RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SGD1	YLR336C	CUP9	P41817	306 aa		0.93	□□□□□ -2.26
SGD1	YLR336C	YAE1	P47118	141 aa	Predicted RBP	0.93	□□□□□ -2.26
SGD1	YLR336C	THG1	P53215	237 aa	Known RBP	0.93	□□□□□ -2.26
SGD1	YLR336C	SHH4	Q06236	168 aa		0.93	□□□□□ -2.26
SGD1	YLR336C	PRP11	Q07350	266 aa	Predicted RBP	0.93	□□□□□ -2.26
SGD1	YLR336C	MPD1	Q12404	318 aa	Known RBP	0.93	□□□□□ -2.26
SGD1	YLR336C	CPR5	P35176	225 aa		0.92	□□□□□ -2.26
SGD1	YLR336C	YIP3	P53633	176 aa		0.92	□□□□□ -2.26
SGD1	YLR336C	YKL102C	P34249	101 aa		0.92	□□□□□ -2.26
SGD1	YLR336C	NVJ1	P38881	321 aa		0.92	□□□□□ -2.26
SGD1	YLR336C	SEC72	P39742	193 aa	Known RBP	0.92	□□□□□ -2.26
SGD1	YLR336C	FMP32	P43557	207 aa		0.92	□□□□□ -2.26
SGD1	YLR336C	SOL1	P50278	321 aa		0.92	□□□□□ -2.26
SGD1	YLR336C	PST2	Q12335	198 aa	Known RBP	0.92	□□□□□ -2.26
SGD1	YLR336C	ARO7	P32178	256 aa		0.91	□□□□□ -2.26
SGD1	YLR336C	NSG1	P38837	291 aa		0.91	□□□□□ -2.26
SGD1	YLR336C	YEL008W	P40001	126 aa		0.91	□□□□□ -2.26
SGD1	YLR336C	YFH7	P43591	353 aa		0.91	□□□□□ -2.26
SGD1	YLR336C	GPI17	Q04080	534 aa		0.91	□□□□□ -2.26
SGD1	YLR336C	YMR252C	Q04814	134 aa		0.91	□□□□□ -2.26
SGD1	YLR336C	YET3	Q07451	203 aa		0.91	□□□□□ -2.26
SGD1	YLR336C	YOR342C	Q12182	319 aa		0.91	□□□□□ -2.26
SGD1	YLR336C	ATP20	Q12233	115 aa		0.91	□□□□□ -2.26
SGD1	YLR336C	DGK1	Q12382	290 aa		0.91	□□□□□ -2.26
SGD1	YLR336C	YPR014C	Q6B0W2	109 aa		0.91	□□□□□ -2.26
SGD1	YLR336C	NTE1	Q04958	1679 aa		0.91	□□□□□ -2.26
SGD1	YLR336C	TMA22	P47089	198 aa	Predicted RBP	0.91	□□□□□ -2.26
SGD1	YLR336C	JAC1	P53193	184 aa		0.91	□□□□□ -2.26
SGD1	YLR336C	RCE1	Q03530	315 aa		0.91	□□□□□ -2.26
SGD1	YLR336C	HYR1	P40581	163 aa	Known RBP	0.9	□□□□□ -2.26
SGD1	YLR336C	SBH1	P52870	82 aa		0.9	□□□□□ -2.26
SGD1	YLR336C	CWC27	Q02770	301 aa		0.9	□□□□□ -2.26
SGD1	YLR336C	YLR412C-A	Q3E742	68 aa		0.9	□□□□□ -2.26
SGD1	YLR336C	MDN1	Q12019	4910 aa	Known RBP	0.9	□□□□□ -2.27
SGD1	YLR336C	YLR422W	Q06409	1932 aa		0.9	□□□□□ -2.27
SGD1	YLR336C	TRR1	P29509	319 aa	Known RBP	0.9	□□□□□ -2.27
SGD1	YLR336C	RPL35A	P0CX84	120 aa	Known RBP	0.89	□□□□□ -2.27
SGD1	YLR336C	RPL35B	P0CX85	120 aa	Known RBP	0.89	□□□□□ -2.27
SGD1	YLR336C	ECM4	P36156	370 aa		0.89	□□□□□ -2.27
SGD1	YLR336C	MAK5	P38112	773 aa	Predicted RBP	0.89	□□□□□ -2.27
SGD1	YLR336C	YHL042W	P38729	150 aa		0.89	□□□□□ -2.27
SGD1	YLR336C	FYV4	P38783	130 aa	Predicted RBP	0.89	□□□□□ -2.27
SGD1	YLR336C	HPA3	P39979	161 aa		0.89	□□□□□ -2.27
SGD1	YLR336C	RFC2	P40348	353 aa		0.89	□□□□□ -2.27
SGD1	YLR336C	YFL065C	P43539	102 aa		0.89	□□□□□ -2.27
SGD1	YLR336C	GAL83	Q04739	417 aa		0.89	□□□□□ -2.27
SGD1	YLR336C	GSP2	P32836	220 aa	Known RBP	0.89	□□□□□ -2.27
SGD1	YLR336C	RPB7	P34087	171 aa		0.89	□□□□□ -2.27
SGD1	YLR336C	EGD2	P38879	174 aa	Known RBP	0.89	□□□□□ -2.27
SGD1	YLR336C	EDC3	P39998	551 aa	Known RBP	0.89	□□□□□ -2.27
SGD1	YLR336C	NSA2	P40078	261 aa	Known RBP	0.89	□□□□□ -2.27
SGD1	YLR336C	YNL200C	P40165	246 aa	Known RBP	0.89	□□□□□ -2.27
SGD1	YLR336C	YLR460C	P54007	376 aa		0.89	□□□□□ -2.27
SGD1	YLR336C	YPR117W	Q06116	2489 aa		0.89	□□□□□ -2.27
SGD1	YLR336C	VAR1	P02381	398 aa		0.88	□□□□□ -2.27
SGD1	YLR336C	STP22	P25604	385 aa		0.88	□□□□□ -2.27
SGD1	YLR336C	RRT1	P38192	103 aa		0.88	□□□□□ -2.27
SGD1	YLR336C	DAS2	Q12084	232 aa		0.88	□□□□□ -2.27
SGD1	YLR336C	YCL042W	P25572	119 aa		0.88	□□□□□ -2.27
SGD1	YLR336C	SFK1	P35735	353 aa		0.88	□□□□□ -2.27
SGD1	YLR336C	YEL067C	P39978	195 aa		0.88	□□□□□ -2.27
SGD1	YLR336C	YHR212W-A	P0CX91	67 aa		0.87	□□□□□ -2.27
SGD1	YLR336C	SEC14	P24280	304 aa	Known RBP	0.87	□□□□□ -2.27
SGD1	YLR336C	CSH1	P38287	376 aa		0.87	□□□□□ -2.27
SGD1	YLR336C	SRP14	P38985	146 aa		0.87	□□□□□ -2.27
SGD1	YLR336C	ALB1	P47019	175 aa	Predicted RBP	0.87	□□□□□ -2.27
SGD1	YLR336C	HPT1	Q04178	221 aa	Known RBP	0.87	□□□□□ -2.27
SGD1	YLR336C	MPM1	P40364	252 aa		0.87	□□□□□ -2.27
SGD1	YLR336C	TTI2	P47168	421 aa		0.87	□□□□□ -2.27
SGD1	YLR336C	YNL140C	P53910	189 aa		0.87	□□□□□ -2.27
SGD1	YLR336C	PEX11	Q12462	236 aa		0.87	□□□□□ -2.27
SGD1	YLR336C	YCR023C	P25351	611 aa		0.87	□□□□□ -2.27
SGD1	YLR336C	RAD51	P25454	400 aa		0.87	□□□□□ -2.27
SGD1	YLR336C	PIR1	Q03178	341 aa		0.87	□□□□□ -2.27
SGD1	YLR336C	GIM5	Q04493	163 aa		0.87	□□□□□ -2.27
SGD1	YLR336C	SAC3	P46674	1301 aa		0.86	□□□□□ -2.27
SGD1	YLR336C	UPS3	Q04006	179 aa		0.86	□□□□□ -2.27
SGD1	YLR336C	UPS1	Q05776	175 aa		0.86	□□□□□ -2.27
SGD1	YLR336C	ESC1	Q03661	1658 aa	Known RBP	0.86	□□□□□ -2.27
SGD1	YLR336C	RRP17	Q04031	235 aa	Predicted RBP	0.86	□□□□□ -2.27
SGD1	YLR336C	RIM9	Q04734	239 aa		0.86	□□□□□ -2.27
SGD1	YLR336C	YOR015W	Q12169	119 aa		0.86	□□□□□ -2.27
SGD1	YLR336C	SEN2	P16658	377 aa		0.85	□□□□□ -2.27
SGD1	YLR336C	HSP30	P25619	332 aa		0.85	□□□□□ -2.27
SGD1	YLR336C	YER121W	P40076	114 aa		0.85	□□□□□ -2.27
SGD1	YLR336C	SOK1	P40317	901 aa		0.85	□□□□□ -2.27
SGD1	YLR336C	NSE4	P43124	402 aa		0.85	□□□□□ -2.27
SGD1	YLR336C	YGL235W	P53071	178 aa		0.85	□□□□□ -2.27
SGD1	YLR336C	HSK3	P69852	69 aa		0.85	□□□□□ -2.27
SGD1	YLR336C	DML1	Q03652	475 aa		0.85	□□□□□ -2.27
SGD1	YLR336C	YHP1	Q04116	353 aa		0.85	□□□□□ -2.27
SGD1	YLR336C	YOR214C	Q12282	236 aa		0.85	□□□□□ -2.27
SGD1	YLR336C	COA3	Q3E7B2	85 aa		0.85	□□□□□ -2.27
SGD1	YLR336C	YOR381W-A	Q3E804	55 aa		0.85	□□□□□ -2.27
SGD1	YLR336C	STF2	P16965	84 aa		0.85	□□□□□ -2.27
SGD1	YLR336C	VPS28	Q02767	242 aa		0.85	□□□□□ -2.27
SGD1	YLR336C	ELP6	Q04868	273 aa		0.85	□□□□□ -2.27
SGD1	YLR336C	ATG41	Q12048	136 aa		0.85	□□□□□ -2.27
SGD1	YLR336C	YLR050C	Q12155	161 aa	Known RBP	0.85	□□□□□ -2.27
SGD1	YLR336C	YKR005C	Q02203	525 aa		0.84	□□□□□ -2.27

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