RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C Q0255P03881 472 aa2.15□□□□□ -2.06
MSH4YFL003C RPL9AP05738 191 aaKnown RBP2.15□□□□□ -2.06
MSH4YFL003C HIS3P06633 220 aa2.15□□□□□ -2.06
MSH4YFL003C ADH3P07246 375 aaKnown RBP2.15□□□□□ -2.06
MSH4YFL003C SLM6P38343 150 aa2.15□□□□□ -2.06
MSH4YFL003C MED6P38782 295 aa2.15□□□□□ -2.06
MSH4YFL003C YHR125WP38831 101 aa2.15□□□□□ -2.06
MSH4YFL003C RPL9BP51401 191 aaKnown RBP2.15□□□□□ -2.06
MSH4YFL003C BET1P22804 142 aa2.15□□□□□ -2.07
MSH4YFL003C SKG1P36169 355 aa2.15□□□□□ -2.07
MSH4YFL003C ARC15P40518 154 aaRIP-Chip data2.15□□□□□ -2.07not detected
MSH4YFL003C TRM12Q04235 462 aa2.15□□□□□ -2.07
MSH4YFL003C YLR046CQ12253 270 aa2.15□□□□□ -2.07
MSH4YFL003C URA5P13298 226 aaKnown RBP2.14□□□□□ -2.07
MSH4YFL003C UPS2P35200 230 aa2.14□□□□□ -2.07
MSH4YFL003C MRPS9P38120 278 aa2.14□□□□□ -2.07
MSH4YFL003C GIM4P40005 111 aaKnown RBP2.14□□□□□ -2.07
MSH4YFL003C PIR5P46999 287 aa2.14□□□□□ -2.07
MSH4YFL003C TDA4P47153 279 aa2.14□□□□□ -2.07
MSH4YFL003C YOR268CQ08734 132 aa2.14□□□□□ -2.07
MSH4YFL003C SPO13P23624 291 aa2.14□□□□□ -2.07
MSH4YFL003C BUB2P26448 306 aaPredicted RBP2.14□□□□□ -2.07
MSH4YFL003C YGL088WP53151 121 aa2.14□□□□□ -2.07
MSH4YFL003C YPR014CQ6B0W2 109 aa2.14□□□□□ -2.07
MSH4YFL003C TEL1P38110 2787 aa2.13□□□□□ -2.07
MSH4YFL003C CKS1P20486 150 aaKnown RBP2.13□□□□□ -2.07
MSH4YFL003C ATP15P21306 62 aa2.13□□□□□ -2.07
MSH4YFL003C TKL2P33315 681 aa2.13□□□□□ -2.07
MSH4YFL003C CTR2P38865 189 aa2.13□□□□□ -2.07
MSH4YFL003C ECO1P43605 281 aa2.13□□□□□ -2.07
MSH4YFL003C GON7P46984 123 aa2.13□□□□□ -2.07
MSH4YFL003C SNX4P47057 423 aa2.13□□□□□ -2.07
MSH4YFL003C YGL101WP53144 215 aa2.13□□□□□ -2.07
MSH4YFL003C YGR042WP53227 271 aa2.13□□□□□ -2.07
MSH4YFL003C TMA20P89886 181 aaPredicted RBP2.13□□□□□ -2.07
MSH4YFL003C CDC8P00572 216 aa2.13□□□□□ -2.07
MSH4YFL003C OCH1P31755 480 aa2.13□□□□□ -2.07
MSH4YFL003C SMD3P43321 101 aaKnown RBP2.13□□□□□ -2.07
MSH4YFL003C SOL1P50278 321 aa2.13□□□□□ -2.07
MSH4YFL003C YPR202WQ08993 238 aa2.13□□□□□ -2.07
MSH4YFL003C AKR2Q12013 749 aa2.13□□□□□ -2.07
MSH4YFL003C UBI4P0CG63 381 aaKnown RBP2.12□□□□□ -2.07
MSH4YFL003C YER188WP40103 239 aa2.12□□□□□ -2.07
MSH4YFL003C RFC2P40348 353 aa2.12□□□□□ -2.07
MSH4YFL003C SER2P42941 309 aa2.12□□□□□ -2.07
MSH4YFL003C YDR476CQ03362 224 aa2.12□□□□□ -2.07
MSH4YFL003C PKR1Q03880 122 aaKnown RBP2.12□□□□□ -2.07
MSH4YFL003C YPR063CQ12160 140 aa2.12□□□□□ -2.07
MSH4YFL003C YDL180WQ12301 547 aa2.12□□□□□ -2.07
MSH4YFL003C IDP1P21954 428 aaKnown RBP2.12□□□□□ -2.07
MSH4YFL003C MID2P36027 376 aa2.12□□□□□ -2.07
MSH4YFL003C IPI1P38803 334 aaPredicted RBP2.12□□□□□ -2.07
MSH4YFL003C CYC2P38909 366 aa2.12□□□□□ -2.07
MSH4YFL003C TIF34P40217 347 aaKnown RBP2.12□□□□□ -2.07
MSH4YFL003C IES4Q08561 116 aa2.12□□□□□ -2.07
MSH4YFL003C TSC3Q3E790 80 aa2.12□□□□□ -2.07
MSH4YFL003C SAS5Q99314 248 aa2.12□□□□□ -2.07
MSH4YFL003C TAO3P40468 2376 aa2.12□□□□□ -2.07
MSH4YFL003C PDR18P53756 1333 aa2.12□□□□□ -2.07
MSH4YFL003C MLP1Q02455 1875 aaKnown RBP2.12□□□□□ -2.07
MSH4YFL003C AIM2P39721 246 aa2.11□□□□□ -2.07
MSH4YFL003C GPI14P47088 403 aaKnown RBP2.11□□□□□ -2.07
MSH4YFL003C TTI2P47168 421 aa2.11□□□□□ -2.07
MSH4YFL003C YGL204CP53089 101 aa2.11□□□□□ -2.07
MSH4YFL003C YGR026WP53217 278 aa2.11□□□□□ -2.07
MSH4YFL003C DGK1Q12382 290 aa2.11□□□□□ -2.07
MSH4YFL003C TIM9O74700 87 aa2.11□□□□□ -2.07
MSH4YFL003C CCA1P21269 546 aa2.11□□□□□ -2.07
MSH4YFL003C MRPL17P36528 281 aa2.11□□□□□ -2.07
MSH4YFL003C MNN5P46982 586 aa2.11□□□□□ -2.07
MSH4YFL003C DAS2Q12084 232 aa2.11□□□□□ -2.07
MSH4YFL003C PBI2P0CT04 75 aaKnown RBP2.1□□□□□ -2.07
MSH4YFL003C CSH1P38287 376 aa2.1□□□□□ -2.07
MSH4YFL003C XPT1P47165 209 aa2.1□□□□□ -2.07
MSH4YFL003C YOR342CQ12182 319 aa2.1□□□□□ -2.07
MSH4YFL003C FKS1P38631 1876 aaKnown RBP2.1□□□□□ -2.07
MSH4YFL003C ECM29P38737 1868 aa2.1□□□□□ -2.07
MSH4YFL003C YHR032W-AP0C5N6 59 aa2.1□□□□□ -2.07
MSH4YFL003C YEA4P40004 342 aa2.1□□□□□ -2.07
MSH4YFL003C APQ12P40532 138 aa2.1□□□□□ -2.07
MSH4YFL003C LSM3P57743 89 aaKnown RBP2.1□□□□□ -2.07
MSH4YFL003C THI74Q04083 370 aa2.1□□□□□ -2.07
MSH4YFL003C NAT3Q06504 195 aa2.1□□□□□ -2.07
MSH4YFL003C YOL014WQ08110 124 aa2.1□□□□□ -2.07
MSH4YFL003C RPL2AP0CX45 254 aaKnown RBP2.09□□□□□ -2.07
MSH4YFL003C RPL2BP0CX46 254 aaKnown RBP2.09□□□□□ -2.07
MSH4YFL003C PEX34P25584 144 aa2.09□□□□□ -2.07
MSH4YFL003C OPY1P38271 328 aa2.09□□□□□ -2.07
MSH4YFL003C NSG1P38837 291 aa2.09□□□□□ -2.07
MSH4YFL003C AVT2P39981 480 aa2.09□□□□□ -2.07
MSH4YFL003C AGE2P40529 298 aa2.09□□□□□ -2.07
MSH4YFL003C ORM1P53224 222 aa2.09□□□□□ -2.07
MSH4YFL003C YLR412C-AQ3E742 68 aa2.09□□□□□ -2.07
MSH4YFL003C YML100W-AQ8TGT0 57 aa2.09□□□□□ -2.07
MSH4YFL003C VMA11P32842 164 aa2.09□□□□□ -2.08
MSH4YFL003C YGR201CP42936 225 aa2.09□□□□□ -2.08
MSH4YFL003C YFL019CP43576 117 aa2.09□□□□□ -2.08
MSH4YFL003C DSK2P48510 373 aa2.09□□□□□ -2.08
MSH4YFL003C SFK1P35735 353 aa2.08□□□□□ -2.08
MSH4YFL003C YKR032WP36127 104 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms