RNA–Protein interactions for RNA: YLR412W

BER1, Transcript of Protein involved in microtubule-related processes, yeast

Gene BER1, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BER1	YLR412W	FMP23	P38231	175 aa		0.37	□□□□□ -2.35
BER1	YLR412W	DCV1	P43595	202 aa		0.37	□□□□□ -2.35
BER1	YLR412W	YOR015W	Q12169	119 aa		0.37	□□□□□ -2.35
BER1	YLR412W	MATALPHA2	P0CY08	210 aa		0.36	□□□□□ -2.35
BER1	YLR412W	HMLALPHA2	P0CY09	210 aa		0.36	□□□□□ -2.35
BER1	YLR412W	ELP6	Q04868	273 aa		0.36	□□□□□ -2.35
BER1	YLR412W	UPS1	Q05776	175 aa		0.36	□□□□□ -2.35
BER1	YLR412W	DAS2	Q12084	232 aa		0.36	□□□□□ -2.35
BER1	YLR412W	RPS24A	P0CX31	135 aa	Known RBP	0.35	□□□□□ -2.35
BER1	YLR412W	RPS24B	P0CX32	135 aa	Known RBP	0.35	□□□□□ -2.35
BER1	YLR412W	NTG1	P31378	399 aa		0.35	□□□□□ -2.35
BER1	YLR412W	NSA2	P40078	261 aa	Known RBP	0.35	□□□□□ -2.35
BER1	YLR412W	NSE4	P43124	402 aa		0.35	□□□□□ -2.35
BER1	YLR412W	TMA22	P47089	198 aa	Predicted RBP	0.35	□□□□□ -2.35
BER1	YLR412W	SBH1	P52870	82 aa		0.35	□□□□□ -2.35
BER1	YLR412W	ARO80	Q04052	950 aa		0.35	□□□□□ -2.35
BER1	YLR412W	YHP1	Q04116	353 aa		0.35	□□□□□ -2.35
BER1	YLR412W	ATP20	Q12233	115 aa		0.35	□□□□□ -2.35
BER1	YLR412W	MRPS17	Q03246	237 aa	Predicted RBP	0.34	□□□□□ -2.36
BER1	YLR412W	RNH1	Q04740	348 aa		0.34	□□□□□ -2.36
BER1	YLR412W	DGK1	Q12382	290 aa		0.34	□□□□□ -2.36
BER1	YLR412W	QCR7	P00128	127 aa		0.33	□□□□□ -2.36
BER1	YLR412W	RRT1	P38192	103 aa		0.33	□□□□□ -2.36
BER1	YLR412W	YOR342C	Q12182	319 aa		0.33	□□□□□ -2.36
BER1	YLR412W	YMR030W-A	Q3E760	96 aa		0.33	□□□□□ -2.36
BER1	YLR412W	NSG1	P38837	291 aa		0.32	□□□□□ -2.36
BER1	YLR412W	YJR015W	P47090	510 aa		0.32	□□□□□ -2.36
BER1	YLR412W	DML1	Q03652	475 aa		0.32	□□□□□ -2.36
BER1	YLR412W	ATG41	Q12048	136 aa		0.32	□□□□□ -2.36
BER1	YLR412W	YLR412C-A	Q3E742	68 aa		0.32	□□□□□ -2.36
BER1	YLR412W	DUR1,2	P32528	1835 aa	Known RBP	0.31	□□□□□ -2.36
BER1	YLR412W	PGA1	P53896	198 aa		0.31	□□□□□ -2.36
BER1	YLR412W	NRK1	P53915	240 aa		0.31	□□□□□ -2.36
BER1	YLR412W	YOL024W	Q08172	172 aa		0.31	□□□□□ -2.36
BER1	YLR412W	MAK31	P23059	88 aa		0.3	□□□□□ -2.36
BER1	YLR412W	ADE1	P27616	306 aa		0.3	□□□□□ -2.36
BER1	YLR412W	CCS1	P40202	249 aa	Known RBP	0.3	□□□□□ -2.36
BER1	YLR412W	SED1	Q01589	338 aa		0.3	□□□□□ -2.36
BER1	YLR412W	GAL83	Q04739	417 aa		0.3	□□□□□ -2.36
BER1	YLR412W	YPR014C	Q6B0W2	109 aa		0.3	□□□□□ -2.36
BER1	YLR412W	YLR422W	Q06409	1932 aa		0.3	□□□□□ -2.36
BER1	YLR412W	HFA1	P32874	2273 aa		0.29	□□□□□ -2.36
BER1	YLR412W	RPB4	P20433	221 aa	Predicted RBP	0.29	□□□□□ -2.36
BER1	YLR412W	YKR070W	P36151	352 aa	Known RBP	0.29	□□□□□ -2.36
BER1	YLR412W	RTC4	P53850	401 aa		0.29	□□□□□ -2.36
BER1	YLR412W	HHT1	P61830	136 aa		0.29	□□□□□ -2.36
BER1	YLR412W	TAH1	P25638	111 aa	Predicted RBP	0.28	□□□□□ -2.36
BER1	YLR412W	SHB17	P36136	271 aa	Known RBP	0.28	□□□□□ -2.36
BER1	YLR412W	GRX5	Q02784	150 aa		0.28	□□□□□ -2.36
BER1	YLR412W	YDC1	Q02896	317 aa		0.28	□□□□□ -2.36
BER1	YLR412W	TMA23	Q03525	211 aa		0.28	□□□□□ -2.36
BER1	YLR412W	AIM34	Q03673	198 aa		0.28	□□□□□ -2.36
BER1	YLR412W	RIM9	Q04734	239 aa		0.28	□□□□□ -2.36
BER1	YLR412W	YCR001W	P25347	104 aa		0.27	□□□□□ -2.37
BER1	YLR412W	TRX3	P25372	127 aa		0.27	□□□□□ -2.37
BER1	YLR412W	AVO2	Q04749	426 aa		0.27	□□□□□ -2.37
BER1	YLR412W	KEI1	Q06346	221 aa		0.27	□□□□□ -2.37
BER1	YLR412W	YOL013W-A	P0C272	63 aa	Predicted RBP	0.26	□□□□□ -2.37
BER1	YLR412W	CPR5	P35176	225 aa		0.26	□□□□□ -2.37
BER1	YLR412W	TIM11	P81449	96 aa	Predicted RBP	0.26	□□□□□ -2.37
BER1	YLR412W	NOC4	Q06512	552 aa	Predicted RBP	0.26	□□□□□ -2.37
BER1	YLR412W	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.26	□□□□□ -2.37
BER1	YLR412W	YOR381W-A	Q3E804	55 aa		0.26	□□□□□ -2.37
BER1	YLR412W	HSP30	P25619	332 aa		0.25	□□□□□ -2.37
BER1	YLR412W	YKT6	P36015	200 aa	Known RBP	0.25	□□□□□ -2.37
BER1	YLR412W	MPD1	Q12404	318 aa	Known RBP	0.25	□□□□□ -2.37
BER1	YLR412W	PRE1	P22141	198 aa	Known RBP	0.24	□□□□□ -2.37
BER1	YLR412W	YGL230C	P53074	147 aa		0.24	□□□□□ -2.37
BER1	YLR412W	VPS28	Q02767	242 aa		0.24	□□□□□ -2.37
BER1	YLR412W	FCY1	Q12178	158 aa		0.24	□□□□□ -2.37
BER1	YLR412W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.23	□□□□□ -2.37	not detected
BER1	YLR412W	AHC2	P25649	128 aa		0.23	□□□□□ -2.37
BER1	YLR412W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.23	□□□□□ -2.37	not detected
BER1	YLR412W	FYV4	P38783	130 aa	Predicted RBP	0.23	□□□□□ -2.37
BER1	YLR412W	POG1	P40473	351 aa		0.23	□□□□□ -2.37
BER1	YLR412W	CLG1	P35190	452 aa		0.22	□□□□□ -2.37
BER1	YLR412W	HHY1	P39982	102 aa		0.22	□□□□□ -2.37
BER1	YLR412W	GRX8	Q05926	109 aa		0.22	□□□□□ -2.37
BER1	YLR412W	YHR213W-B	Q8TGK1	99 aa		0.22	□□□□□ -2.37
BER1	YLR412W	RAD9	P14737	1309 aa		0.21	□□□□□ -2.38
BER1	YLR412W	YKL102C	P34249	101 aa		0.21	□□□□□ -2.38
BER1	YLR412W	CAF4	P36130	643 aa		0.21	□□□□□ -2.38
BER1	YLR412W	YNL200C	P40165	246 aa	Known RBP	0.21	□□□□□ -2.38
BER1	YLR412W	MOB1	P40484	314 aa		0.21	□□□□□ -2.38
BER1	YLR412W	YKR005C	Q02203	525 aa		0.21	□□□□□ -2.38
BER1	YLR412W	SHH4	Q06236	168 aa		0.21	□□□□□ -2.38
BER1	YLR412W	BRX1	Q08235	291 aa	Known RBP	0.21	□□□□□ -2.38
BER1	YLR412W	SEC14	P24280	304 aa	Known RBP	0.2	□□□□□ -2.38
BER1	YLR412W	RFC2	P40348	353 aa		0.2	□□□□□ -2.38
BER1	YLR412W	FMP32	P43557	207 aa		0.2	□□□□□ -2.38
BER1	YLR412W	YOR214C	Q12282	236 aa		0.2	□□□□□ -2.38
BER1	YLR412W	CIN5	P40917	295 aa		0.19	□□□□□ -2.38
BER1	YLR412W	CGR1	P53188	120 aa		0.19	□□□□□ -2.38
BER1	YLR412W	GPI17	Q04080	534 aa		0.19	□□□□□ -2.38
BER1	YLR412W	YDL157C	Q12082	118 aa		0.19	□□□□□ -2.38
BER1	YLR412W	JIP3	O13555	125 aa		0.18	□□□□□ -2.38
BER1	YLR412W	KIN28	P06242	306 aa		0.18	□□□□□ -2.38
BER1	YLR412W	YPR127W	Q06494	345 aa		0.18	□□□□□ -2.38
BER1	YLR412W	PRM3	Q08931	133 aa		0.18	□□□□□ -2.38
BER1	YLR412W	RAD6	P06104	172 aa		0.17	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms