RNA–Protein interactions for RNA: YJR029W

YJR029W, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YJR029W, Length 5,268 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YJR029W	YJR029W	TDH1	P00360	332 aa	Known RBP	0.88	□□□□□ -2.27
YJR029W	YJR029W	AQY1	P0CD91	305 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	UBC5	P15732	148 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	CDC43	P18898	376 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	PHO80	P20052	293 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	SAG1	P20840	650 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	EXG1	P23776	448 aa	Known RBP	0.88	□□□□□ -2.27
YJR029W	YJR029W	IMG1	P25626	169 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	RPS14B	P39516	138 aa	Known RBP	0.88	□□□□□ -2.27
YJR029W	YJR029W	YER187W	P40102	141 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	ERG10	P41338	398 aa	Known RBP	0.88	□□□□□ -2.27
YJR029W	YJR029W	PCP1	P53259	346 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	YGR164W	P53291	111 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	SNZ1	Q03148	297 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	UPS3	Q04006	179 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	SDH7	Q04401	133 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	DPP1	Q05521	289 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	YPR114W	Q06107	315 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	YML054C-A	Q3E809	52 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	YAL064W-B	O13512	126 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	AST1	P35183	429 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	SHB17	P36136	271 aa	Known RBP	0.88	□□□□□ -2.27
YJR029W	YJR029W	ERV15	P38312	142 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	SSN3	P39073	555 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	SMX2	P40204	77 aa	Known RBP	0.88	□□□□□ -2.27
YJR029W	YJR029W	OST2	P46964	130 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	NBP35	P52920	328 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	MIG2	P53035	382 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	YCL001W-A	P87012	153 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	SMD1	Q02260	146 aa	Predicted RBP	0.88	□□□□□ -2.27
YJR029W	YJR029W	YPL107W	Q02873	248 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	YHM2	Q04013	314 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	YMR244W	Q04018	355 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	IRC21	Q04772	201 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	YOL014W	Q08110	124 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	HRT1	Q08273	121 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	YOR105W	Q08504	108 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	PSF3	Q12146	194 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	0.88	□□□□□ -2.27	not detected
YJR029W	YJR029W	YDR119W-A	Q2V2P9	66 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	YLR278C	Q05854	1341 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	PSK1	P31374	1356 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	FUR1	P18562	216 aa	Known RBP	0.88	□□□□□ -2.27
YJR029W	YJR029W	TRX3	P25372	127 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	BOS1	P25385	244 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	SGE1	P33335	543 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	YBR285W	P38354	144 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	COA1	P40452	197 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	YFH7	P43591	353 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	ERG26	P53199	349 aa	Known RBP	0.88	□□□□□ -2.27
YJR029W	YJR029W	YGR039W	P53225	103 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	SHR3	Q02774	210 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	YMR074C	Q04773	145 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	CSI2	Q08054	341 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	IRA1	P18963	3092 aa		0.88	□□□□□ -2.27
YJR029W	YJR029W	TIM17	P39515	158 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	PRM9	P39551	298 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	MST28	P39552	234 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	GCV3	P39726	170 aa	Predicted RBP	0.87	□□□□□ -2.27
YJR029W	YJR029W	YIL067C	P40514	678 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	YGL101W	P53144	215 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	YGR168C	P53293	376 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	YOL024W	Q08172	172 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	SDH6	Q3E785	79 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	KSH1	Q8TGJ3	72 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	RPL6B	P05739	176 aa	Known RBP	0.87	□□□□□ -2.27
YJR029W	YJR029W	URA5	P13298	226 aa	Known RBP	0.87	□□□□□ -2.27
YJR029W	YJR029W	YCR102C	P25608	368 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	SRP21	P32342	167 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	RIB7	P33312	244 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	SMP1	P38128	452 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	RPS20	P38701	121 aa	Known RBP	0.87	□□□□□ -2.27
YJR029W	YJR029W	YIL012W	P40551	113 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	MIC27	P50945	234 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	MPC3	P53311	146 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	ABZ2	Q03266	374 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	BET5	Q03630	159 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	INP1	Q03694	420 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	HPF1	Q05164	967 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	ISA1	Q07821	250 aa	Predicted RBP	0.87	□□□□□ -2.27
YJR029W	YJR029W	GRE1	Q08969	168 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	YLR053C	Q12026	108 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	YLR050C	Q12155	161 aa	Known RBP	0.87	□□□□□ -2.27
YJR029W	YJR029W	YPR063C	Q12160	140 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	Q0142	Q9ZZW4	58 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	YER145C-A	A0A023PYF4	145 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	YPR096C	O13587	100 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	FBA1	P14540	359 aa	Known RBP	0.87	□□□□□ -2.27
YJR029W	YJR029W	GCN3	P14741	305 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	SUA5	P32579	426 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	SFT2	P38166	215 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	MBA1	P38300	278 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	YER184C	P39961	794 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	MUP1	P50276	574 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	ARO8	P53090	500 aa	Known RBP	0.87	□□□□□ -2.27
YJR029W	YJR029W	CSF1	Q12150	2958 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	HOS1	Q12214	470 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	OCA6	Q12454	224 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	YKL018C-A	Q3E7A7	99 aa		0.87	□□□□□ -2.27
YJR029W	YJR029W	TFB5	Q3E7C1	72 aa	Predicted RBP	0.87	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 89.3 ms