RNA–Protein interactions for RNA: YGR063C

SPT4, Transcript of Component of the universally conserved Spt4/5 complex (DSIF complex), yeastyeast

Gene SPT4, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT4YGR063C SCW4P53334 386 aaKnown RBP3.04□□□□□ -1.92
SPT4YGR063C SKO1Q02100 647 aa3.04□□□□□ -1.92
SPT4YGR063C AIM34Q03673 198 aa3.04□□□□□ -1.92
SPT4YGR063C INP1Q03694 420 aa3.04□□□□□ -1.92
SPT4YGR063C YMR206WQ03695 313 aa3.04□□□□□ -1.92
SPT4YGR063C STP3Q05937 343 aa3.04□□□□□ -1.92
SPT4YGR063C LIP2Q06005 328 aa3.04□□□□□ -1.92
SPT4YGR063C DIC1Q06143 298 aa3.04□□□□□ -1.92
SPT4YGR063C YDL242WQ07746 117 aa3.04□□□□□ -1.92
SPT4YGR063C ATO3Q12359 275 aa3.04□□□□□ -1.92
SPT4YGR063C YAR066WP0CX18 203 aa3.03□□□□□ -1.92
SPT4YGR063C YHR214WP0CX19 203 aa3.03□□□□□ -1.92
SPT4YGR063C RPL1AP0CX43 217 aaKnown RBP3.03□□□□□ -1.92
SPT4YGR063C RPL1BP0CX44 217 aaKnown RBP3.03□□□□□ -1.92
SPT4YGR063C CUP2P15315 225 aa3.03□□□□□ -1.92
SPT4YGR063C FCY2P17064 533 aa3.03□□□□□ -1.92
SPT4YGR063C MCK1P21965 375 aaKnown RBP3.03□□□□□ -1.92
SPT4YGR063C SRP21P32342 167 aa3.03□□□□□ -1.92
SPT4YGR063C ISF1P32488 338 aa3.03□□□□□ -1.92
SPT4YGR063C RPB7P34087 171 aa3.03□□□□□ -1.92
SPT4YGR063C SWD2P36104 329 aaPredicted RBP3.03□□□□□ -1.92
SPT4YGR063C MOH1P38191 138 aa3.03□□□□□ -1.92
SPT4YGR063C VBA2P38358 474 aaKnown RBP3.03□□□□□ -1.92
SPT4YGR063C OST2P46964 130 aa3.03□□□□□ -1.92
SPT4YGR063C YGL118CP53132 145 aa3.03□□□□□ -1.92
SPT4YGR063C YNR040WP53736 256 aa3.03□□□□□ -1.92
SPT4YGR063C RPL21AQ02753 160 aaKnown RBP3.03□□□□□ -1.92
SPT4YGR063C NRG1Q03125 231 aa3.03□□□□□ -1.92
SPT4YGR063C MRPL1Q04599 285 aa3.03□□□□□ -1.92
SPT4YGR063C YOR105WQ08504 108 aa3.03□□□□□ -1.92
SPT4YGR063C DGA1Q08650 418 aa3.03□□□□□ -1.92
SPT4YGR063C DAP1Q12091 152 aa3.03□□□□□ -1.92
SPT4YGR063C PRP46Q12417 451 aaPredicted RBP3.03□□□□□ -1.92
SPT4YGR063C MRPL23Q12487 163 aaPredicted RBP3.03□□□□□ -1.92
SPT4YGR063C RPL21BQ12672 160 aaKnown RBP3.03□□□□□ -1.92
SPT4YGR063C RPS13P05756 151 aaKnown RBP3.02□□□□□ -1.93
SPT4YGR063C CDC21P06785 304 aa3.02□□□□□ -1.93
SPT4YGR063C YER039C-AP0CD97 72 aa3.02□□□□□ -1.93
SPT4YGR063C NFS1P25374 497 aa3.02□□□□□ -1.93
SPT4YGR063C ARO4P32449 370 aaKnown RBP3.02□□□□□ -1.93
SPT4YGR063C SHB17P36136 271 aaKnown RBP3.02□□□□□ -1.93
SPT4YGR063C ARC40P38328 384 aaKnown RBP3.02□□□□□ -1.93
SPT4YGR063C ECM14P38836 430 aa3.02□□□□□ -1.93
SPT4YGR063C SHR5P41912 237 aa3.02□□□□□ -1.93
SPT4YGR063C GZF3P42944 551 aaKnown RBP3.02□□□□□ -1.93
SPT4YGR063C YJR096WP47137 282 aa3.02□□□□□ -1.93
SPT4YGR063C ALG9P53868 555 aaKnown RBP3.02□□□□□ -1.93
SPT4YGR063C MRPL19P53875 158 aa3.02□□□□□ -1.93
SPT4YGR063C BUD25P85052 153 aa3.02□□□□□ -1.93
SPT4YGR063C BET5Q03630 159 aa3.02□□□□□ -1.93
SPT4YGR063C SPG3Q04398 127 aaPredicted RBP3.02□□□□□ -1.93
SPT4YGR063C YMR310CQ04867 317 aaPredicted RBP3.02□□□□□ -1.93
SPT4YGR063C YCR024C-BQ3E7Z8 88 aa3.02□□□□□ -1.93
SPT4YGR063C MSB2P32334 1306 aa3.01□□□□□ -1.93
SPT4YGR063C UBC5P15732 148 aa3.01□□□□□ -1.93
SPT4YGR063C QCR9P22289 66 aa3.01□□□□□ -1.93
SPT4YGR063C YCR100CP25606 316 aa3.01□□□□□ -1.93
SPT4YGR063C INO2P26798 304 aa3.01□□□□□ -1.93
SPT4YGR063C RPA12P32529 125 aaKnown RBP3.01□□□□□ -1.93
SPT4YGR063C TOA2P32774 122 aa3.01□□□□□ -1.93
SPT4YGR063C AGA2P32781 87 aa3.01□□□□□ -1.93
SPT4YGR063C SGE1P33335 543 aa3.01□□□□□ -1.93
SPT4YGR063C MIC12P38341 106 aa3.01□□□□□ -1.93
SPT4YGR063C ANS1P38832 159 aa3.01□□□□□ -1.93
SPT4YGR063C YAR068WP39564 161 aa3.01□□□□□ -1.93
SPT4YGR063C CYB5P40312 120 aa3.01□□□□□ -1.93
SPT4YGR063C BTT1P40314 149 aaPredicted RBP3.01□□□□□ -1.93
SPT4YGR063C BUD8P41698 603 aa3.01□□□□□ -1.93
SPT4YGR063C UBC9P50623 157 aaPredicted RBP3.01□□□□□ -1.93
SPT4YGR063C CRZ1P53968 678 aa3.01□□□□□ -1.93
SPT4YGR063C YMR178WQ03219 274 aaKnown RBP3.01□□□□□ -1.93
SPT4YGR063C VPS71Q03433 280 aa3.01□□□□□ -1.93
SPT4YGR063C RCR2Q03446 210 aaKnown RBP3.01□□□□□ -1.93
SPT4YGR063C YMR210WQ03649 449 aa3.01□□□□□ -1.93
SPT4YGR063C YMR090WQ04304 227 aaKnown RBP3.01□□□□□ -1.93
SPT4YGR063C SNT309Q06091 175 aaPredicted RBP3.01□□□□□ -1.93
SPT4YGR063C PAM18Q07914 168 aa3.01□□□□□ -1.93
SPT4YGR063C LDS2Q08218 356 aa3.01□□□□□ -1.93
SPT4YGR063C YPR011CQ12251 326 aa3.01□□□□□ -1.93
SPT4YGR063C JID1Q12350 301 aa3.01□□□□□ -1.93
SPT4YGR063C NPC2Q12408 173 aa3.01□□□□□ -1.93
SPT4YGR063C COA2Q3E823 68 aa3.01□□□□□ -1.93
SPT4YGR063C UBA3Q99344 299 aa3.01□□□□□ -1.93
SPT4YGR063C HMRA1P0CY11 126 aa3□□□□□ -1.93
SPT4YGR063C GAL2P13181 574 aa3□□□□□ -1.93
SPT4YGR063C MRPL20P22354 195 aaPredicted RBP3□□□□□ -1.93
SPT4YGR063C CPR2P23285 205 aa3□□□□□ -1.93
SPT4YGR063C YCR025CP25352 136 aa3□□□□□ -1.93
SPT4YGR063C AUR1P36107 401 aaPredicted RBP3□□□□□ -1.93
SPT4YGR063C YBR184WP38299 523 aa3□□□□□ -1.93
SPT4YGR063C YAL037WP39728 267 aa3□□□□□ -1.93
SPT4YGR063C YEL073CP39974 107 aa3□□□□□ -1.93
SPT4YGR063C OYE3P41816 400 aaPredicted RBP3□□□□□ -1.93
SPT4YGR063C ARP3P47117 449 aaKnown RBP3□□□□□ -1.93
SPT4YGR063C OGG1P53397 376 aaPredicted RBP3□□□□□ -1.93
SPT4YGR063C MSO1P53604 210 aaKnown RBP3□□□□□ -1.93
SPT4YGR063C NUP53Q03790 475 aa3□□□□□ -1.93
SPT4YGR063C LPP1Q04396 274 aa3□□□□□ -1.93
SPT4YGR063C NAT3Q06504 195 aa3□□□□□ -1.93
SPT4YGR063C YOR376WQ08900 122 aa3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 174.4 ms