RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX4	YLR135W	RNH202	Q05635	350 aa		0.81	□□□□□ -2.28
SLX4	YLR135W	YPR174C	Q06616	221 aa	Predicted RBP	0.81	□□□□□ -2.28
SLX4	YLR135W	YLR053C	Q12026	108 aa		0.81	□□□□□ -2.28
SLX4	YLR135W	ATP20	Q12233	115 aa		0.81	□□□□□ -2.28
SLX4	YLR135W	FLO9	P39712	1322 aa		0.81	□□□□□ -2.28
SLX4	YLR135W	QCR2	P07257	368 aa		0.81	□□□□□ -2.28
SLX4	YLR135W	PAM17	P36147	197 aa		0.81	□□□□□ -2.28
SLX4	YLR135W	AME1	P38313	324 aa		0.81	□□□□□ -2.28
SLX4	YLR135W	TVP23	P38962	199 aa		0.81	□□□□□ -2.28
SLX4	YLR135W	THG1	P53215	237 aa	Known RBP	0.81	□□□□□ -2.28
SLX4	YLR135W	YNL033W	P53964	284 aa		0.81	□□□□□ -2.28
SLX4	YLR135W	TMA20	P89886	181 aa	Predicted RBP	0.81	□□□□□ -2.28
SLX4	YLR135W	YMR253C	Q04835	414 aa		0.81	□□□□□ -2.28
SLX4	YLR135W	PRP11	Q07350	266 aa	Predicted RBP	0.81	□□□□□ -2.28
SLX4	YLR135W	CSI2	Q08054	341 aa		0.81	□□□□□ -2.28
SLX4	YLR135W	DAS2	Q12084	232 aa		0.81	□□□□□ -2.28
SLX4	YLR135W	YOR015W	Q12169	119 aa		0.81	□□□□□ -2.28
SLX4	YLR135W	YOR214C	Q12282	236 aa		0.81	□□□□□ -2.28
SLX4	YLR135W	RDI1	Q12434	202 aa		0.81	□□□□□ -2.28
SLX4	YLR135W	MDM35	O60200	86 aa		0.8	□□□□□ -2.28
SLX4	YLR135W	GPA2	P10823	449 aa		0.8	□□□□□ -2.28
SLX4	YLR135W	NSP1	P14907	823 aa	Known RBP	0.8	□□□□□ -2.28
SLX4	YLR135W	UBC6	P33296	250 aa	Predicted RBP	0.8	□□□□□ -2.28
SLX4	YLR135W	YHL018W	P38744	120 aa	Predicted RBP	0.8	□□□□□ -2.28
SLX4	YLR135W	YPL073C	P40323	161 aa		0.8	□□□□□ -2.28
SLX4	YLR135W	FLX1	P40464	311 aa		0.8	□□□□□ -2.28
SLX4	YLR135W	YAE1	P47118	141 aa	Predicted RBP	0.8	□□□□□ -2.28
SLX4	YLR135W	SOL1	P50278	321 aa		0.8	□□□□□ -2.28
SLX4	YLR135W	YLR422W	Q06409	1932 aa		0.8	□□□□□ -2.28
SLX4	YLR135W	YOL162W	P0CF19	215 aa		0.8	□□□□□ -2.28
SLX4	YLR135W	RPL2A	P0CX45	254 aa	Known RBP	0.8	□□□□□ -2.28
SLX4	YLR135W	RPL2B	P0CX46	254 aa	Known RBP	0.8	□□□□□ -2.28
SLX4	YLR135W	HSP30	P25619	332 aa		0.8	□□□□□ -2.28
SLX4	YLR135W	RME1	P32338	300 aa	Known RBP	0.8	□□□□□ -2.28
SLX4	YLR135W	SFK1	P35735	353 aa		0.8	□□□□□ -2.28
SLX4	YLR135W	RRT1	P38192	103 aa		0.8	□□□□□ -2.28
SLX4	YLR135W	GLR1	P41921	483 aa	Known RBP	0.8	□□□□□ -2.28
SLX4	YLR135W	EFM5	P53200	248 aa	Known RBP	0.8	□□□□□ -2.28
SLX4	YLR135W	YHR007C-A	Q07074	71 aa		0.8	□□□□□ -2.28
SLX4	YLR135W	NSL1	Q12143	216 aa		0.8	□□□□□ -2.28
SLX4	YLR135W	YOR381W-A	Q3E804	55 aa		0.8	□□□□□ -2.28
SLX4	YLR135W	STP22	P25604	385 aa		0.79	□□□□□ -2.28
SLX4	YLR135W	GSP2	P32836	220 aa	Known RBP	0.79	□□□□□ -2.28
SLX4	YLR135W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.79	□□□□□ -2.28	not detected
SLX4	YLR135W	HPA3	P39979	161 aa		0.79	□□□□□ -2.28
SLX4	YLR135W	ALB1	P47019	175 aa	Predicted RBP	0.79	□□□□□ -2.28
SLX4	YLR135W	TIM13	P53299	105 aa		0.79	□□□□□ -2.28
SLX4	YLR135W	YKR005C	Q02203	525 aa		0.79	□□□□□ -2.28
SLX4	YLR135W	GRX5	Q02784	150 aa		0.79	□□□□□ -2.28
SLX4	YLR135W	DIG2	Q03373	323 aa	Known RBP	0.79	□□□□□ -2.28
SLX4	YLR135W	DML1	Q03652	475 aa		0.79	□□□□□ -2.28
SLX4	YLR135W	THI74	Q04083	370 aa		0.79	□□□□□ -2.28
SLX4	YLR135W	GAL83	Q04739	417 aa		0.79	□□□□□ -2.28
SLX4	YLR135W	YPR013C	Q12145	317 aa		0.79	□□□□□ -2.28
SLX4	YLR135W	EFG1	Q3E705	233 aa	Known RBP	0.79	□□□□□ -2.28
SLX4	YLR135W	ACC1	Q00955	2233 aa	Known RBP	0.79	□□□□□ -2.28
SLX4	YLR135W	COX8	P04039	78 aa		0.79	□□□□□ -2.28
SLX4	YLR135W	MAK31	P23059	88 aa		0.79	□□□□□ -2.28
SLX4	YLR135W	EDC3	P39998	551 aa	Known RBP	0.79	□□□□□ -2.28
SLX4	YLR135W	NQM1	P53228	333 aa	Predicted RBP	0.79	□□□□□ -2.28
SLX4	YLR135W	VPS28	Q02767	242 aa		0.79	□□□□□ -2.28
SLX4	YLR135W	CWC27	Q02770	301 aa		0.79	□□□□□ -2.28
SLX4	YLR135W	MAK3	Q03503	176 aa		0.79	□□□□□ -2.28
SLX4	YLR135W	UBR2	Q07963	1872 aa		0.78	□□□□□ -2.28
SLX4	YLR135W	UBI4	P0CG63	381 aa	Known RBP	0.78	□□□□□ -2.28
SLX4	YLR135W	FPR1	P20081	114 aa	Known RBP	0.78	□□□□□ -2.28
SLX4	YLR135W	YCR023C	P25351	611 aa		0.78	□□□□□ -2.28
SLX4	YLR135W	RPB7	P34087	171 aa		0.78	□□□□□ -2.28
SLX4	YLR135W	NSE4	P43124	402 aa		0.78	□□□□□ -2.28
SLX4	YLR135W	PAC10	P48363	199 aa		0.78	□□□□□ -2.28
SLX4	YLR135W	LSM3	P57743	89 aa	Known RBP	0.78	□□□□□ -2.28
SLX4	YLR135W	RCE1	Q03530	315 aa		0.78	□□□□□ -2.28
SLX4	YLR135W	YHP1	Q04116	353 aa		0.78	□□□□□ -2.28
SLX4	YLR135W	SYM1	Q06563	197 aa		0.78	□□□□□ -2.28
SLX4	YLR135W	YLR046C	Q12253	270 aa		0.78	□□□□□ -2.28
SLX4	YLR135W	CPR5	P35176	225 aa		0.77	□□□□□ -2.29
SLX4	YLR135W	FIG1	P38224	298 aa		0.77	□□□□□ -2.29
SLX4	YLR135W	CSH1	P38287	376 aa		0.77	□□□□□ -2.29
SLX4	YLR135W	SLM6	P38343	150 aa		0.77	□□□□□ -2.29
SLX4	YLR135W	YHL042W	P38729	150 aa		0.77	□□□□□ -2.29
SLX4	YLR135W	YEL073C	P39974	107 aa		0.77	□□□□□ -2.29
SLX4	YLR135W	MPM1	P40364	252 aa		0.77	□□□□□ -2.29
SLX4	YLR135W	DLS1	P40366	167 aa		0.77	□□□□□ -2.29
SLX4	YLR135W	HYR1	P40581	163 aa	Known RBP	0.77	□□□□□ -2.29
SLX4	YLR135W	YFH7	P43591	353 aa		0.77	□□□□□ -2.29
SLX4	YLR135W	SBH1	P52870	82 aa		0.77	□□□□□ -2.29
SLX4	YLR135W	YGL101W	P53144	215 aa		0.77	□□□□□ -2.29
SLX4	YLR135W	UBC7	Q02159	165 aa		0.77	□□□□□ -2.29
SLX4	YLR135W	PIR1	Q03178	341 aa		0.77	□□□□□ -2.29
SLX4	YLR135W	RRP17	Q04031	235 aa	Predicted RBP	0.77	□□□□□ -2.29
SLX4	YLR135W	YMR252C	Q04814	134 aa		0.77	□□□□□ -2.29
SLX4	YLR135W	UPS1	Q05776	175 aa		0.77	□□□□□ -2.29
SLX4	YLR135W	FYV12	Q08559	129 aa		0.77	□□□□□ -2.29
SLX4	YLR135W	FIT2	Q08906	153 aa		0.77	□□□□□ -2.29
SLX4	YLR135W	PST2	Q12335	198 aa	Known RBP	0.77	□□□□□ -2.29
SLX4	YLR135W	YNL146C-A	Q3E7Z1	64 aa		0.77	□□□□□ -2.29
SLX4	YLR135W	RAD6	P06104	172 aa		0.77	□□□□□ -2.29
SLX4	YLR135W	QCR8	P08525	94 aa		0.77	□□□□□ -2.29
SLX4	YLR135W	DER1	P38307	211 aa		0.77	□□□□□ -2.29
SLX4	YLR135W	RIO2	P40160	425 aa	Known RBP	0.77	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 59 ms