	144 aa		0.81	□□□□□ -2.28
CLU1	YMR012W	TIM22	Q12328	207 aa		0.81	□□□□□ -2.28
CLU1	YMR012W	YEL009C-A	A0A023PZF2	135 aa		0.8	□□□□□ -2.28
CLU1	YMR012W	PRE7	P23724	241 aa	Known RBP	0.8	□□□□□ -2.28
CLU1	YMR012W	AEP1	P32493	518 aa		0.8	□□□□□ -2.28
CLU1	YMR012W	SUI1	P32911	108 aa	Known RBP	0.8	□□□□□ -2.28
CLU1	YMR012W	MPC2	P38857	129 aa		0.8	□□□□□ -2.28
CLU1	YMR012W	PEX17	P40155	199 aa		0.8	□□□□□ -2.28
CLU1	YMR012W	GLC8	P41818	229 aa		0.8	□□□□□ -2.28
CLU1	YMR012W	RPA43	P46669	326 aa		0.8	□□□□□ -2.28
CLU1	YMR012W	ALB1	P47019	175 aa	Predicted RBP	0.8	□□□□□ -2.28
CLU1	YMR012W	OST3	P48439	350 aa		0.8	□□□□□ -2.28
CLU1	YMR012W	HHT1	P61830	136 aa		0.8	□□□□□ -2.28
CLU1	YMR012W	HSK3	P69852	69 aa		0.8	□□□□□ -2.28
CLU1	YMR012W	MRX8	Q05473	314 aa		0.8	□□□□□ -2.28
CLU1	YMR012W	RAF1	Q06891	181 aa		0.8	□□□□□ -2.28
CLU1	YMR012W	PRM3	Q08931	133 aa		0.8	□□□□□ -2.28
CLU1	YMR012W	YIR021W-A	Q3E739	70 aa		0.8	□□□□□ -2.28
CLU1	YMR012W	YER078W-A	Q3E7A2	54 aa		0.8	□□□□□ -2.28
CLU1	YMR012W	HTL1	Q9URQ5	78 aa		0.8	□□□□□ -2.28
CLU1	YMR012W	NOP1	P15646	327 aa	Known RBP	0.8	□□□□□ -2.28
CLU1	YMR012W	RPS1A	P33442	255 aa	Known RBP	0.8	□□□□□ -2.28
CLU1	YMR012W	TIP20	P33891	701 aa		0.8	□□□□□ -2.28
CLU1	YMR012W	YGR015C	P53208	328 aa		0.8	□□□□□ -2.28
CLU1	YMR012W	YNG1	Q08465	219 aa		0.8	□□□□□ -2.28
CLU1	YMR012W	TRM10	Q12400	293 aa		0.8	□□□□□ -2.28
CLU1	YMR012W	YAL064W-B	O13512	126 aa		0.8	□□□□□ -2.28
CLU1	YMR012W	IDP1	P21954	428 aa	Known RBP	0.8	□□□□□ -2.28
CLU1	YMR012W	UTP11	P34247	250 aa	Predicted RBP	0.8	□□□□□ -2.28
CLU1	YMR012W	YOR062C	P36025	268 aa		0.8	□□□□□ -2.28
CLU1	YMR012W	YBR063C	P38083	404 aa		0.8	□□□□□ -2.28
CLU1	YMR012W	GPI14	P47088	403 aa	Known RBP	0.8	□□□□□ -2.28
CLU1	YMR012W	BUD25	P85052	153 aa		0.8	□□□□□ -2.28
CLU1	YMR012W	GAL83	Q04739	417 aa		0.8	□□□□□ -2.28
CLU1	YMR012W	CSI2	Q08054	341 aa		0.8	□□□□□ -2.28
CLU1	YMR012W	FDH1	Q08911	376 aa		0.8	□□□□□ -2.28
CLU1	YMR012W	YDL180W	Q12301	547 aa		0.8	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 32 ms