RNA–Protein interactions for RNA: YLR250W

SSP120, Transcript of Protein of unknown function, yeast

Gene SSP120, Length 705 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSP120	YLR250W	YNG1	Q08465	219 aa		4.22	□□□□□ -1.73
SSP120	YLR250W	RAD28	Q12021	506 aa		4.22	□□□□□ -1.73
SSP120	YLR250W	POC4	Q12245	148 aa	Predicted RBP	4.22	□□□□□ -1.73
SSP120	YLR250W	YOR011W-A	Q3E807	68 aa		4.22	□□□□□ -1.73
SSP120	YLR250W	GPM1	P00950	247 aa	Known RBP	4.21	□□□□□ -1.74
SSP120	YLR250W	RPP1A	P05318	106 aa	Predicted RBP	4.21	□□□□□ -1.74
SSP120	YLR250W	ERV15	P38312	142 aa		4.21	□□□□□ -1.74
SSP120	YLR250W	LAG1	P38703	411 aa		4.21	□□□□□ -1.74
SSP120	YLR250W	GLE2	P40066	365 aa		4.21	□□□□□ -1.74
SSP120	YLR250W	YJL027C	P47063	138 aa	Predicted RBP	4.21	□□□□□ -1.74
SSP120	YLR250W	NIF3	P53081	288 aa		4.21	□□□□□ -1.74
SSP120	YLR250W	ARO8	P53090	500 aa	Known RBP	4.21	□□□□□ -1.74
SSP120	YLR250W	COX12	Q01519	83 aa		4.21	□□□□□ -1.74
SSP120	YLR250W	RDI1	Q12434	202 aa		4.21	□□□□□ -1.74
SSP120	YLR250W	TPI1	P00942	248 aa	Known RBP	4.2	□□□□□ -1.74
SSP120	YLR250W	YCR022C	P25620	114 aa		4.2	□□□□□ -1.74
SSP120	YLR250W	YBL071C	P38185	102 aa		4.2	□□□□□ -1.74
SSP120	YLR250W	POR2	P40478	281 aa		4.2	□□□□□ -1.74
SSP120	YLR250W	LSM1	P47017	172 aa	Known RBP	4.2	□□□□□ -1.74
SSP120	YLR250W	HCH1	P53834	153 aa		4.2	□□□□□ -1.74
SSP120	YLR250W	LSM7	P53905	115 aa	Known RBP	4.2	□□□□□ -1.74
SSP120	YLR250W	FYV6	P53913	173 aa		4.2	□□□□□ -1.74
SSP120	YLR250W	SPO19	Q03029	223 aa		4.2	□□□□□ -1.74
SSP120	YLR250W	YLR224W	Q05947	369 aa		4.2	□□□□□ -1.74
SSP120	YLR250W	FRQ1	Q06389	190 aa		4.2	□□□□□ -1.74
SSP120	YLR250W	RPN13	O13563	156 aa		4.19	□□□□□ -1.74
SSP120	YLR250W	SPT14	P32363	452 aa		4.19	□□□□□ -1.74
SSP120	YLR250W	YKL162C	P36052	402 aa		4.19	□□□□□ -1.74
SSP120	YLR250W	IES5	P40060	125 aa		4.19	□□□□□ -1.74
SSP120	YLR250W	LCB3	P47013	409 aa		4.19	□□□□□ -1.74
SSP120	YLR250W	PRM7	Q12459	698 aa		4.19	□□□□□ -1.74
SSP120	YLR250W	YCR016W	P25617	290 aa	Known RBP	4.18	□□□□□ -1.74
SSP120	YLR250W	POP5	P28005	173 aa		4.18	□□□□□ -1.74
SSP120	YLR250W	MRP17	P28778	131 aa		4.18	□□□□□ -1.74
SSP120	YLR250W	SIP1	P32578	815 aa		4.18	□□□□□ -1.74
SSP120	YLR250W	BDH1	P39714	382 aa		4.18	□□□□□ -1.74
SSP120	YLR250W	CAF16	P43569	289 aa		4.18	□□□□□ -1.74
SSP120	YLR250W	SMX3	P54999	86 aa	Predicted RBP	4.18	□□□□□ -1.74
SSP120	YLR250W	PHO92	Q06390	306 aa		4.18	□□□□□ -1.74
SSP120	YLR250W	POS5	Q06892	414 aa		4.18	□□□□□ -1.74
SSP120	YLR250W	YCT1	Q12235	531 aa		4.18	□□□□□ -1.74
SSP120	YLR250W	COA2	Q3E823	68 aa		4.18	□□□□□ -1.74
SSP120	YLR250W	YHR213W	P0CI67	198 aa		4.17	□□□□□ -1.74
SSP120	YLR250W	PRE9	P23638	258 aa	Known RBP	4.17	□□□□□ -1.74
SSP120	YLR250W	AVT5	P38176	459 aa		4.17	□□□□□ -1.74
SSP120	YLR250W	SNF11	P38956	169 aa		4.17	□□□□□ -1.74
SSP120	YLR250W	YIR035C	P40579	254 aa		4.17	□□□□□ -1.74
SSP120	YLR250W	RTS2	P40962	232 aa		4.17	□□□□□ -1.74
SSP120	YLR250W	HXT14	P42833	540 aa		4.17	□□□□□ -1.74
SSP120	YLR250W	TPN1	P53099	579 aa		4.17	□□□□□ -1.74
SSP120	YLR250W	LST7	P53237	242 aa		4.17	□□□□□ -1.74
SSP120	YLR250W	YAP1802	P53309	568 aa		4.17	□□□□□ -1.74
SSP120	YLR250W	DCS1	Q06151	350 aa		4.17	□□□□□ -1.74
SSP120	YLR250W	LDS2	Q08218	356 aa		4.17	□□□□□ -1.74
SSP120	YLR250W	ENV7	Q12003	364 aa		4.17	□□□□□ -1.74
SSP120	YLR250W	FCY2	P17064	533 aa		4.16	□□□□□ -1.74
SSP120	YLR250W	PPQ1	P32945	549 aa		4.16	□□□□□ -1.74
SSP120	YLR250W	YMR244W	Q04018	355 aa		4.16	□□□□□ -1.74
SSP120	YLR250W	YPS3	Q12303	508 aa		4.16	□□□□□ -1.74
SSP120	YLR250W	POM34	Q12445	299 aa		4.16	□□□□□ -1.74
SSP120	YLR250W	YMR316C-A	I2HB70	103 aa		4.15	□□□□□ -1.75
SSP120	YLR250W	PIS1	P06197	220 aa	Known RBP	4.15	□□□□□ -1.75
SSP120	YLR250W	CDC7	P06243	507 aa		4.15	□□□□□ -1.75
SSP120	YLR250W	SEC22	P22214	214 aa		4.15	□□□□□ -1.75
SSP120	YLR250W	CMC1	P36064	111 aa		4.15	□□□□□ -1.75
SSP120	YLR250W	CSH1	P38287	376 aa		4.15	□□□□□ -1.75
SSP120	YLR250W	RRF1	P38771	230 aa		4.15	□□□□□ -1.75
SSP120	YLR250W	YFR035C	P43608	114 aa		4.15	□□□□□ -1.75
SSP120	YLR250W	GPI2	P46961	280 aa		4.15	□□□□□ -1.75
SSP120	YLR250W	YJR015W	P47090	510 aa		4.15	□□□□□ -1.75
SSP120	YLR250W	GNP1	P48813	663 aa		4.15	□□□□□ -1.75
SSP120	YLR250W	YIF1	P53845	314 aa	Known RBP	4.15	□□□□□ -1.75
SSP120	YLR250W	YPL264C	Q08980	353 aa		4.15	□□□□□ -1.75
SSP120	YLR250W	TRM13	Q12383	476 aa		4.15	□□□□□ -1.75
SSP120	YLR250W	AIM45	Q12480	344 aa	Known RBP	4.15	□□□□□ -1.75
SSP120	YLR250W	TFB5	Q3E7C1	72 aa	Predicted RBP	4.15	□□□□□ -1.75
SSP120	YLR250W	SPS2	P08459	502 aa		4.14	□□□□□ -1.75
SSP120	YLR250W	NHP6B	P11633	99 aa	Known RBP	4.14	□□□□□ -1.75
SSP120	YLR250W	TIP1	P27654	210 aa	Predicted RBP	4.14	□□□□□ -1.75
SSP120	YLR250W	SUA5	P32579	426 aa		4.14	□□□□□ -1.75
SSP120	YLR250W	MIG3	P39943	394 aa		4.14	□□□□□ -1.75
SSP120	YLR250W	YER135C	P40082	130 aa		4.14	□□□□□ -1.75
SSP120	YLR250W	YKE4	P40544	346 aa		4.14	□□□□□ -1.75
SSP120	YLR250W	IMP2	P46972	177 aa		4.14	□□□□□ -1.75
SSP120	YLR250W	YIP3	P53633	176 aa		4.14	□□□□□ -1.75
SSP120	YLR250W	HAL1	Q01766	294 aa		4.14	□□□□□ -1.75
SSP120	YLR250W	RRT7	Q07829	113 aa		4.14	□□□□□ -1.75
SSP120	YLR250W	RPS25B	P0C0T4	108 aa	Known RBP	4.13	□□□□□ -1.75
SSP120	YLR250W	YCR001W	P25347	104 aa		4.13	□□□□□ -1.75
SSP120	YLR250W	UTP11	P34247	250 aa	Predicted RBP	4.13	□□□□□ -1.75
SSP120	YLR250W	UPS2	P35200	230 aa		4.13	□□□□□ -1.75
SSP120	YLR250W	SHB17	P36136	271 aa	Known RBP	4.13	□□□□□ -1.75
SSP120	YLR250W	ATG27	P46989	271 aa		4.13	□□□□□ -1.75
SSP120	YLR250W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
SSP120	YLR250W	STP4	Q07351	490 aa		4.13	□□□□□ -1.75
SSP120	YLR250W	YOL160W	Q08321	113 aa		4.13	□□□□□ -1.75
SSP120	YLR250W	AYT1	Q12226	474 aa		4.13	□□□□□ -1.75
SSP120	YLR250W	RPS25A	Q3E792	108 aa	Predicted RBP	4.13	□□□□□ -1.75
SSP120	YLR250W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
SSP120	YLR250W	YCR025C	P25352	136 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 109.3 ms