RNA–Protein interactions for RNA: YLR066W

SPC3, Transcript of Subunit of signal peptidase complex, yeastyeast

Gene SPC3, Length 555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC3YLR066W QCR2P07257 368 aa2.48□□□□□ -2.01
SPC3YLR066W GPA2P10823 449 aa2.48□□□□□ -2.01
SPC3YLR066W ARC19P33204 171 aaKnown RBP2.48□□□□□ -2.01
SPC3YLR066W UPS2P35200 230 aa2.48□□□□□ -2.01
SPC3YLR066W YPR127WQ06494 345 aa2.48□□□□□ -2.01
SPC3YLR066W YHR007C-AQ07074 71 aa2.48□□□□□ -2.01
SPC3YLR066W YLR053CQ12026 108 aa2.48□□□□□ -2.01
SPC3YLR066W RME1P32338 300 aaKnown RBP2.47□□□□□ -2.01
SPC3YLR066W GRX5Q02784 150 aa2.47□□□□□ -2.01
SPC3YLR066W DIG2Q03373 323 aaKnown RBP2.47□□□□□ -2.01
SPC3YLR066W DAS2Q12084 232 aa2.47□□□□□ -2.01
SPC3YLR066W ATP20Q12233 115 aa2.47□□□□□ -2.01
SPC3YLR066W MDM35O60200 86 aa2.46□□□□□ -2.02
SPC3YLR066W NUF2P33895 451 aa2.46□□□□□ -2.02
SPC3YLR066W TIM13P53299 105 aa2.46□□□□□ -2.02
SPC3YLR066W HSK3P69852 69 aa2.46□□□□□ -2.02
SPC3YLR066W TMA20P89886 181 aaPredicted RBP2.46□□□□□ -2.02
SPC3YLR066W RNH202Q05635 350 aa2.46□□□□□ -2.02
SPC3YLR066W SMD2Q06217 110 aaKnown RBP2.46□□□□□ -2.02
SPC3YLR066W YPR013CQ12145 317 aa2.46□□□□□ -2.02
SPC3YLR066W STP22P25604 385 aa2.45□□□□□ -2.02
SPC3YLR066W SFK1P35735 353 aa2.45□□□□□ -2.02
SPC3YLR066W AME1P38313 324 aa2.45□□□□□ -2.02
SPC3YLR066W YNL200CP40165 246 aaKnown RBP2.45□□□□□ -2.02
SPC3YLR066W SOL1P50278 321 aa2.45□□□□□ -2.02
SPC3YLR066W MZM1Q03429 123 aaPredicted RBP2.45□□□□□ -2.02
SPC3YLR066W YOR214CQ12282 236 aa2.45□□□□□ -2.02
SPC3YLR066W RDI1Q12434 202 aa2.45□□□□□ -2.02
SPC3YLR066W DNA2P38859 1522 aa2.44□□□□□ -2.02
SPC3YLR066W RPL2AP0CX45 254 aaKnown RBP2.44□□□□□ -2.02
SPC3YLR066W RPL2BP0CX46 254 aaKnown RBP2.44□□□□□ -2.02
SPC3YLR066W RRT1P38192 103 aa2.44□□□□□ -2.02
SPC3YLR066W YHL018WP38744 120 aaPredicted RBP2.44□□□□□ -2.02
SPC3YLR066W SBH1P52870 82 aa2.44□□□□□ -2.02
SPC3YLR066W THG1P53215 237 aaKnown RBP2.44□□□□□ -2.02
SPC3YLR066W VPS28Q02767 242 aa2.44□□□□□ -2.02
SPC3YLR066W MAK3Q03503 176 aa2.44□□□□□ -2.02
SPC3YLR066W GAL83Q04739 417 aa2.44□□□□□ -2.02
SPC3YLR066W YOR015WQ12169 119 aa2.44□□□□□ -2.02
SPC3YLR066W QCR8P08525 94 aa2.43□□□□□ -2.02
SPC3YLR066W HSP30P25619 332 aa2.43□□□□□ -2.02
SPC3YLR066W FYV4P38783 130 aaPredicted RBP2.43□□□□□ -2.02
SPC3YLR066W GLR1P41921 483 aaKnown RBP2.43□□□□□ -2.02
SPC3YLR066W COX8P04039 78 aa2.42□□□□□ -2.02
SPC3YLR066W FPR1P20081 114 aaKnown RBP2.42□□□□□ -2.02
SPC3YLR066W GSP2P32836 220 aaKnown RBP2.42□□□□□ -2.02
SPC3YLR066W YKR005CQ02203 525 aa2.42□□□□□ -2.02
SPC3YLR066W FYV12Q08559 129 aa2.42□□□□□ -2.02
SPC3YLR066W NSL1Q12143 216 aa2.42□□□□□ -2.02
SPC3YLR066W FLX1P40464 311 aa2.41□□□□□ -2.02
SPC3YLR066W YAE1P47118 141 aaPredicted RBP2.41□□□□□ -2.02
SPC3YLR066W RCE1Q03530 315 aa2.41□□□□□ -2.02
SPC3YLR066W THI74Q04083 370 aa2.41□□□□□ -2.02
SPC3YLR066W YCR023CP25351 611 aa2.4□□□□□ -2.03
SPC3YLR066W HPA3P39979 161 aa2.4□□□□□ -2.03
SPC3YLR066W EDC3P39998 551 aaKnown RBP2.4□□□□□ -2.03
SPC3YLR066W ALB1P47019 175 aaPredicted RBP2.4□□□□□ -2.03
SPC3YLR066W UBC6P33296 250 aaPredicted RBP2.39□□□□□ -2.03
SPC3YLR066W YFH7P43591 353 aa2.39□□□□□ -2.03
SPC3YLR066W YGL101WP53144 215 aa2.39□□□□□ -2.03
SPC3YLR066W EFM5P53200 248 aaKnown RBP2.39□□□□□ -2.03
SPC3YLR066W CWC27Q02770 301 aa2.39□□□□□ -2.03
SPC3YLR066W PIR1Q03178 341 aa2.39□□□□□ -2.03
SPC3YLR066W YDR476CQ03362 224 aa2.39□□□□□ -2.03
SPC3YLR066W DML1Q03652 475 aa2.39□□□□□ -2.03
SPC3YLR066W FIT2Q08906 153 aa2.39□□□□□ -2.03
SPC3YLR066W YNL146C-AQ3E7Z1 64 aa2.39□□□□□ -2.03
SPC3YLR066W KOG1P38873 1557 aa2.39□□□□□ -2.03
SPC3YLR066W RAD6P06104 172 aa2.38□□□□□ -2.03
SPC3YLR066W CPR5P35176 225 aa2.38□□□□□ -2.03
SPC3YLR066W DER1P38307 211 aa2.38□□□□□ -2.03
SPC3YLR066W HYR1P40581 163 aaKnown RBP2.38□□□□□ -2.03
SPC3YLR066W RRP17Q04031 235 aaPredicted RBP2.38□□□□□ -2.03
SPC3YLR066W YRA2P36036 203 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
SPC3YLR066W FIG1P38224 298 aa2.37□□□□□ -2.03
SPC3YLR066W CSH1P38287 376 aa2.37□□□□□ -2.03
SPC3YLR066W RIO2P40160 425 aaKnown RBP2.37□□□□□ -2.03
SPC3YLR066W NSE4P43124 402 aa2.37□□□□□ -2.03
SPC3YLR066W YGL235WP53071 178 aa2.37□□□□□ -2.03
SPC3YLR066W YOR381W-AQ3E804 55 aa2.37□□□□□ -2.03
SPC3YLR066W MSB2P32334 1306 aa2.37□□□□□ -2.03
SPC3YLR066W RPB7P34087 171 aa2.36□□□□□ -2.03
SPC3YLR066W LSM3P57743 89 aaKnown RBP2.36□□□□□ -2.03
SPC3YLR066W SYM1Q06563 197 aa2.36□□□□□ -2.03
SPC3YLR066W EFG1Q3E705 233 aaKnown RBP2.36□□□□□ -2.03
SPC3YLR066W TRM3Q07527 1436 aa2.35□□□□□ -2.03
SPC3YLR066W RPS28BP0C0X0 67 aaKnown RBP2.35□□□□□ -2.03
SPC3YLR066W UBI4P0CG63 381 aaKnown RBP2.35□□□□□ -2.03
SPC3YLR066W MAK31P23059 88 aa2.35□□□□□ -2.03
SPC3YLR066W YHL042WP38729 150 aa2.35□□□□□ -2.03
SPC3YLR066W NQM1P53228 333 aaPredicted RBP2.35□□□□□ -2.03
SPC3YLR066W YHP1Q04116 353 aa2.35□□□□□ -2.03
SPC3YLR066W UPS1Q05776 175 aa2.35□□□□□ -2.03
SPC3YLR066W RPS28AQ3E7X9 67 aaPredicted RBP2.35□□□□□ -2.03
SPC3YLR066W SPA2P23201 1466 aaKnown RBP2.34□□□□□ -2.03
SPC3YLR066W STF2P16965 84 aa2.34□□□□□ -2.03
SPC3YLR066W YEL073CP39974 107 aa2.34□□□□□ -2.03
SPC3YLR066W PAC10P48363 199 aa2.34□□□□□ -2.03
SPC3YLR066W UBC7Q02159 165 aa2.34□□□□□ -2.03
SPC3YLR066W UPS3Q04006 179 aa2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 76.7 ms