RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W FEN2P25621 512 aaKnown RBP11.27□□□□□ -0.61
RPN10YHR200W YKL075CP36083 450 aa11.27□□□□□ -0.61
RPN10YHR200W FLO5P38894 1075 aa11.27□□□□□ -0.61
RPN10YHR200W SAS2P40963 338 aa11.27□□□□□ -0.61
RPN10YHR200W YNL234WP53857 426 aa11.27□□□□□ -0.61
RPN10YHR200W RPL15BP54780 204 aaPredicted RBP11.27□□□□□ -0.61
RPN10YHR200W ARR3Q06598 404 aa11.27□□□□□ -0.61
RPN10YHR200W USV1Q12132 391 aa11.27□□□□□ -0.61
RPN10YHR200W PCC1Q3E833 88 aa11.27□□□□□ -0.61
RPN10YHR200W DAL3P32459 195 aa11.26□□□□□ -0.61
RPN10YHR200W ALK2P32789 676 aaPredicted RBP11.26□□□□□ -0.61
RPN10YHR200W QDR3P38227 689 aa11.26□□□□□ -0.61
RPN10YHR200W YPT31P38555 223 aaKnown RBP11.26□□□□□ -0.61
RPN10YHR200W YIL024CP40543 189 aa11.26□□□□□ -0.61
RPN10YHR200W RTS2P40962 232 aa11.26□□□□□ -0.61
RPN10YHR200W SHH3Q04487 196 aa11.26□□□□□ -0.61
RPN10YHR200W CTR3Q06686 241 aa11.26□□□□□ -0.61
RPN10YHR200W Q0142Q9ZZW4 58 aa11.26□□□□□ -0.61
RPN10YHR200W PAU1P0CE88 120 aa11.25□□□□□ -0.61
RPN10YHR200W PAU14P0CE89 120 aa11.25□□□□□ -0.61
RPN10YHR200W PAU6P0CE90 120 aa11.25□□□□□ -0.61
RPN10YHR200W PAU18P0CE91 120 aa11.25□□□□□ -0.61
RPN10YHR200W PAU8P0CE92 120 aa11.25□□□□□ -0.61
RPN10YHR200W PAU11P0CE93 120 aa11.25□□□□□ -0.61
RPN10YHR200W SEC59P20048 519 aa11.25□□□□□ -0.61
RPN10YHR200W CNB1P25296 175 aa11.25□□□□□ -0.61
RPN10YHR200W RPB9P27999 122 aa11.25□□□□□ -0.61
RPN10YHR200W PAU13P38725 120 aa11.25□□□□□ -0.61
RPN10YHR200W PTC7P38797 343 aa11.25□□□□□ -0.61
RPN10YHR200W PAU10Q03050 120 aa11.25□□□□□ -0.61
RPN10YHR200W YMR007WQ03675 126 aa11.25□□□□□ -0.61
RPN10YHR200W YML108WQ03759 105 aa11.25□□□□□ -0.61
RPN10YHR200W ATC1Q04005 294 aa11.25□□□□□ -0.61
RPN10YHR200W MCH1Q07376 486 aa11.25□□□□□ -0.61
RPN10YHR200W PAU20Q08322 120 aa11.25□□□□□ -0.61
RPN10YHR200W FCY1Q12178 158 aa11.25□□□□□ -0.61
RPN10YHR200W POM34Q12445 299 aa11.25□□□□□ -0.61
RPN10YHR200W PAU9Q3E770 120 aa11.25□□□□□ -0.61
RPN10YHR200W BPH1P25356 2167 aa11.24□□□□□ -0.61
RPN10YHR200W PIS1P06197 220 aaKnown RBP11.24□□□□□ -0.61
RPN10YHR200W MIA40P36046 403 aa11.24□□□□□ -0.61
RPN10YHR200W DER1P38307 211 aa11.24□□□□□ -0.61
RPN10YHR200W YAR068WP39564 161 aa11.24□□□□□ -0.61
RPN10YHR200W SDH7Q04401 133 aa11.24□□□□□ -0.61
RPN10YHR200W AVO2Q04749 426 aa11.24□□□□□ -0.61
RPN10YHR200W TMA10Q06177 86 aa11.24□□□□□ -0.61
RPN10YHR200W DOG2P38773 246 aa11.23□□□□□ -0.61
RPN10YHR200W DOG1P38774 246 aa11.23□□□□□ -0.61
RPN10YHR200W YPL108WQ02872 168 aaPredicted RBP11.23□□□□□ -0.61
RPN10YHR200W YHP1Q04116 353 aa11.23□□□□□ -0.61
RPN10YHR200W POS5Q06892 414 aa11.23□□□□□ -0.61
RPN10YHR200W YER145C-AA0A023PYF4 145 aa11.22□□□□□ -0.61
RPN10YHR200W SOD1P00445 154 aaKnown RBP11.22□□□□□ -0.61
RPN10YHR200W RPL14AP36105 138 aaKnown RBP11.22□□□□□ -0.61
RPN10YHR200W YKR045CP36138 183 aa11.22□□□□□ -0.61
RPN10YHR200W RRT1P38192 103 aa11.22□□□□□ -0.61
RPN10YHR200W CDS1P38221 457 aa11.22□□□□□ -0.61
RPN10YHR200W RPL14BP38754 138 aaKnown RBP11.22□□□□□ -0.61
RPN10YHR200W PIC2P40035 300 aa11.22□□□□□ -0.61
RPN10YHR200W YER188WP40103 239 aa11.21□□□□□ -0.61
RPN10YHR200W DFR1P07807 211 aaKnown RBP RIP-Chip data11.2□□□□□ -0.62not detected
RPN10YHR200W AVT5P38176 459 aa11.2□□□□□ -0.62
RPN10YHR200W BDH1P39714 382 aa11.2□□□□□ -0.62
RPN10YHR200W TAX4P47030 604 aa11.2□□□□□ -0.62
RPN10YHR200W ZEO1Q08245 113 aa11.2□□□□□ -0.62
RPN10YHR200W MRPL38P35996 138 aaPredicted RBP11.19□□□□□ -0.62
RPN10YHR200W MRPL4P36517 319 aa11.19□□□□□ -0.62
RPN10YHR200W CSH1P38287 376 aa11.19□□□□□ -0.62
RPN10YHR200W YJL213WP40896 331 aa11.19□□□□□ -0.62
RPN10YHR200W LST7P53237 242 aa11.19□□□□□ -0.62
RPN10YHR200W YMR253CQ04835 414 aa11.19□□□□□ -0.62
RPN10YHR200W SRL1Q08673 210 aa11.19□□□□□ -0.62
RPN10YHR200W YMR166CQ03829 368 aa11.18□□□□□ -0.62
RPN10YHR200W TY1A-DR3Q12441 440 aa11.18□□□□□ -0.62
RPN10YHR200W YMR316C-AI2HB70 103 aa11.17□□□□□ -0.62
RPN10YHR200W PRS4P38063 326 aaPredicted RBP11.17□□□□□ -0.62
RPN10YHR200W TIF11P38912 153 aaKnown RBP11.17□□□□□ -0.62
RPN10YHR200W GPP2P40106 250 aaKnown RBP11.17□□□□□ -0.62
RPN10YHR200W PGD1P40356 397 aa11.17□□□□□ -0.62
RPN10YHR200W YNR071CP53757 342 aa11.17□□□□□ -0.62
RPN10YHR200W HSP12P22943 109 aaKnown RBP11.16□□□□□ -0.62
RPN10YHR200W PHS1P40857 217 aa11.16□□□□□ -0.62
RPN10YHR200W YGR018CP53211 109 aa11.16□□□□□ -0.62
RPN10YHR200W TIM21P53220 239 aa11.16□□□□□ -0.62
RPN10YHR200W SNO1Q03144 224 aa11.16□□□□□ -0.62
RPN10YHR200W CDC7P06243 507 aa11.15□□□□□ -0.62
RPN10YHR200W ADH3P07246 375 aaKnown RBP11.15□□□□□ -0.62
RPN10YHR200W RPS22AP0C0W1 130 aaKnown RBP11.15□□□□□ -0.62
RPN10YHR200W YCR022CP25620 114 aa11.15□□□□□ -0.62
RPN10YHR200W LAC1P28496 418 aa11.15□□□□□ -0.62
RPN10YHR200W HMX1P32339 317 aa11.15□□□□□ -0.62
RPN10YHR200W TRS20P38334 175 aa11.15□□□□□ -0.62
RPN10YHR200W LOC1P43586 204 aaPredicted RBP11.15□□□□□ -0.62
RPN10YHR200W TIM11P81449 96 aaPredicted RBP11.15□□□□□ -0.62
RPN10YHR200W LRS4Q04087 347 aaKnown RBP11.15□□□□□ -0.62
RPN10YHR200W RPS2P25443 254 aaKnown RBP11.14□□□□□ -0.63
RPN10YHR200W PET100P38958 111 aa11.14□□□□□ -0.63
RPN10YHR200W HHO1P53551 258 aa11.14□□□□□ -0.63
RPN10YHR200W AFR1P33304 620 aa11.13□□□□□ -0.63
RPN10YHR200W ATG27P46989 271 aa11.13□□□□□ -0.63
Retrieved 100 of 5,963 RNA–protein pairs in 65 ms