RNA–Protein interactions for RNA: YLR182W

SWI6, Transcript of Transcription cofactor, yeast

Gene SWI6, Length 2,412 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWI6	YLR182W	MSB2	P32334	1306 aa		0.67	□□□□□ -2.3
SWI6	YLR182W	CBF1	P17106	351 aa		0.67	□□□□□ -2.3
SWI6	YLR182W	BET1	P22804	142 aa		0.67	□□□□□ -2.3
SWI6	YLR182W	SKG1	P36169	355 aa		0.67	□□□□□ -2.3
SWI6	YLR182W	IKI1	P38874	309 aa		0.67	□□□□□ -2.3
SWI6	YLR182W	UBC7	Q02159	165 aa		0.67	□□□□□ -2.3
SWI6	YLR182W	YMR321C	Q04898	105 aa		0.67	□□□□□ -2.3
SWI6	YLR182W	YKL068W-A	Q3E826	78 aa		0.67	□□□□□ -2.3
SWI6	YLR182W	FAS2	P19097	1887 aa	Known RBP	0.66	□□□□□ -2.3
SWI6	YLR182W	FKS3	Q04952	1785 aa		0.66	□□□□□ -2.3
SWI6	YLR182W	CDC36	P06100	191 aa	Predicted RBP	0.66	□□□□□ -2.3
SWI6	YLR182W	PHO13	P19881	312 aa		0.66	□□□□□ -2.3
SWI6	YLR182W	SNC2	P33328	115 aa		0.66	□□□□□ -2.3
SWI6	YLR182W	YBR285W	P38354	144 aa		0.66	□□□□□ -2.3
SWI6	YLR182W	YER076C	P40049	302 aa		0.66	□□□□□ -2.3
SWI6	YLR182W	AIM25	P47140	327 aa		0.66	□□□□□ -2.3
SWI6	YLR182W	PGA2	P53903	129 aa		0.66	□□□□□ -2.3
SWI6	YLR182W	MZM1	Q03429	123 aa	Predicted RBP	0.66	□□□□□ -2.3
SWI6	YLR182W	YML108W	Q03759	105 aa		0.66	□□□□□ -2.3
SWI6	YLR182W	TOR1	P35169	2470 aa		0.66	□□□□□ -2.3
SWI6	YLR182W	KDX1	P36005	433 aa		0.66	□□□□□ -2.3
SWI6	YLR182W	RAD28	Q12021	506 aa		0.66	□□□□□ -2.3
SWI6	YLR182W	RIO1	Q12196	484 aa	Known RBP	0.66	□□□□□ -2.3
SWI6	YLR182W	URA5	P13298	226 aa	Known RBP	0.65	□□□□□ -2.31
SWI6	YLR182W	SEC11	P15367	167 aa		0.65	□□□□□ -2.31
SWI6	YLR182W	SPO13	P23624	291 aa		0.65	□□□□□ -2.31
SWI6	YLR182W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.65	□□□□□ -2.31	not detected
SWI6	YLR182W	TVP23	P38962	199 aa		0.65	□□□□□ -2.31
SWI6	YLR182W	ERJ5	P43613	295 aa	Predicted RBP	0.65	□□□□□ -2.31
SWI6	YLR182W	ATG40	Q99325	256 aa		0.65	□□□□□ -2.31
SWI6	YLR182W	UTP10	P42945	1769 aa	Known RBP	0.65	□□□□□ -2.31
SWI6	YLR182W	CSF1	Q12150	2958 aa		0.65	□□□□□ -2.31
SWI6	YLR182W	CUP1-1	P0CX80	61 aa		0.65	□□□□□ -2.31
SWI6	YLR182W	CUP1-2	P0CX81	61 aa		0.65	□□□□□ -2.31
SWI6	YLR182W	OCH1	P31755	480 aa		0.65	□□□□□ -2.31
SWI6	YLR182W	YKT6	P36015	200 aa	Known RBP	0.65	□□□□□ -2.31
SWI6	YLR182W	RMD6	P39975	231 aa		0.65	□□□□□ -2.31
SWI6	YLR182W	CUS2	P53830	285 aa	Predicted RBP	0.65	□□□□□ -2.31
SWI6	YLR182W	RNH202	Q05635	350 aa		0.65	□□□□□ -2.31
SWI6	YLR182W	GSC2	P40989	1895 aa		0.64	□□□□□ -2.31
SWI6	YLR182W	POR1	P04840	283 aa	Known RBP	0.64	□□□□□ -2.31
SWI6	YLR182W	CNB1	P25296	175 aa		0.64	□□□□□ -2.31
SWI6	YLR182W	YEL008W	P40001	126 aa		0.64	□□□□□ -2.31
SWI6	YLR182W	ARP3	P47117	449 aa	Known RBP	0.64	□□□□□ -2.31
SWI6	YLR182W	FUS2	Q05670	677 aa		0.64	□□□□□ -2.31
SWI6	YLR182W	MYO1	P08964	1928 aa		0.64	□□□□□ -2.31
SWI6	YLR182W	YBR032W	P38223	100 aa		0.64	□□□□□ -2.31
SWI6	YLR182W	YBR209W	P38311	105 aa		0.64	□□□□□ -2.31
SWI6	YLR182W	SMX2	P40204	77 aa	Known RBP	0.64	□□□□□ -2.31
SWI6	YLR182W	YPL073C	P40323	161 aa		0.64	□□□□□ -2.31
SWI6	YLR182W	SAY1	P53324	424 aa		0.64	□□□□□ -2.31
SWI6	YLR182W	TIM8	P57744	87 aa		0.64	□□□□□ -2.31
SWI6	YLR182W	ABP140	Q08641	628 aa	Known RBP	0.64	□□□□□ -2.31
SWI6	YLR182W	DGA1	Q08650	418 aa		0.64	□□□□□ -2.31
SWI6	YLR182W	YDR034W-B	Q6Q5X2	51 aa		0.64	□□□□□ -2.31
SWI6	YLR182W	JIP3	O13555	125 aa		0.63	□□□□□ -2.31
SWI6	YLR182W	VAR1	P02381	398 aa		0.63	□□□□□ -2.31
SWI6	YLR182W	CMD1	P06787	147 aa	Known RBP	0.63	□□□□□ -2.31
SWI6	YLR182W	MRS1	P07266	363 aa		0.63	□□□□□ -2.31
SWI6	YLR182W	SEC14	P24280	304 aa	Known RBP	0.63	□□□□□ -2.31
SWI6	YLR182W	TFC1	P32367	649 aa		0.63	□□□□□ -2.31
SWI6	YLR182W	ASF2	P32448	525 aa	Predicted RBP	0.63	□□□□□ -2.31
SWI6	YLR182W	YEL067C	P39978	195 aa		0.63	□□□□□ -2.31
SWI6	YLR182W	YER034W	P40022	185 aa	Known RBP	0.63	□□□□□ -2.31
SWI6	YLR182W	NOP19	P53317	196 aa	Predicted RBP	0.63	□□□□□ -2.31
SWI6	YLR182W	YPL225W	Q08971	146 aa	Known RBP	0.63	□□□□□ -2.31
SWI6	YLR182W	YNL146C-A	Q3E7Z1	64 aa		0.63	□□□□□ -2.31
SWI6	YLR182W	RIM15	P43565	1770 aa		0.63	□□□□□ -2.31
SWI6	YLR182W	HTB1	P02293	131 aa	Known RBP	0.63	□□□□□ -2.31
SWI6	YLR182W	HTB2	P02294	131 aa		0.63	□□□□□ -2.31
SWI6	YLR182W	RPL25	P04456	142 aa	Known RBP	0.63	□□□□□ -2.31
SWI6	YLR182W	APA2	P22108	325 aa		0.63	□□□□□ -2.31
SWI6	YLR182W	MGT1	P26188	188 aa		0.63	□□□□□ -2.31
SWI6	YLR182W	TVP38	P36164	337 aa		0.63	□□□□□ -2.31
SWI6	YLR182W	PDX3	P38075	228 aa	Known RBP	0.63	□□□□□ -2.31
SWI6	YLR182W	FLX1	P40464	311 aa		0.63	□□□□□ -2.31
SWI6	YLR182W	TIM13	P53299	105 aa		0.63	□□□□□ -2.31
SWI6	YLR182W	YNL247W	P53852	767 aa	Known RBP	0.63	□□□□□ -2.31
SWI6	YLR182W	FMP27	Q06179	2628 aa		0.63	□□□□□ -2.31
SWI6	YLR182W	YET3	Q07451	203 aa		0.63	□□□□□ -2.31
SWI6	YLR182W	DAS2	Q12084	232 aa		0.63	□□□□□ -2.31
SWI6	YLR182W	OCA6	Q12454	224 aa		0.63	□□□□□ -2.31
SWI6	YLR182W	YMR030W-A	Q3E760	96 aa		0.63	□□□□□ -2.31
SWI6	YLR182W	ODC2	Q99297	307 aa		0.63	□□□□□ -2.31
SWI6	YLR182W	HKR1	P41809	1802 aa		0.62	□□□□□ -2.31
SWI6	YLR182W	FIG2	P25653	1609 aa		0.62	□□□□□ -2.31
SWI6	YLR182W	MAG1	P22134	296 aa	Known RBP	0.62	□□□□□ -2.31
SWI6	YLR182W	PTC1	P35182	281 aa		0.62	□□□□□ -2.31
SWI6	YLR182W	FMP23	P38231	175 aa		0.62	□□□□□ -2.31
SWI6	YLR182W	HMF1	P40037	129 aa	Known RBP	0.62	□□□□□ -2.31
SWI6	YLR182W	YFL065C	P43539	102 aa		0.62	□□□□□ -2.31
SWI6	YLR182W	YAE1	P47118	141 aa	Predicted RBP	0.62	□□□□□ -2.31
SWI6	YLR182W	RTC4	P53850	401 aa		0.62	□□□□□ -2.31
SWI6	YLR182W	CSN9	Q03981	162 aa		0.62	□□□□□ -2.31
SWI6	YLR182W	ARO80	Q04052	950 aa		0.62	□□□□□ -2.31
SWI6	YLR182W	YMR252C	Q04814	134 aa		0.62	□□□□□ -2.31
SWI6	YLR182W	NAT3	Q06504	195 aa		0.62	□□□□□ -2.31
SWI6	YLR182W	YDR524C-B	Q3E6R4	66 aa		0.62	□□□□□ -2.31
SWI6	YLR182W	QCR7	P00128	127 aa		0.62	□□□□□ -2.31
SWI6	YLR182W	RPL22A	P05749	121 aa	Known RBP	0.62	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 93.5 ms