RNA–Protein interactions for RNA: YGL166W

CUP2, Transcript of Copper-binding transcription factor, yeast

Gene CUP2, Length 678 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUP2	YGL166W	YOR352W	Q08816	343 aa		4.96	□□□□□ -1.62
CUP2	YGL166W	SCM3	Q12334	223 aa		4.96	□□□□□ -1.62
CUP2	YGL166W	CYC3	P06182	269 aa		4.95	□□□□□ -1.62
CUP2	YGL166W	SAR1	P20606	190 aa	Known RBP	4.95	□□□□□ -1.62
CUP2	YGL166W	YEA6	P39953	335 aa		4.95	□□□□□ -1.62
CUP2	YGL166W	RPA14	P50106	137 aa		4.95	□□□□□ -1.62
CUP2	YGL166W	PDR17	P53844	350 aa		4.95	□□□□□ -1.62
CUP2	YGL166W	ERP1	Q05359	219 aa	Known RBP	4.95	□□□□□ -1.62
CUP2	YGL166W	POS5	Q06892	414 aa		4.95	□□□□□ -1.62
CUP2	YGL166W	YPS3	Q12303	508 aa		4.95	□□□□□ -1.62
CUP2	YGL166W	COX2	P00410	251 aa		4.94	□□□□□ -1.62
CUP2	YGL166W	RPS25B	P0C0T4	108 aa	Known RBP	4.94	□□□□□ -1.62
CUP2	YGL166W	PPQ1	P32945	549 aa		4.94	□□□□□ -1.62
CUP2	YGL166W	AVT5	P38176	459 aa		4.94	□□□□□ -1.62
CUP2	YGL166W	YER137C	P40083	148 aa	Known RBP	4.94	□□□□□ -1.62
CUP2	YGL166W	YJR111C	P47148	283 aa	Known RBP	4.94	□□□□□ -1.62
CUP2	YGL166W	LST7	P53237	242 aa		4.94	□□□□□ -1.62
CUP2	YGL166W	YAP1802	P53309	568 aa		4.94	□□□□□ -1.62
CUP2	YGL166W	DID2	P69771	204 aa		4.94	□□□□□ -1.62
CUP2	YGL166W	YLR281C	Q05863	155 aa		4.94	□□□□□ -1.62
CUP2	YGL166W	RRG8	Q06109	277 aa		4.94	□□□□□ -1.62
CUP2	YGL166W	YPR013C	Q12145	317 aa		4.94	□□□□□ -1.62
CUP2	YGL166W	RPS25A	Q3E792	108 aa	Predicted RBP	4.94	□□□□□ -1.62
CUP2	YGL166W	RPS8A	P0CX39	200 aa	Known RBP	4.93	□□□□□ -1.62
CUP2	YGL166W	RPS8B	P0CX40	200 aa	Known RBP	4.93	□□□□□ -1.62
CUP2	YGL166W	ALK2	P32789	676 aa	Predicted RBP	4.93	□□□□□ -1.62
CUP2	YGL166W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
CUP2	YGL166W	SLM6	P38343	150 aa		4.93	□□□□□ -1.62
CUP2	YGL166W	MPC2	P38857	129 aa		4.93	□□□□□ -1.62
CUP2	YGL166W	MST28	P39552	234 aa		4.93	□□□□□ -1.62
CUP2	YGL166W	BDH1	P39714	382 aa		4.93	□□□□□ -1.62
CUP2	YGL166W	CAF16	P43569	289 aa		4.93	□□□□□ -1.62
CUP2	YGL166W	YJR015W	P47090	510 aa		4.93	□□□□□ -1.62
CUP2	YGL166W	MST27	P53176	234 aa		4.93	□□□□□ -1.62
CUP2	YGL166W	YGR018C	P53211	109 aa		4.93	□□□□□ -1.62
CUP2	YGL166W	TIM44	Q01852	431 aa		4.93	□□□□□ -1.62
CUP2	YGL166W	TRI1	Q05024	226 aa		4.93	□□□□□ -1.62
CUP2	YGL166W	TIM18	Q08749	192 aa		4.93	□□□□□ -1.62
CUP2	YGL166W	TAR1	Q8TGM6	124 aa		4.93	□□□□□ -1.62
CUP2	YGL166W	YMR316C-A	I2HB70	103 aa		4.92	□□□□□ -1.62
CUP2	YGL166W	PIS1	P06197	220 aa	Known RBP	4.92	□□□□□ -1.62
CUP2	YGL166W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
CUP2	YGL166W	YCR022C	P25620	114 aa		4.92	□□□□□ -1.62
CUP2	YGL166W	ACB1	P31787	87 aa		4.92	□□□□□ -1.62
CUP2	YGL166W	UPS2	P35200	230 aa		4.92	□□□□□ -1.62
CUP2	YGL166W	SDH4	P37298	181 aa		4.92	□□□□□ -1.62
CUP2	YGL166W	SIM1	P40472	476 aa		4.92	□□□□□ -1.62
CUP2	YGL166W	POR2	P40478	281 aa		4.92	□□□□□ -1.62
CUP2	YGL166W	AGX1	P43567	385 aa		4.92	□□□□□ -1.62
CUP2	YGL166W	DUO1	P53168	247 aa	Known RBP	4.92	□□□□□ -1.62
CUP2	YGL166W	PNC1	P53184	216 aa	Known RBP	4.92	□□□□□ -1.62
CUP2	YGL166W	OCA2	P53949	197 aa		4.92	□□□□□ -1.62
CUP2	YGL166W	YDR274C	P87283	123 aa		4.92	□□□□□ -1.62
CUP2	YGL166W	POM34	Q12445	299 aa		4.92	□□□□□ -1.62
CUP2	YGL166W	AGC1	Q12482	902 aa		4.92	□□□□□ -1.62
CUP2	YGL166W	YHR213W-A	Q8TGT4	77 aa		4.92	□□□□□ -1.62
CUP2	YGL166W	ISN1	Q99312	450 aa		4.92	□□□□□ -1.62
CUP2	YGL166W	CKS1	P20486	150 aa	Known RBP	4.91	□□□□□ -1.62
CUP2	YGL166W	BOL3	P39724	118 aa		4.91	□□□□□ -1.62
CUP2	YGL166W	RTS2	P40962	232 aa		4.91	□□□□□ -1.62
CUP2	YGL166W	ODC1	Q03028	310 aa		4.91	□□□□□ -1.62
CUP2	YGL166W	YMR082C	Q04276	118 aa		4.91	□□□□□ -1.62
CUP2	YGL166W	ATG39	Q06159	398 aa		4.91	□□□□□ -1.62
CUP2	YGL166W	BER1	Q06688	274 aa	Known RBP	4.91	□□□□□ -1.62
CUP2	YGL166W	FCF2	Q12035	217 aa	Predicted RBP	4.91	□□□□□ -1.62
CUP2	YGL166W	MAG1	P22134	296 aa	Known RBP	4.9	□□□□□ -1.63
CUP2	YGL166W	YCR025C	P25352	136 aa		4.9	□□□□□ -1.63
CUP2	YGL166W	FPR2	P32472	135 aa		4.9	□□□□□ -1.63
CUP2	YGL166W	CSH1	P38287	376 aa		4.9	□□□□□ -1.63
CUP2	YGL166W	PTC7	P38797	343 aa		4.9	□□□□□ -1.63
CUP2	YGL166W	YGR269W	P40326	108 aa		4.9	□□□□□ -1.63
CUP2	YGL166W	YJL027C	P47063	138 aa	Predicted RBP	4.9	□□□□□ -1.63
CUP2	YGL166W	SDH7	Q04401	133 aa		4.9	□□□□□ -1.63
CUP2	YGL166W	ARR3	Q06598	404 aa		4.9	□□□□□ -1.63
CUP2	YGL166W	CDC7	P06243	507 aa		4.89	□□□□□ -1.63
CUP2	YGL166W	YHR213W	P0CI67	198 aa		4.89	□□□□□ -1.63
CUP2	YGL166W	POP5	P28005	173 aa		4.89	□□□□□ -1.63
CUP2	YGL166W	AUA1	P32450	94 aa		4.89	□□□□□ -1.63
CUP2	YGL166W	SIP1	P32578	815 aa		4.89	□□□□□ -1.63
CUP2	YGL166W	SHB17	P36136	271 aa	Known RBP	4.89	□□□□□ -1.63
CUP2	YGL166W	SNF11	P38956	169 aa		4.89	□□□□□ -1.63
CUP2	YGL166W	ATG27	P46989	271 aa		4.89	□□□□□ -1.63
CUP2	YGL166W	MIC27	P50945	234 aa		4.89	□□□□□ -1.63
CUP2	YGL166W	ALG13	P53178	202 aa		4.89	□□□□□ -1.63
CUP2	YGL166W	SHH3	Q04487	196 aa		4.89	□□□□□ -1.63
CUP2	YGL166W	LDS2	Q08218	356 aa		4.89	□□□□□ -1.63
CUP2	YGL166W	PRR2	Q12310	699 aa		4.89	□□□□□ -1.63
CUP2	YGL166W	YOR011W-A	Q3E807	68 aa		4.89	□□□□□ -1.63
CUP2	YGL166W	FLO5	P38894	1075 aa		4.88	□□□□□ -1.63
CUP2	YGL166W	YEA4	P40004	342 aa		4.88	□□□□□ -1.63
CUP2	YGL166W	SWM2	P40342	146 aa		4.88	□□□□□ -1.63
CUP2	YGL166W	TDA4	P47153	279 aa		4.88	□□□□□ -1.63
CUP2	YGL166W	YGL117W	P53133	265 aa		4.88	□□□□□ -1.63
CUP2	YGL166W	BOR1	P53838	576 aa		4.88	□□□□□ -1.63
CUP2	YGL166W	FYV6	P53913	173 aa		4.88	□□□□□ -1.63
CUP2	YGL166W	ORM2	Q06144	216 aa		4.88	□□□□□ -1.63
CUP2	YGL166W	CTR3	Q06686	241 aa		4.88	□□□□□ -1.63
CUP2	YGL166W	YGL194C-A	Q2V2P6	80 aa		4.88	□□□□□ -1.63
CUP2	YGL166W	CMC1	P36064	111 aa		4.87	□□□□□ -1.63
CUP2	YGL166W	NRG2	P38082	220 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms