RNA–Protein interactions for RNA: YLL029W

FRA1, Transcript of Protein involved in negative regulation of iron regulon transcription, yeast

Gene FRA1, Length 2,250 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRA1	YLL029W	YBR032W	P38223	100 aa		7	□□□□□ -1.29
FRA1	YLL029W	PRM5	P40476	318 aa		7	□□□□□ -1.29
FRA1	YLL029W	MID1	P41821	548 aa		7	□□□□□ -1.29
FRA1	YLL029W	SMD3	P43321	101 aa	Known RBP	7	□□□□□ -1.29
FRA1	YLL029W	TOS8	P53147	276 aa		7	□□□□□ -1.29
FRA1	YLL029W	SMM1	P53720	384 aa	Known RBP	7	□□□□□ -1.29
FRA1	YLL029W	PRM3	Q08931	133 aa		7	□□□□□ -1.29
FRA1	YLL029W	FAB1	P34756	2278 aa		7	□□□□□ -1.29
FRA1	YLL029W	MBF1	O14467	151 aa	Known RBP	6.99	□□□□□ -1.29
FRA1	YLL029W	SNF4	P12904	322 aa		6.99	□□□□□ -1.29
FRA1	YLL029W	RPS2	P25443	254 aa	Known RBP	6.99	□□□□□ -1.29
FRA1	YLL029W	YMC1	P32331	307 aa		6.99	□□□□□ -1.29
FRA1	YLL029W	UTR5	P32630	166 aa		6.99	□□□□□ -1.29
FRA1	YLL029W	YSC84	P32793	468 aa		6.99	□□□□□ -1.29
FRA1	YLL029W	YFR054C	P43622	192 aa		6.99	□□□□□ -1.29
FRA1	YLL029W	BAT2	P47176	376 aa	Known RBP	6.99	□□□□□ -1.29
FRA1	YLL029W	TOS2	P50078	622 aa		6.99	□□□□□ -1.29
FRA1	YLL029W	YMR082C	Q04276	118 aa		6.99	□□□□□ -1.29
FRA1	YLL029W	RRS1	Q08746	203 aa	Known RBP	6.99	□□□□□ -1.29
FRA1	YLL029W	PRS5	Q12265	496 aa	Known RBP	6.99	□□□□□ -1.29
FRA1	YLL029W	COX1	P00401	534 aa		6.99	□□□□□ -1.29
FRA1	YLL029W	OPI3	P05375	206 aa		6.99	□□□□□ -1.29
FRA1	YLL029W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	6.99	□□□□□ -1.29	not detected
FRA1	YLL029W	MKK1	P32490	508 aa		6.99	□□□□□ -1.29
FRA1	YLL029W	VMA21	P41806	77 aa		6.99	□□□□□ -1.29
FRA1	YLL029W	RPS10A	Q08745	105 aa	Predicted RBP	6.99	□□□□□ -1.29
FRA1	YLL029W	SNX3	Q08826	162 aa	Known RBP	6.99	□□□□□ -1.29
FRA1	YLL029W	YDR029W	Q12111	104 aa		6.99	□□□□□ -1.29
FRA1	YLL029W	MDM10	P18409	493 aa		6.98	□□□□□ -1.29
FRA1	YLL029W	ATS1	P31386	333 aa		6.98	□□□□□ -1.29
FRA1	YLL029W	GLC7	P32598	312 aa	Known RBP	6.98	□□□□□ -1.29
FRA1	YLL029W	PET191	Q02772	108 aa		6.98	□□□□□ -1.29
FRA1	YLL029W	PAU23	Q07987	124 aa		6.98	□□□□□ -1.29
FRA1	YLL029W	IES4	Q08561	116 aa		6.98	□□□□□ -1.29
FRA1	YLL029W	TIR4	Q12218	487 aa	Predicted RBP	6.98	□□□□□ -1.29
FRA1	YLL029W	SME1	Q12330	94 aa	Predicted RBP	6.98	□□□□□ -1.29
FRA1	YLL029W	PAU17	Q12370	124 aa		6.98	□□□□□ -1.29
FRA1	YLL029W	ZRT1	P32804	376 aa		6.98	□□□□□ -1.29
FRA1	YLL029W	VMA11	P32842	164 aa		6.98	□□□□□ -1.29
FRA1	YLL029W	GPX2	P38143	162 aa		6.98	□□□□□ -1.29
FRA1	YLL029W	YBL081W	P38180	368 aa	Known RBP	6.98	□□□□□ -1.29
FRA1	YLL029W	MST28	P39552	234 aa		6.98	□□□□□ -1.29
FRA1	YLL029W	NMA2	P53204	395 aa		6.98	□□□□□ -1.29
FRA1	YLL029W	GAS3	Q03655	524 aa		6.98	□□□□□ -1.29
FRA1	YLL029W	SHH4	Q06236	168 aa		6.98	□□□□□ -1.29
FRA1	YLL029W	CPA1	P07258	411 aa	Known RBP	6.97	□□□□□ -1.29
FRA1	YLL029W	CDC43	P18898	376 aa		6.97	□□□□□ -1.29
FRA1	YLL029W	PRO1	P32264	428 aa		6.97	□□□□□ -1.29
FRA1	YLL029W	ERG26	P53199	349 aa	Known RBP	6.97	□□□□□ -1.29
FRA1	YLL029W	KEI1	Q06346	221 aa		6.97	□□□□□ -1.29
FRA1	YLL029W	PIN3	Q06449	215 aa		6.97	□□□□□ -1.29
FRA1	YLL029W	FIT3	Q08907	204 aa		6.97	□□□□□ -1.29
FRA1	YLL029W	RPS25B	P0C0T4	108 aa	Known RBP	6.97	□□□□□ -1.29
FRA1	YLL029W	RPL30	P14120	105 aa	Known RBP	6.97	□□□□□ -1.29
FRA1	YLL029W	YHR140W	P38842	239 aa		6.97	□□□□□ -1.29
FRA1	YLL029W	ATG27	P46989	271 aa		6.97	□□□□□ -1.29
FRA1	YLL029W	GEP7	P53171	287 aa		6.97	□□□□□ -1.29
FRA1	YLL029W	RPS25A	Q3E792	108 aa	Predicted RBP	6.97	□□□□□ -1.29
FRA1	YLL029W	YPL229W	Q99395	206 aa		6.97	□□□□□ -1.29
FRA1	YLL029W	ACB1	P31787	87 aa		6.96	□□□□□ -1.3
FRA1	YLL029W	ISC1	P40015	477 aa	Known RBP	6.96	□□□□□ -1.3
FRA1	YLL029W	YIL165C	P40446	119 aa		6.96	□□□□□ -1.3
FRA1	YLL029W	CAT5	P41735	233 aa		6.96	□□□□□ -1.3
FRA1	YLL029W	CWP2	P43497	92 aa		6.96	□□□□□ -1.3
FRA1	YLL029W	SCW4	P53334	386 aa	Known RBP	6.96	□□□□□ -1.3
FRA1	YLL029W	YNL033W	P53964	284 aa		6.96	□□□□□ -1.3
FRA1	YLL029W	YNL019C	P53975	284 aa		6.96	□□□□□ -1.3
FRA1	YLL029W	MCA1	Q08601	432 aa		6.96	□□□□□ -1.3
FRA1	YLL029W	YPL162C	Q12042	273 aa		6.96	□□□□□ -1.3
FRA1	YLL029W	YDL009C	Q12210	107 aa		6.96	□□□□□ -1.3
FRA1	YLL029W	YOR097C	Q12274	175 aa	Predicted RBP	6.96	□□□□□ -1.3
FRA1	YLL029W	ATG12	P38316	186 aa		6.96	□□□□□ -1.3
FRA1	YLL029W	CUP9	P41817	306 aa		6.96	□□□□□ -1.3
FRA1	YLL029W	AIM25	P47140	327 aa		6.96	□□□□□ -1.3
FRA1	YLL029W	YPR174C	Q06616	221 aa	Predicted RBP	6.96	□□□□□ -1.3
FRA1	YLL029W	NNK1	P36003	928 aa		6.95	□□□□□ -1.3
FRA1	YLL029W	YBR063C	P38083	404 aa		6.95	□□□□□ -1.3
FRA1	YLL029W	ARC40	P38328	384 aa	Known RBP	6.95	□□□□□ -1.3
FRA1	YLL029W	YPL062W	Q02781	134 aa		6.95	□□□□□ -1.3
FRA1	YLL029W	YPL039W	Q03080	316 aa		6.95	□□□□□ -1.3
FRA1	YLL029W	YKL102C	P34249	101 aa		6.94	□□□□□ -1.3
FRA1	YLL029W	RPL14A	P36105	138 aa	Known RBP	6.94	□□□□□ -1.3
FRA1	YLL029W	YAR029W	P39549	74 aa		6.94	□□□□□ -1.3
FRA1	YLL029W	MRPS16	Q02608	121 aa		6.94	□□□□□ -1.3
FRA1	YLL029W	MED11	Q99278	115 aa		6.94	□□□□□ -1.3
FRA1	YLL029W	ECM29	P38737	1868 aa		6.94	□□□□□ -1.3
FRA1	YLL029W	MRS3	P10566	314 aa		6.94	□□□□□ -1.3
FRA1	YLL029W	MCR1	P36060	302 aa	Known RBP	6.94	□□□□□ -1.3
FRA1	YLL029W	POP8	P38208	133 aa		6.94	□□□□□ -1.3
FRA1	YLL029W	FLX1	P40464	311 aa		6.94	□□□□□ -1.3
FRA1	YLL029W	BXI1	P48558	297 aa		6.94	□□□□□ -1.3
FRA1	YLL029W	NUP100	Q02629	959 aa		6.94	□□□□□ -1.3
FRA1	YLL029W	YDR344C	Q05510	147 aa		6.94	□□□□□ -1.3
FRA1	YLL029W	YPR064W	Q12492	139 aa		6.94	□□□□□ -1.3
FRA1	YLL029W	RIF1	P29539	1916 aa		6.94	□□□□□ -1.3
FRA1	YLL029W	RAS2	P01120	322 aa	Known RBP	6.93	□□□□□ -1.3
FRA1	YLL029W	SCW11	P53189	542 aa		6.93	□□□□□ -1.3
FRA1	YLL029W	TEL1	P38110	2787 aa		6.93	□□□□□ -1.3
FRA1	YLL029W	CUP1-1	P0CX80	61 aa		6.93	□□□□□ -1.3
FRA1	YLL029W	CUP1-2	P0CX81	61 aa		6.93	□□□□□ -1.3

Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms