RNA–Protein interactions for RNA: YGL028C

SCW11, Transcript of Cell wall protein with similarity to glucanases, yeast

Gene SCW11, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCW11	YGL028C	SEN2	P16658	377 aa		0.59	□□□□□ -2.32
SCW11	YGL028C	TRX3	P25372	127 aa		0.59	□□□□□ -2.32
SCW11	YGL028C	AHC2	P25649	128 aa		0.59	□□□□□ -2.32
SCW11	YGL028C	ATP7	P30902	174 aa		0.59	□□□□□ -2.32
SCW11	YGL028C	GSP2	P32836	220 aa	Known RBP	0.59	□□□□□ -2.32
SCW11	YGL028C	SFK1	P35735	353 aa		0.59	□□□□□ -2.32
SCW11	YGL028C	MAK5	P38112	773 aa	Predicted RBP	0.59	□□□□□ -2.32
SCW11	YGL028C	FYV4	P38783	130 aa	Predicted RBP	0.59	□□□□□ -2.32
SCW11	YGL028C	SOK1	P40317	901 aa		0.59	□□□□□ -2.32
SCW11	YGL028C	DIG2	Q03373	323 aa	Known RBP	0.59	□□□□□ -2.32
SCW11	YGL028C	AIM34	Q03673	198 aa		0.59	□□□□□ -2.32
SCW11	YGL028C	SHH4	Q06236	168 aa		0.59	□□□□□ -2.32
SCW11	YGL028C	DAS2	Q12084	232 aa		0.59	□□□□□ -2.32
SCW11	YGL028C	YOR015W	Q12169	119 aa		0.59	□□□□□ -2.32
SCW11	YGL028C	DGK1	Q12382	290 aa		0.59	□□□□□ -2.32
SCW11	YGL028C	COA3	Q3E7B2	85 aa		0.59	□□□□□ -2.32
SCW11	YGL028C	YPR014C	Q6B0W2	109 aa		0.59	□□□□□ -2.32
SCW11	YGL028C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.58	□□□□□ -2.32	not detected
SCW11	YGL028C	NSP1	P14907	823 aa	Known RBP	0.58	□□□□□ -2.32
SCW11	YGL028C	YKL102C	P34249	101 aa		0.58	□□□□□ -2.32
SCW11	YGL028C	RRT1	P38192	103 aa		0.58	□□□□□ -2.32
SCW11	YGL028C	NVJ1	P38881	321 aa		0.58	□□□□□ -2.32
SCW11	YGL028C	NSA2	P40078	261 aa	Known RBP	0.58	□□□□□ -2.32
SCW11	YGL028C	MPM1	P40364	252 aa		0.58	□□□□□ -2.32
SCW11	YGL028C	HOP2	P53187	214 aa		0.58	□□□□□ -2.32
SCW11	YGL028C	YLR460C	P54007	376 aa		0.58	□□□□□ -2.32
SCW11	YGL028C	UPS3	Q04006	179 aa		0.58	□□□□□ -2.32
SCW11	YGL028C	GPI17	Q04080	534 aa		0.58	□□□□□ -2.32
SCW11	YGL028C	YDR391C	Q04170	232 aa		0.58	□□□□□ -2.32
SCW11	YGL028C	BRX1	Q08235	291 aa	Known RBP	0.58	□□□□□ -2.32
SCW11	YGL028C	YCR023C	P25351	611 aa		0.57	□□□□□ -2.32
SCW11	YGL028C	YCL042W	P25572	119 aa		0.57	□□□□□ -2.32
SCW11	YGL028C	CPR5	P35176	225 aa		0.57	□□□□□ -2.32
SCW11	YGL028C	POG1	P40473	351 aa		0.57	□□□□□ -2.32
SCW11	YGL028C	NSE4	P43124	402 aa		0.57	□□□□□ -2.32
SCW11	YGL028C	GIM3	P53900	129 aa		0.57	□□□□□ -2.32
SCW11	YGL028C	DML1	Q03652	475 aa		0.57	□□□□□ -2.32
SCW11	YGL028C	YHP1	Q04116	353 aa		0.57	□□□□□ -2.32
SCW11	YGL028C	HPT1	Q04178	221 aa	Known RBP	0.57	□□□□□ -2.32
SCW11	YGL028C	GAL83	Q04739	417 aa		0.57	□□□□□ -2.32
SCW11	YGL028C	YET3	Q07451	203 aa		0.57	□□□□□ -2.32
SCW11	YGL028C	FYV12	Q08559	129 aa		0.57	□□□□□ -2.32
SCW11	YGL028C	GRE1	Q08969	168 aa		0.57	□□□□□ -2.32
SCW11	YGL028C	YOR381W-A	Q3E804	55 aa		0.57	□□□□□ -2.32
SCW11	YGL028C	YBR242W	P38331	238 aa		0.56	□□□□□ -2.32
SCW11	YGL028C	RFC2	P40348	353 aa		0.56	□□□□□ -2.32
SCW11	YGL028C	TTI2	P47168	421 aa		0.56	□□□□□ -2.32
SCW11	YGL028C	SOL1	P50278	321 aa		0.56	□□□□□ -2.32
SCW11	YGL028C	RRP17	Q04031	235 aa	Predicted RBP	0.56	□□□□□ -2.32
SCW11	YGL028C	UPS1	Q05776	175 aa		0.56	□□□□□ -2.32
SCW11	YGL028C	LCL2	Q08045	131 aa		0.56	□□□□□ -2.32
SCW11	YGL028C	TAR1	Q8TGM6	124 aa		0.56	□□□□□ -2.32
SCW11	YGL028C	RPL35A	P0CX84	120 aa	Known RBP	0.56	□□□□□ -2.32
SCW11	YGL028C	RPL35B	P0CX85	120 aa	Known RBP	0.56	□□□□□ -2.32
SCW11	YGL028C	MAK31	P23059	88 aa		0.56	□□□□□ -2.32
SCW11	YGL028C	SEC14	P24280	304 aa	Known RBP	0.56	□□□□□ -2.32
SCW11	YGL028C	STP22	P25604	385 aa		0.56	□□□□□ -2.32
SCW11	YGL028C	UBC8	P28263	218 aa		0.56	□□□□□ -2.32
SCW11	YGL028C	TRR1	P29509	319 aa	Known RBP	0.56	□□□□□ -2.32
SCW11	YGL028C	YBL010C	P32788	280 aa		0.56	□□□□□ -2.32
SCW11	YGL028C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.56	□□□□□ -2.32	not detected
SCW11	YGL028C	MRPL15	P36523	253 aa		0.56	□□□□□ -2.32
SCW11	YGL028C	ETR1	P38071	380 aa		0.56	□□□□□ -2.32
SCW11	YGL028C	YGL235W	P53071	178 aa		0.56	□□□□□ -2.32
SCW11	YGL028C	YIP3	P53633	176 aa		0.56	□□□□□ -2.32
SCW11	YGL028C	PIR1	Q03178	341 aa		0.56	□□□□□ -2.32
SCW11	YGL028C	YMR007W	Q03675	126 aa		0.56	□□□□□ -2.32
SCW11	YGL028C	ELP6	Q04868	273 aa		0.56	□□□□□ -2.32
SCW11	YGL028C	YPR127W	Q06494	345 aa		0.56	□□□□□ -2.32
SCW11	YGL028C	YPR203W	Q08994	102 aa		0.56	□□□□□ -2.32
SCW11	YGL028C	CDC39	P25655	2108 aa	Known RBP	0.55	□□□□□ -2.32
SCW11	YGL028C	HFA1	P32874	2273 aa		0.55	□□□□□ -2.32
SCW11	YGL028C	CHD1	P32657	1468 aa		0.55	□□□□□ -2.32
SCW11	YGL028C	STF2	P16965	84 aa		0.55	□□□□□ -2.32
SCW11	YGL028C	RAD51	P25454	400 aa		0.55	□□□□□ -2.32
SCW11	YGL028C	HSP30	P25619	332 aa		0.55	□□□□□ -2.32
SCW11	YGL028C	EGD2	P38879	174 aa	Known RBP	0.55	□□□□□ -2.32
SCW11	YGL028C	SEC72	P39742	193 aa	Known RBP	0.55	□□□□□ -2.32
SCW11	YGL028C	CCS1	P40202	249 aa	Known RBP	0.55	□□□□□ -2.32
SCW11	YGL028C	RPL37A	P49166	88 aa	Known RBP	0.55	□□□□□ -2.32
SCW11	YGL028C	SBH1	P52870	82 aa		0.55	□□□□□ -2.32
SCW11	YGL028C	YKR005C	Q02203	525 aa		0.55	□□□□□ -2.32
SCW11	YGL028C	ATG38	Q05789	226 aa	Known RBP	0.55	□□□□□ -2.32
SCW11	YGL028C	ATG41	Q12048	136 aa		0.55	□□□□□ -2.32
SCW11	YGL028C	YOR214C	Q12282	236 aa		0.55	□□□□□ -2.32
SCW11	YGL028C	HUA1	P40325	198 aa		0.54	□□□□□ -2.32
SCW11	YGL028C	MET31	Q03081	177 aa		0.54	□□□□□ -2.32
SCW11	YGL028C	RIM9	Q04734	239 aa		0.54	□□□□□ -2.32
SCW11	YGL028C	YMR030W-A	Q3E760	96 aa		0.54	□□□□□ -2.32
SCW11	YGL028C	NUF2	P33895	451 aa		0.53	□□□□□ -2.32
SCW11	YGL028C	XPT1	P47165	209 aa		0.53	□□□□□ -2.32
SCW11	YGL028C	PAC10	P48363	199 aa		0.53	□□□□□ -2.32
SCW11	YGL028C	YNL140C	P53910	189 aa		0.53	□□□□□ -2.32
SCW11	YGL028C	HSK3	P69852	69 aa		0.53	□□□□□ -2.32
SCW11	YGL028C	VPS28	Q02767	242 aa		0.53	□□□□□ -2.32
SCW11	YGL028C	YLR050C	Q12155	161 aa	Known RBP	0.53	□□□□□ -2.32
SCW11	YGL028C	YER188C-A	P0C0V2	99 aa		0.53	□□□□□ -2.33
SCW11	YGL028C	YHL037C	P38733	133 aa		0.53	□□□□□ -2.33
SCW11	YGL028C	YEL073C	P39974	107 aa		0.53	□□□□□ -2.33
SCW11	YGL028C	NQM1	P53228	333 aa	Predicted RBP	0.53	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 53.3 ms