RNA–Protein interactions for RNA: YHR153C

SPO16, Transcript of Meiosis-specific protein involved in synaptonemal complex assembly, yeastyeast

Gene SPO16, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO16YHR153C LSM7P53905 115 aaKnown RBP2.59□□□□□ -1.99
SPO16YHR153C MRPS17Q03246 237 aaPredicted RBP2.59□□□□□ -1.99
SPO16YHR153C MDM32Q12171 622 aa2.59□□□□□ -1.99
SPO16YHR153C DYN1P36022 4092 aa2.58□□□□□ -2
SPO16YHR153C CDC36P06100 191 aaPredicted RBP2.58□□□□□ -2
SPO16YHR153C RFA3P26755 122 aaKnown RBP2.58□□□□□ -2
SPO16YHR153C PTM1P32857 523 aa2.58□□□□□ -2
SPO16YHR153C GAA1P39012 614 aa2.58□□□□□ -2
SPO16YHR153C YPL162CQ12042 273 aa2.58□□□□□ -2
SPO16YHR153C MCP1Q12106 302 aa2.58□□□□□ -2
SPO16YHR153C ADF1Q2V2Q1 113 aa2.58□□□□□ -2
SPO16YHR153C JIP3O13555 125 aa2.57□□□□□ -2
SPO16YHR153C HTB1P02293 131 aaKnown RBP2.57□□□□□ -2
SPO16YHR153C HTB2P02294 131 aa2.57□□□□□ -2
SPO16YHR153C BET1P22804 142 aa2.57□□□□□ -2
SPO16YHR153C LSM4P40070 187 aaKnown RBP2.57□□□□□ -2
SPO16YHR153C YDR249CQ03787 373 aa2.57□□□□□ -2
SPO16YHR153C SML1Q04964 104 aa2.57□□□□□ -2
SPO16YHR153C YRA1Q12159 226 aaKnown RBP2.57□□□□□ -2
SPO16YHR153C TIM9O74700 87 aa2.56□□□□□ -2
SPO16YHR153C UTP30P36144 274 aaKnown RBP2.56□□□□□ -2
SPO16YHR153C YER135CP40082 130 aa2.56□□□□□ -2
SPO16YHR153C GVP36P40531 326 aaKnown RBP2.56□□□□□ -2
SPO16YHR153C COG5P53951 403 aa2.56□□□□□ -2
SPO16YHR153C GET4Q12125 312 aa2.56□□□□□ -2
SPO16YHR153C MER1P16523 270 aa2.55□□□□□ -2
SPO16YHR153C SPS18P32572 300 aa2.55□□□□□ -2
SPO16YHR153C FZF1P32805 299 aa2.55□□□□□ -2
SPO16YHR153C FSF1Q12029 327 aaKnown RBP2.55□□□□□ -2
SPO16YHR153C SHE2P36068 246 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
SPO16YHR153C YBR285WP38354 144 aa2.54□□□□□ -2
SPO16YHR153C YRB2P40517 327 aa2.54□□□□□ -2
SPO16YHR153C GET1P53192 235 aa2.54□□□□□ -2
SPO16YHR153C YHR214C-EQ8TGK0 99 aa2.54□□□□□ -2
SPO16YHR153C MDN1Q12019 4910 aaKnown RBP2.53□□□□□ -2
SPO16YHR153C RPB3P16370 318 aaKnown RBP2.53□□□□□ -2
SPO16YHR153C PET191Q02772 108 aa2.53□□□□□ -2
SPO16YHR153C ABP140Q08641 628 aaKnown RBP2.53□□□□□ -2
SPO16YHR153C CKS1P20486 150 aaKnown RBP2.52□□□□□ -2.01
SPO16YHR153C SAY1P53324 424 aa2.52□□□□□ -2.01
SPO16YHR153C GRX3Q03835 250 aa2.52□□□□□ -2.01
SPO16YHR153C FUS2Q05670 677 aa2.52□□□□□ -2.01
SPO16YHR153C YNG1Q08465 219 aa2.52□□□□□ -2.01
SPO16YHR153C MATALPHA2P0CY08 210 aa2.51□□□□□ -2.01
SPO16YHR153C HMLALPHA2P0CY09 210 aa2.51□□□□□ -2.01
SPO16YHR153C CBF1P17106 351 aa2.51□□□□□ -2.01
SPO16YHR153C TFC1P32367 649 aa2.51□□□□□ -2.01
SPO16YHR153C TMA19P35691 167 aaKnown RBP2.51□□□□□ -2.01
SPO16YHR153C YBR209WP38311 105 aa2.51□□□□□ -2.01
SPO16YHR153C YOL162WP0CF19 215 aa2.5□□□□□ -2.01
SPO16YHR153C YBR219CP38317 127 aa2.5□□□□□ -2.01
SPO16YHR153C YNR077CP53758 84 aa2.5□□□□□ -2.01
SPO16YHR153C YFR032C-BQ8TGU2 87 aa2.5□□□□□ -2.01
SPO16YHR153C ATG40Q99325 256 aa2.5□□□□□ -2.01
SPO16YHR153C OPY1P38271 328 aa2.49□□□□□ -2.01
SPO16YHR153C MMS2P53152 137 aa2.49□□□□□ -2.01
SPO16YHR153C MZM1Q03429 123 aaPredicted RBP2.49□□□□□ -2.01
SPO16YHR153C ANT1Q06497 328 aa2.49□□□□□ -2.01
SPO16YHR153C YGL010WP25338 174 aa2.48□□□□□ -2.01
SPO16YHR153C AIM25P47140 327 aa2.48□□□□□ -2.01
SPO16YHR153C HNT1Q04344 158 aaKnown RBP2.48□□□□□ -2.01
SPO16YHR153C CDC39P25655 2108 aaKnown RBP2.48□□□□□ -2.01
SPO16YHR153C FLO9P39712 1322 aa2.47□□□□□ -2.01
SPO16YHR153C RPL27AP0C2H6 136 aaKnown RBP2.47□□□□□ -2.01
SPO16YHR153C ATP15P21306 62 aa2.47□□□□□ -2.01
SPO16YHR153C ASF2P32448 525 aaPredicted RBP2.47□□□□□ -2.01
SPO16YHR153C YDR274CP87283 123 aa2.47□□□□□ -2.01
SPO16YHR153C YLR162WQ06235 118 aa2.47□□□□□ -2.01
SPO16YHR153C GGA1Q06336 557 aa2.47□□□□□ -2.01
SPO16YHR153C ATG10Q07879 167 aa2.47□□□□□ -2.01
SPO16YHR153C YCL012CQ8J0M4 134 aa2.47□□□□□ -2.01
SPO16YHR153C ODC2Q99297 307 aa2.47□□□□□ -2.01
SPO16YHR153C QCR7P00128 127 aa2.46□□□□□ -2.02
SPO16YHR153C SIR2P06700 562 aa2.46□□□□□ -2.02
SPO16YHR153C CNB1P25296 175 aa2.46□□□□□ -2.02
SPO16YHR153C YKR045CP36138 183 aa2.46□□□□□ -2.02
SPO16YHR153C RPL13BP40212 199 aaKnown RBP2.46□□□□□ -2.02
SPO16YHR153C EMC4P53073 190 aa2.46□□□□□ -2.02
SPO16YHR153C RTC4P53850 401 aa2.46□□□□□ -2.02
SPO16YHR153C YOL160WQ08321 113 aa2.46□□□□□ -2.02
SPO16YHR153C YLR046CQ12253 270 aa2.46□□□□□ -2.02
SPO16YHR153C RPL13AQ12690 199 aaPredicted RBP2.46□□□□□ -2.02
SPO16YHR153C STT4P37297 1900 aa2.46□□□□□ -2.02
SPO16YHR153C YPK2P18961 677 aa2.45□□□□□ -2.02
SPO16YHR153C YCR090CP25654 182 aaKnown RBP2.45□□□□□ -2.02
SPO16YHR153C YBR220CP38318 560 aa2.45□□□□□ -2.02
SPO16YHR153C GLE2P40066 365 aa2.45□□□□□ -2.02
SPO16YHR153C NOP19P53317 196 aaPredicted RBP2.45□□□□□ -2.02
SPO16YHR153C MRS1P07266 363 aa2.44□□□□□ -2.02
SPO16YHR153C AIM2P39721 246 aa2.44□□□□□ -2.02
SPO16YHR153C PHB1P40961 287 aa2.44□□□□□ -2.02
SPO16YHR153C ERJ5P43613 295 aaPredicted RBP2.44□□□□□ -2.02
SPO16YHR153C POP3P53833 195 aaPredicted RBP2.44□□□□□ -2.02
SPO16YHR153C PIR1Q03178 341 aa2.44□□□□□ -2.02
SPO16YHR153C CUE4Q04201 117 aaPredicted RBP2.44□□□□□ -2.02
SPO16YHR153C NKP2Q06162 153 aa2.44□□□□□ -2.02
SPO16YHR153C CSI2Q08054 341 aa2.44□□□□□ -2.02
SPO16YHR153C YOR342CQ12182 319 aa2.44□□□□□ -2.02
SPO16YHR153C URA2P07259 2214 aaKnown RBP2.44□□□□□ -2.02
SPO16YHR153C YLR236CA0A023PZG4 107 aa2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms