RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W YPR127WQ06494 345 aa1.56□□□□□ -2.16
VPS38YLR360W CSM4Q08955 156 aa1.56□□□□□ -2.16
VPS38YLR360W YOL162WP0CF19 215 aa1.55□□□□□ -2.16
VPS38YLR360W MRPL44P19956 98 aa1.55□□□□□ -2.16
VPS38YLR360W MDH2P22133 377 aa1.55□□□□□ -2.16
VPS38YLR360W PRE1P22141 198 aaKnown RBP1.55□□□□□ -2.16
VPS38YLR360W RPS1AP33442 255 aaKnown RBP1.55□□□□□ -2.16
VPS38YLR360W SRP102P36057 244 aaPredicted RBP1.55□□□□□ -2.16
VPS38YLR360W YCR087C-AP37263 153 aa1.55□□□□□ -2.16
VPS38YLR360W FIG1P38224 298 aa1.55□□□□□ -2.16
VPS38YLR360W POP4P38336 279 aa1.55□□□□□ -2.16
VPS38YLR360W SHG1P38337 142 aa1.55□□□□□ -2.16
VPS38YLR360W DSE2P38844 325 aa1.55□□□□□ -2.16
VPS38YLR360W EGD2P38879 174 aaKnown RBP1.55□□□□□ -2.16
VPS38YLR360W YAR068WP39564 161 aa1.55□□□□□ -2.16
VPS38YLR360W YKE4P40544 346 aa1.55□□□□□ -2.16
VPS38YLR360W ARO8P53090 500 aaKnown RBP1.55□□□□□ -2.16
VPS38YLR360W YNL134CP53912 376 aaKnown RBP1.55□□□□□ -2.16
VPS38YLR360W YCL001W-AP87012 153 aa1.55□□□□□ -2.16
VPS38YLR360W YDR391CQ04170 232 aa1.55□□□□□ -2.16
VPS38YLR360W YLR283WQ05867 314 aa1.55□□□□□ -2.16
VPS38YLR360W NEJ1Q06148 342 aa1.55□□□□□ -2.16
VPS38YLR360W YLR036CQ07986 203 aa1.55□□□□□ -2.16
VPS38YLR360W YNG1Q08465 219 aa1.55□□□□□ -2.16
VPS38YLR360W MSA1Q08471 629 aa1.55□□□□□ -2.16
VPS38YLR360W SCP1Q08873 200 aa1.55□□□□□ -2.16
VPS38YLR360W CDC28P00546 298 aaKnown RBP1.54□□□□□ -2.16
VPS38YLR360W DDI2P0CH63 225 aa1.54□□□□□ -2.16
VPS38YLR360W DDI3P0CH64 225 aa1.54□□□□□ -2.16
VPS38YLR360W NHP6AP11632 93 aaKnown RBP1.54□□□□□ -2.16
VPS38YLR360W FCY2P17064 533 aa1.54□□□□□ -2.16
VPS38YLR360W AHC2P25649 128 aa1.54□□□□□ -2.16
VPS38YLR360W HYM1P32464 399 aa1.54□□□□□ -2.16
VPS38YLR360W YET1P35723 206 aa1.54□□□□□ -2.16
VPS38YLR360W PDX3P38075 228 aaKnown RBP1.54□□□□□ -2.16
VPS38YLR360W FMP23P38231 175 aa1.54□□□□□ -2.16
VPS38YLR360W AME1P38313 324 aa1.54□□□□□ -2.16
VPS38YLR360W YBR220CP38318 560 aa1.54□□□□□ -2.16
VPS38YLR360W YBR285WP38354 144 aa1.54□□□□□ -2.16
VPS38YLR360W TRM5P38793 499 aa1.54□□□□□ -2.16
VPS38YLR360W YER121WP40076 114 aa1.54□□□□□ -2.16
VPS38YLR360W YMR144WP40214 342 aaKnown RBP1.54□□□□□ -2.16
VPS38YLR360W IRC18P47056 224 aa1.54□□□□□ -2.16
VPS38YLR360W YAE1P47118 141 aaPredicted RBP1.54□□□□□ -2.16
VPS38YLR360W SNN1P48232 102 aa1.54□□□□□ -2.16
VPS38YLR360W SOL1P50278 321 aa1.54□□□□□ -2.16
VPS38YLR360W UBC12P52491 188 aa1.54□□□□□ -2.16
VPS38YLR360W YGR017WP53210 297 aa1.54□□□□□ -2.16
VPS38YLR360W NRK1P53915 240 aa1.54□□□□□ -2.16
VPS38YLR360W YNL010WP53981 241 aaKnown RBP1.54□□□□□ -2.16
VPS38YLR360W SAE3P89114 91 aa1.54□□□□□ -2.16
VPS38YLR360W FMN1Q03778 218 aa1.54□□□□□ -2.16
VPS38YLR360W AIM36Q03798 255 aa1.54□□□□□ -2.16
VPS38YLR360W YML096WQ04489 525 aa1.54□□□□□ -2.16
VPS38YLR360W SEN15Q04675 128 aa1.54□□□□□ -2.16
VPS38YLR360W SEI1Q06058 285 aa1.54□□□□□ -2.16
VPS38YLR360W HEM25Q07534 307 aa1.54□□□□□ -2.16
VPS38YLR360W ZEO1Q08245 113 aa1.54□□□□□ -2.16
VPS38YLR360W NIP7Q08962 181 aaKnown RBP1.54□□□□□ -2.16
VPS38YLR360W NSL1Q12143 216 aa1.54□□□□□ -2.16
VPS38YLR360W YOR342CQ12182 319 aa1.54□□□□□ -2.16
VPS38YLR360W PSF1Q12488 208 aa1.54□□□□□ -2.16
VPS38YLR360W WIP1Q2V2P8 89 aa1.54□□□□□ -2.16
VPS38YLR360W YPR014CQ6B0W2 109 aa1.54□□□□□ -2.16
VPS38YLR360W PET20Q99373 253 aa1.54□□□□□ -2.16
VPS38YLR360W CDC39P25655 2108 aaKnown RBP1.54□□□□□ -2.16
VPS38YLR360W PMD1P32634 1753 aa1.53□□□□□ -2.16
VPS38YLR360W CYR1P08678 2026 aaKnown RBP1.53□□□□□ -2.16
VPS38YLR360W HAP2P06774 265 aa1.53□□□□□ -2.16
VPS38YLR360W RHO1P06780 209 aaKnown RBP1.53□□□□□ -2.16
VPS38YLR360W ADE1P27616 306 aa1.53□□□□□ -2.16
VPS38YLR360W PTM1P32857 523 aa1.53□□□□□ -2.16
VPS38YLR360W YKR045CP36138 183 aa1.53□□□□□ -2.16
VPS38YLR360W MRPL15P36523 253 aa1.53□□□□□ -2.16
VPS38YLR360W YPT31P38555 223 aaKnown RBP1.53□□□□□ -2.16
VPS38YLR360W RMD6P39975 231 aa1.53□□□□□ -2.16
VPS38YLR360W NSE4P43124 402 aa1.53□□□□□ -2.16
VPS38YLR360W OTU1P43558 301 aa1.53□□□□□ -2.16
VPS38YLR360W ADO1P47143 340 aaKnown RBP1.53□□□□□ -2.16
VPS38YLR360W TIM13P53299 105 aa1.53□□□□□ -2.16
VPS38YLR360W YNL184CP53876 108 aa1.53□□□□□ -2.16
VPS38YLR360W YMR099CQ03161 297 aaKnown RBP1.53□□□□□ -2.16
VPS38YLR360W GAL83Q04739 417 aa1.53□□□□□ -2.16
VPS38YLR360W YDR278CQ05612 105 aa1.53□□□□□ -2.16
VPS38YLR360W CDC123Q05791 360 aa1.53□□□□□ -2.16
VPS38YLR360W FRQ1Q06389 190 aa1.53□□□□□ -2.16
VPS38YLR360W HRD1Q08109 551 aa1.53□□□□□ -2.16
VPS38YLR360W EFG1Q3E705 233 aaKnown RBP1.53□□□□□ -2.16
VPS38YLR360W YLR361C-AQ3E795 98 aa1.53□□□□□ -2.16
VPS38YLR360W YOR020W-AQ3E824 90 aa1.53□□□□□ -2.16
VPS38YLR360W SNF4P12904 322 aa1.52□□□□□ -2.17
VPS38YLR360W SEC59P20048 519 aa1.52□□□□□ -2.17
VPS38YLR360W IDP1P21954 428 aaKnown RBP1.52□□□□□ -2.17
VPS38YLR360W STP22P25604 385 aa1.52□□□□□ -2.17
VPS38YLR360W SSS1P35179 80 aa1.52□□□□□ -2.17
VPS38YLR360W RPF1P38805 295 aaKnown RBP1.52□□□□□ -2.17
VPS38YLR360W YHR180WP38868 163 aa1.52□□□□□ -2.17
VPS38YLR360W SEC72P39742 193 aaKnown RBP1.52□□□□□ -2.17
VPS38YLR360W CAT5P41735 233 aa1.52□□□□□ -2.17
VPS38YLR360W SER2P42941 309 aa1.52□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 77.7 ms