RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W YJR096WP47137 282 aa6.22□□□□□ -1.41
SNF7YLR025W BNS1P50084 137 aa6.22□□□□□ -1.41
SNF7YLR025W YOS1Q3E834 85 aa6.22□□□□□ -1.41
SNF7YLR025W RPL9AP05738 191 aaKnown RBP6.21□□□□□ -1.42
SNF7YLR025W YMR31P19955 123 aa6.21□□□□□ -1.42
SNF7YLR025W HMX1P32339 317 aa6.21□□□□□ -1.42
SNF7YLR025W CUE1P38428 203 aa6.21□□□□□ -1.42
SNF7YLR025W NSA2P40078 261 aaKnown RBP6.21□□□□□ -1.42
SNF7YLR025W ARP3P47117 449 aaKnown RBP6.21□□□□□ -1.42
SNF7YLR025W RPL9BP51401 191 aaKnown RBP6.21□□□□□ -1.42
SNF7YLR025W RPN14P53196 417 aa6.21□□□□□ -1.42
SNF7YLR025W APS2Q00381 147 aa6.21□□□□□ -1.42
SNF7YLR025W RPL21AQ02753 160 aaKnown RBP6.21□□□□□ -1.42
SNF7YLR025W ATC1Q04005 294 aa6.21□□□□□ -1.42
SNF7YLR025W AVO2Q04749 426 aa6.21□□□□□ -1.42
SNF7YLR025W ARR3Q06598 404 aa6.21□□□□□ -1.42
SNF7YLR025W RPL21BQ12672 160 aaKnown RBP6.21□□□□□ -1.42
SNF7YLR025W VPS63O13549 108 aa6.2□□□□□ -1.42
SNF7YLR025W RPS23AP0CX29 145 aaKnown RBP6.2□□□□□ -1.42
SNF7YLR025W RPS23BP0CX30 145 aa6.2□□□□□ -1.42
SNF7YLR025W YKL075CP36083 450 aa6.2□□□□□ -1.42
SNF7YLR025W DER1P38307 211 aa6.2□□□□□ -1.42
SNF7YLR025W SUR2P38992 349 aa6.2□□□□□ -1.42
SNF7YLR025W CRZ1P53968 678 aa6.2□□□□□ -1.42
SNF7YLR025W DYN2Q02647 92 aa6.2□□□□□ -1.42
SNF7YLR025W YMR007WQ03675 126 aa6.2□□□□□ -1.42
SNF7YLR025W CTR3Q06686 241 aa6.2□□□□□ -1.42
SNF7YLR025W COX17Q12287 69 aa6.2□□□□□ -1.42
SNF7YLR025W YLR118CQ12354 227 aa6.2□□□□□ -1.42
SNF7YLR025W YGL258W-AQ3E740 77 aa6.2□□□□□ -1.42
SNF7YLR025W BOL1Q3E793 110 aa6.2□□□□□ -1.42
SNF7YLR025W RPS22AP0C0W1 130 aaKnown RBP6.19□□□□□ -1.42
SNF7YLR025W NHP6AP11632 93 aaKnown RBP6.19□□□□□ -1.42
SNF7YLR025W YBL059WP34224 193 aa6.19□□□□□ -1.42
SNF7YLR025W YBR013CP38215 129 aa6.19□□□□□ -1.42
SNF7YLR025W YBR220CP38318 560 aa6.19□□□□□ -1.42
SNF7YLR025W YMR262WP38430 313 aa6.19□□□□□ -1.42
SNF7YLR025W YGR269WP40326 108 aa6.19□□□□□ -1.42
SNF7YLR025W GON7P46984 123 aa6.19□□□□□ -1.42
SNF7YLR025W YDR114CQ04597 100 aa6.19□□□□□ -1.42
SNF7YLR025W NAT3Q06504 195 aa6.19□□□□□ -1.42
SNF7YLR025W PML1Q07930 204 aaPredicted RBP6.19□□□□□ -1.42
SNF7YLR025W FMP49A0A023PZB3 126 aa6.18□□□□□ -1.42
SNF7YLR025W RIP1P08067 215 aa6.18□□□□□ -1.42
SNF7YLR025W PAU19P0CE85 124 aa6.18□□□□□ -1.42
SNF7YLR025W PAU21P0CE86 164 aa6.18□□□□□ -1.42
SNF7YLR025W PAU22P0CE87 164 aa6.18□□□□□ -1.42
SNF7YLR025W PAU3P25610 124 aa6.18□□□□□ -1.42
SNF7YLR025W ATG15P25641 520 aa6.18□□□□□ -1.42
SNF7YLR025W COQ3P27680 312 aa6.18□□□□□ -1.42
SNF7YLR025W TCA17P32613 152 aa6.18□□□□□ -1.42
SNF7YLR025W IMD2P38697 523 aaKnown RBP6.18□□□□□ -1.42
SNF7YLR025W GZF3P42944 551 aaKnown RBP6.18□□□□□ -1.42
SNF7YLR025W PAU5P43575 122 aa6.18□□□□□ -1.42
SNF7YLR025W YJR015WP47090 510 aa6.18□□□□□ -1.42
SNF7YLR025W MIC27P50945 234 aa6.18□□□□□ -1.42
SNF7YLR025W HCH1P53834 153 aa6.18□□□□□ -1.42
SNF7YLR025W SHH3Q04487 196 aa6.18□□□□□ -1.42
SNF7YLR025W LOA1Q06508 300 aa6.18□□□□□ -1.42
SNF7YLR025W DCN1Q12395 269 aa6.18□□□□□ -1.42
SNF7YLR025W RAX2Q12465 1220 aa6.18□□□□□ -1.42
SNF7YLR025W DFR1P07807 211 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
SNF7YLR025W YGL010WP25338 174 aa6.17□□□□□ -1.42
SNF7YLR025W RPS2P25443 254 aaKnown RBP6.17□□□□□ -1.42
SNF7YLR025W YOX1P34161 385 aa6.17□□□□□ -1.42
SNF7YLR025W CPR5P35176 225 aa6.17□□□□□ -1.42
SNF7YLR025W MRPL28P36527 147 aa6.17□□□□□ -1.42
SNF7YLR025W LOC1P43586 204 aaPredicted RBP6.17□□□□□ -1.42
SNF7YLR025W HIT1P46973 164 aa6.17□□□□□ -1.42
SNF7YLR025W ATG27P46989 271 aa6.17□□□□□ -1.42
SNF7YLR025W TAX4P47030 604 aa6.17□□□□□ -1.42
SNF7YLR025W SSU72P53538 206 aaPredicted RBP6.17□□□□□ -1.42
SNF7YLR025W SMM1P53720 384 aaKnown RBP6.17□□□□□ -1.42
SNF7YLR025W YPL108WQ02872 168 aaPredicted RBP6.17□□□□□ -1.42
SNF7YLR025W USV1Q12132 391 aa6.17□□□□□ -1.42
SNF7YLR025W POC4Q12245 148 aaPredicted RBP6.17□□□□□ -1.42
SNF7YLR025W ERV2Q12284 196 aa6.17□□□□□ -1.42
SNF7YLR025W SMT3Q12306 101 aaKnown RBP6.17□□□□□ -1.42
SNF7YLR025W YOP1Q12402 180 aa6.17□□□□□ -1.42
SNF7YLR025W TOR2P32600 2474 aaKnown RBP6.17□□□□□ -1.42
SNF7YLR025W DAL3P32459 195 aa6.16□□□□□ -1.42
SNF7YLR025W DAD2P36162 133 aa6.16□□□□□ -1.42
SNF7YLR025W GET2P40056 285 aa6.16□□□□□ -1.42
SNF7YLR025W LSM4P40070 187 aaKnown RBP6.16□□□□□ -1.42
SNF7YLR025W YER121WP40076 114 aa6.16□□□□□ -1.42
SNF7YLR025W PIR5P46999 287 aa6.16□□□□□ -1.42
SNF7YLR025W BOR1P53838 576 aa6.16□□□□□ -1.42
SNF7YLR025W YDL218WQ07629 317 aa6.16□□□□□ -1.42
SNF7YLR025W YPR063CQ12160 140 aa6.16□□□□□ -1.42
SNF7YLR025W MSL5Q12186 476 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
SNF7YLR025W YPS3Q12303 508 aa6.16□□□□□ -1.42
SNF7YLR025W SEN1Q00416 2231 aaKnown RBP6.15□□□□□ -1.42
SNF7YLR025W RPL39P04650 51 aa6.15□□□□□ -1.42
SNF7YLR025W ATP10P18496 279 aa6.15□□□□□ -1.42
SNF7YLR025W CYB5P40312 120 aa6.15□□□□□ -1.42
SNF7YLR025W SUR7P54003 302 aa6.15□□□□□ -1.42
SNF7YLR025W CUE4Q04201 117 aaPredicted RBP6.15□□□□□ -1.42
SNF7YLR025W COA6Q3E846 104 aa6.15□□□□□ -1.42
SNF7YLR025W BGL2P15703 313 aaKnown RBP6.14□□□□□ -1.43
SNF7YLR025W RPS0AP32905 252 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 55.5 ms