RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W EDC3P39998 551 aaKnown RBP1.17□□□□□ -2.22
RPL40AYIL148W RIO2P40160 425 aaKnown RBP1.17□□□□□ -2.22
RPL40AYIL148W YIP3P53633 176 aa1.17□□□□□ -2.22
RPL40AYIL148W YNL033WP53964 284 aa1.17□□□□□ -2.22
RPL40AYIL148W TMA20P89886 181 aaPredicted RBP1.17□□□□□ -2.22
RPL40AYIL148W PIR1Q03178 341 aa1.17□□□□□ -2.22
RPL40AYIL148W YLR050CQ12155 161 aaKnown RBP1.17□□□□□ -2.22
RPL40AYIL148W YNL146C-AQ3E7Z1 64 aa1.17□□□□□ -2.22
RPL40AYIL148W MSB2P32334 1306 aa1.16□□□□□ -2.22
RPL40AYIL148W RAD51P25454 400 aa1.16□□□□□ -2.22
RPL40AYIL148W HSP30P25619 332 aa1.16□□□□□ -2.22
RPL40AYIL148W YKR041WP36134 250 aa1.16□□□□□ -2.22
RPL40AYIL148W XPT1P47165 209 aa1.16□□□□□ -2.22
RPL40AYIL148W MAK3Q03503 176 aa1.16□□□□□ -2.22
RPL40AYIL148W NAT3Q06504 195 aa1.16□□□□□ -2.22
RPL40AYIL148W YOR214CQ12282 236 aa1.16□□□□□ -2.22
RPL40AYIL148W DGK1Q12382 290 aa1.16□□□□□ -2.22
RPL40AYIL148W FAS1P07149 2051 aaKnown RBP1.16□□□□□ -2.22
RPL40AYIL148W COX8P04039 78 aa1.15□□□□□ -2.23
RPL40AYIL148W FMP23P38231 175 aa1.15□□□□□ -2.23
RPL40AYIL148W VMA22P38784 181 aa1.15□□□□□ -2.23
RPL40AYIL148W GLR1P41921 483 aaKnown RBP1.15□□□□□ -2.23
RPL40AYIL148W MPA43P53583 542 aaPredicted RBP1.15□□□□□ -2.23
RPL40AYIL148W DAD4P69851 72 aa1.15□□□□□ -2.23
RPL40AYIL148W YDR476CQ03362 224 aa1.15□□□□□ -2.23
RPL40AYIL148W UPS3Q04006 179 aa1.15□□□□□ -2.23
RPL40AYIL148W HRD1Q08109 551 aa1.15□□□□□ -2.23
RPL40AYIL148W YOR015WQ12169 119 aa1.15□□□□□ -2.23
RPL40AYIL148W RAD6P06104 172 aa1.14□□□□□ -2.23
RPL40AYIL148W QCR2P07257 368 aa1.14□□□□□ -2.23
RPL40AYIL148W RPL35AP0CX84 120 aaKnown RBP1.14□□□□□ -2.23
RPL40AYIL148W RPL35BP0CX85 120 aaKnown RBP1.14□□□□□ -2.23
RPL40AYIL148W YCR023CP25351 611 aa1.14□□□□□ -2.23
RPL40AYIL148W CLG1P35190 452 aa1.14□□□□□ -2.23
RPL40AYIL148W MAK5P38112 773 aaPredicted RBP1.14□□□□□ -2.23
RPL40AYIL148W YHL018WP38744 120 aaPredicted RBP1.14□□□□□ -2.23
RPL40AYIL148W FLX1P40464 311 aa1.14□□□□□ -2.23
RPL40AYIL148W HYR1P40581 163 aaKnown RBP1.14□□□□□ -2.23
RPL40AYIL148W ALB1P47019 175 aaPredicted RBP1.14□□□□□ -2.23
RPL40AYIL148W SBH2P52871 88 aa1.14□□□□□ -2.23
RPL40AYIL148W HHT1P61830 136 aa1.14□□□□□ -2.23
RPL40AYIL148W UBC7Q02159 165 aa1.14□□□□□ -2.23
RPL40AYIL148W YKR005CQ02203 525 aa1.14□□□□□ -2.23
RPL40AYIL148W CWC27Q02770 301 aa1.14□□□□□ -2.23
RPL40AYIL148W YPR127WQ06494 345 aa1.14□□□□□ -2.23
RPL40AYIL148W TRM3Q07527 1436 aa1.14□□□□□ -2.23
RPL40AYIL148W UBC6P33296 250 aaPredicted RBP1.13□□□□□ -2.23
RPL40AYIL148W SOK1P40317 901 aa1.13□□□□□ -2.23
RPL40AYIL148W TTI2P47168 421 aa1.13□□□□□ -2.23
RPL40AYIL148W GAL83Q04739 417 aa1.13□□□□□ -2.23
RPL40AYIL148W FYV12Q08559 129 aa1.13□□□□□ -2.23
RPL40AYIL148W DAS2Q12084 232 aa1.13□□□□□ -2.23
RPL40AYIL148W ATP20Q12233 115 aa1.13□□□□□ -2.23
RPL40AYIL148W STF2P16965 84 aa1.12□□□□□ -2.23
RPL40AYIL148W PHO85P17157 305 aa1.12□□□□□ -2.23
RPL40AYIL148W NUF2P33895 451 aa1.12□□□□□ -2.23
RPL40AYIL148W RPB7P34087 171 aa1.12□□□□□ -2.23
RPL40AYIL148W RRT1P38192 103 aa1.12□□□□□ -2.23
RPL40AYIL148W YAE1P47118 141 aaPredicted RBP1.12□□□□□ -2.23
RPL40AYIL148W THG1P53215 237 aaKnown RBP1.12□□□□□ -2.23
RPL40AYIL148W YNL140CP53910 189 aa1.12□□□□□ -2.23
RPL40AYIL148W MET31Q03081 177 aa1.12□□□□□ -2.23
RPL40AYIL148W RRP17Q04031 235 aaPredicted RBP1.12□□□□□ -2.23
RPL40AYIL148W RNH202Q05635 350 aa1.12□□□□□ -2.23
RPL40AYIL148W FIT2Q08906 153 aa1.12□□□□□ -2.23
RPL40AYIL148W ACC1Q00955 2233 aaKnown RBP1.11□□□□□ -2.23
RPL40AYIL148W RPS28BP0C0X0 67 aaKnown RBP1.11□□□□□ -2.23
RPL40AYIL148W YHL042WP38729 150 aa1.11□□□□□ -2.23
RPL40AYIL148W HPA3P39979 161 aa1.11□□□□□ -2.23
RPL40AYIL148W MOB1P40484 314 aa1.11□□□□□ -2.23
RPL40AYIL148W YFH7P43591 353 aa1.11□□□□□ -2.23
RPL40AYIL148W YLR053CQ12026 108 aa1.11□□□□□ -2.23
RPL40AYIL148W RPS28AQ3E7X9 67 aaPredicted RBP1.11□□□□□ -2.23
RPL40AYIL148W FES1P38260 290 aa1.1□□□□□ -2.23
RPL40AYIL148W AME1P38313 324 aa1.1□□□□□ -2.23
RPL40AYIL148W DML1Q03652 475 aa1.1□□□□□ -2.23
RPL40AYIL148W YDR391CQ04170 232 aa1.1□□□□□ -2.23
RPL40AYIL148W ATG41Q12048 136 aa1.1□□□□□ -2.23
RPL40AYIL148W YMR030W-AQ3E760 96 aa1.1□□□□□ -2.23
RPL40AYIL148W YLR422WQ06409 1932 aa1.1□□□□□ -2.23
RPL40AYIL148W ARC19P33204 171 aaKnown RBP1.09□□□□□ -2.23
RPL40AYIL148W YRA2P36036 203 aaKnown RBP RIP-Chip data1.09□□□□□ -2.23not detected
RPL40AYIL148W YGL235WP53071 178 aa1.09□□□□□ -2.23
RPL40AYIL148W YML079WQ03629 201 aa1.09□□□□□ -2.23
RPL40AYIL148W THI74Q04083 370 aa1.09□□□□□ -2.23
RPL40AYIL148W SYM1Q06563 197 aa1.09□□□□□ -2.23
RPL40AYIL148W UIP4Q08926 304 aa1.09□□□□□ -2.23
RPL40AYIL148W YLR046CQ12253 270 aa1.09□□□□□ -2.23
RPL40AYIL148W VAR1P02381 398 aa1.08□□□□□ -2.24
RPL40AYIL148W PBI2P0CT04 75 aaKnown RBP1.08□□□□□ -2.24
RPL40AYIL148W SEN2P16658 377 aa1.08□□□□□ -2.24
RPL40AYIL148W BUB2P26448 306 aaPredicted RBP1.08□□□□□ -2.24
RPL40AYIL148W PTC1P35182 281 aa1.08□□□□□ -2.24
RPL40AYIL148W YER121WP40076 114 aa1.08□□□□□ -2.24
RPL40AYIL148W YGL101WP53144 215 aa1.08□□□□□ -2.24
RPL40AYIL148W EFM5P53200 248 aaKnown RBP1.08□□□□□ -2.24
RPL40AYIL148W YMR007WQ03675 126 aa1.08□□□□□ -2.24
RPL40AYIL148W YHP1Q04116 353 aa1.08□□□□□ -2.24
RPL40AYIL148W UPS1Q05776 175 aa1.08□□□□□ -2.24
RPL40AYIL148W YDL157CQ12082 118 aa1.08□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 89.7 ms