RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W ORM1P53224 222 aa2.2□□□□□ -2.06
PRP18YGR006W HHO1P53551 258 aa2.2□□□□□ -2.06
PRP18YGR006W GAS3Q03655 524 aa2.2□□□□□ -2.06
PRP18YGR006W LPP1Q04396 274 aa2.2□□□□□ -2.06
PRP18YGR006W LDB18Q07887 179 aa2.2□□□□□ -2.06
PRP18YGR006W YPL225WQ08971 146 aaKnown RBP2.2□□□□□ -2.06
PRP18YGR006W YPL162CQ12042 273 aa2.2□□□□□ -2.06
PRP18YGR006W PSF1Q12488 208 aa2.2□□□□□ -2.06
PRP18YGR006W TDA8Q6B2U8 126 aa2.2□□□□□ -2.06
PRP18YGR006W CKS1P20486 150 aaKnown RBP2.19□□□□□ -2.06
PRP18YGR006W SPO13P23624 291 aa2.19□□□□□ -2.06
PRP18YGR006W CNB1P25296 175 aa2.19□□□□□ -2.06
PRP18YGR006W STP22P25604 385 aa2.19□□□□□ -2.06
PRP18YGR006W SEC17P32602 292 aa2.19□□□□□ -2.06
PRP18YGR006W SHE2P36068 246 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
PRP18YGR006W MRPL24P36525 258 aaPredicted RBP2.19□□□□□ -2.06
PRP18YGR006W CSH1P38287 376 aa2.19□□□□□ -2.06
PRP18YGR006W RPS20P38701 121 aaKnown RBP2.19□□□□□ -2.06
PRP18YGR006W YHR180WP38868 163 aa2.19□□□□□ -2.06
PRP18YGR006W RFC2P40348 353 aa2.19□□□□□ -2.06
PRP18YGR006W PGD1P40356 397 aa2.19□□□□□ -2.06
PRP18YGR006W TIM13P53299 105 aa2.19□□□□□ -2.06
PRP18YGR006W THI74Q04083 370 aa2.19□□□□□ -2.06
PRP18YGR006W MPD1Q12404 318 aaKnown RBP2.19□□□□□ -2.06
PRP18YGR006W YOR304C-AO14468 76 aa2.18□□□□□ -2.06
PRP18YGR006W PET9P18239 318 aaKnown RBP2.18□□□□□ -2.06
PRP18YGR006W RPS1BP23248 255 aaKnown RBP2.18□□□□□ -2.06
PRP18YGR006W BUD23P25627 275 aaPredicted RBP2.18□□□□□ -2.06
PRP18YGR006W MRP49P32388 137 aa2.18□□□□□ -2.06
PRP18YGR006W YPL073CP40323 161 aa2.18□□□□□ -2.06
PRP18YGR006W AYR1P40471 297 aa2.18□□□□□ -2.06
PRP18YGR006W PGA1P53896 198 aa2.18□□□□□ -2.06
PRP18YGR006W COF1Q03048 143 aaKnown RBP2.18□□□□□ -2.06
PRP18YGR006W CNL1Q06333 122 aa2.18□□□□□ -2.06
PRP18YGR006W FYV7Q12247 151 aa2.18□□□□□ -2.06
PRP18YGR006W ATP14Q12349 124 aa2.18□□□□□ -2.06
PRP18YGR006W YFR032C-BQ8TGU2 87 aa2.18□□□□□ -2.06
PRP18YGR006W NMT1P14743 455 aa2.17□□□□□ -2.06
PRP18YGR006W UGX2P32772 223 aa2.17□□□□□ -2.06
PRP18YGR006W UTP30P36144 274 aaKnown RBP2.17□□□□□ -2.06
PRP18YGR006W VMA7P39111 118 aa2.17□□□□□ -2.06
PRP18YGR006W AVT2P39981 480 aa2.17□□□□□ -2.06
PRP18YGR006W DLS1P40366 167 aa2.17□□□□□ -2.06
PRP18YGR006W GLR1P41921 483 aaKnown RBP2.17□□□□□ -2.06
PRP18YGR006W YMR253CQ04835 414 aa2.17□□□□□ -2.06
PRP18YGR006W FCY1Q12178 158 aa2.17□□□□□ -2.06
PRP18YGR006W DGK1Q12382 290 aa2.17□□□□□ -2.06
PRP18YGR006W SPP41P38904 1435 aa2.17□□□□□ -2.06
PRP18YGR006W MYO2P19524 1574 aaKnown RBP2.16□□□□□ -2.06
PRP18YGR006W RAS2P01120 322 aaKnown RBP2.16□□□□□ -2.06
PRP18YGR006W REP2P03872 296 aa2.16□□□□□ -2.06
PRP18YGR006W TIR1P10863 254 aa2.16□□□□□ -2.06
PRP18YGR006W SUI1P32911 108 aaKnown RBP2.16□□□□□ -2.06
PRP18YGR006W PAN3P36102 679 aaPredicted RBP2.16□□□□□ -2.06
PRP18YGR006W YFR054CP43622 192 aa2.16□□□□□ -2.06
PRP18YGR006W SKI6P46948 246 aaPredicted RBP2.16□□□□□ -2.06
PRP18YGR006W BAT2P47176 376 aaKnown RBP2.16□□□□□ -2.06
PRP18YGR006W AIF1P52923 378 aa2.16□□□□□ -2.06
PRP18YGR006W APS2Q00381 147 aa2.16□□□□□ -2.06
PRP18YGR006W VPS71Q03433 280 aa2.16□□□□□ -2.06
PRP18YGR006W YDL180WQ12301 547 aa2.16□□□□□ -2.06
PRP18YGR006W SPA2P23201 1466 aaKnown RBP2.15□□□□□ -2.06
PRP18YGR006W FMP49A0A023PZB3 126 aa2.15□□□□□ -2.07
PRP18YGR006W DDI2P0CH63 225 aa2.15□□□□□ -2.07
PRP18YGR006W DDI3P0CH64 225 aa2.15□□□□□ -2.07
PRP18YGR006W PHO13P19881 312 aa2.15□□□□□ -2.07
PRP18YGR006W RPC19P28000 142 aaKnown RBP2.15□□□□□ -2.07
PRP18YGR006W SKG1P36169 355 aa2.15□□□□□ -2.07
PRP18YGR006W TRS20P38334 175 aa2.15□□□□□ -2.07
PRP18YGR006W YHR022CP38763 256 aa2.15□□□□□ -2.07
PRP18YGR006W SVP26P38869 228 aa2.15□□□□□ -2.07
PRP18YGR006W AIM2P39721 246 aa2.15□□□□□ -2.07
PRP18YGR006W VTC1P40046 129 aaRIP-Chip data2.15□□□□□ -2.07not detected
PRP18YGR006W PEP8P40335 379 aa2.15□□□□□ -2.07
PRP18YGR006W FIP1P45976 327 aa2.15□□□□□ -2.07
PRP18YGR006W TTI2P47168 421 aa2.15□□□□□ -2.07
PRP18YGR006W YGR017WP53210 297 aa2.15□□□□□ -2.07
PRP18YGR006W YGR039WP53225 103 aa2.15□□□□□ -2.07
PRP18YGR006W YNR062CP53748 327 aa2.15□□□□□ -2.07
PRP18YGR006W YDR366CP87287 132 aa2.15□□□□□ -2.07
PRP18YGR006W CYT2Q00873 224 aa2.15□□□□□ -2.07
PRP18YGR006W AIM36Q03798 255 aa2.15□□□□□ -2.07
PRP18YGR006W YPR114WQ06107 315 aa2.15□□□□□ -2.07
PRP18YGR006W NKP2Q06162 153 aa2.15□□□□□ -2.07
PRP18YGR006W SPC3Q12133 184 aa2.15□□□□□ -2.07
PRP18YGR006W YLR118CQ12354 227 aa2.15□□□□□ -2.07
PRP18YGR006W YLR099W-AQ3E798 87 aa2.15□□□□□ -2.07
PRP18YGR006W REV3P14284 1504 aa2.15□□□□□ -2.07
PRP18YGR006W TSC11P40061 1430 aa2.15□□□□□ -2.07
PRP18YGR006W ATP5P09457 212 aa2.14□□□□□ -2.07
PRP18YGR006W YLR156WP0CE96 114 aa2.14□□□□□ -2.07
PRP18YGR006W YLR159WP0CE97 114 aa2.14□□□□□ -2.07
PRP18YGR006W YLR161WP0CE98 114 aa2.14□□□□□ -2.07
PRP18YGR006W BET1P22804 142 aa2.14□□□□□ -2.07
PRP18YGR006W SRP21P32342 167 aa2.14□□□□□ -2.07
PRP18YGR006W SPT14P32363 452 aa2.14□□□□□ -2.07
PRP18YGR006W SNC2P33328 115 aa2.14□□□□□ -2.07
PRP18YGR006W LHP1P33399 275 aaKnown RBP2.14□□□□□ -2.07
PRP18YGR006W MRPL17P36528 281 aa2.14□□□□□ -2.07
PRP18YGR006W DSE2P38844 325 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 32.4 ms