RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W IML3P38265 245 aa4.41□□□□□ -1.7
UBP9YER098W SLM6P38343 150 aa4.41□□□□□ -1.7
UBP9YER098W YHL044WP38727 235 aa4.41□□□□□ -1.7
UBP9YER098W YER134CP40081 178 aa4.41□□□□□ -1.7
UBP9YER098W YGL204CP53089 101 aa4.41□□□□□ -1.7
UBP9YER098W CDH1P53197 566 aa4.41□□□□□ -1.7
UBP9YER098W MTM1P53320 366 aa4.41□□□□□ -1.7
UBP9YER098W YPL080CQ02826 108 aa4.41□□□□□ -1.7
UBP9YER098W CTS2Q06350 511 aa4.41□□□□□ -1.7
UBP9YER098W YOR304C-AO14468 76 aa4.41□□□□□ -1.7
UBP9YER098W PAI3P01094 68 aa4.41□□□□□ -1.7
UBP9YER098W CRC1Q12289 327 aa4.41□□□□□ -1.7
UBP9YER098W MBF1O14467 151 aaKnown RBP4.4□□□□□ -1.71
UBP9YER098W QCR2P07257 368 aa4.4□□□□□ -1.71
UBP9YER098W PAU1P0CE88 120 aa4.4□□□□□ -1.71
UBP9YER098W PAU14P0CE89 120 aa4.4□□□□□ -1.71
UBP9YER098W PAU6P0CE90 120 aa4.4□□□□□ -1.71
UBP9YER098W PAU18P0CE91 120 aa4.4□□□□□ -1.71
UBP9YER098W PAU8P0CE92 120 aa4.4□□□□□ -1.71
UBP9YER098W PAU11P0CE93 120 aa4.4□□□□□ -1.71
UBP9YER098W SPO13P23624 291 aa4.4□□□□□ -1.71
UBP9YER098W MNS1P32906 549 aa4.4□□□□□ -1.71
UBP9YER098W PAU13P38725 120 aa4.4□□□□□ -1.71
UBP9YER098W LST7P53237 242 aa4.4□□□□□ -1.71
UBP9YER098W PAU4P53427 120 aa4.4□□□□□ -1.71
UBP9YER098W PAU10Q03050 120 aa4.4□□□□□ -1.71
UBP9YER098W PAU20Q08322 120 aa4.4□□□□□ -1.71
UBP9YER098W TIM18Q08749 192 aa4.4□□□□□ -1.71
UBP9YER098W PEX11Q12462 236 aa4.4□□□□□ -1.71
UBP9YER098W PAU9Q3E770 120 aa4.4□□□□□ -1.71
UBP9YER098W ANB1P19211 157 aa4.39□□□□□ -1.71
UBP9YER098W TRR1P29509 319 aaKnown RBP4.39□□□□□ -1.71
UBP9YER098W PMU1P36069 295 aa4.39□□□□□ -1.71
UBP9YER098W UMP1P38293 148 aa4.39□□□□□ -1.71
UBP9YER098W YBR292CP38357 123 aa4.39□□□□□ -1.71
UBP9YER098W PFS1P38872 237 aa4.39□□□□□ -1.71
UBP9YER098W SNU13P39990 126 aaKnown RBP4.39□□□□□ -1.71
UBP9YER098W SMD3P43321 101 aaKnown RBP4.39□□□□□ -1.71
UBP9YER098W YJL028WP47062 111 aa4.39□□□□□ -1.71
UBP9YER098W ERG25P53045 309 aa4.39□□□□□ -1.71
UBP9YER098W YGR117CP53270 476 aa4.39□□□□□ -1.71
UBP9YER098W DAD3P69850 94 aa4.39□□□□□ -1.71
UBP9YER098W YPL077CQ02831 240 aa4.39□□□□□ -1.71
UBP9YER098W PIR3Q03180 325 aa4.39□□□□□ -1.71
UBP9YER098W FCY22Q12119 530 aa4.39□□□□□ -1.71
UBP9YER098W YPR064WQ12492 139 aa4.39□□□□□ -1.71
UBP9YER098W URA5P13298 226 aaKnown RBP4.39□□□□□ -1.71
UBP9YER098W AGA2P32781 87 aa4.39□□□□□ -1.71
UBP9YER098W FIG1P38224 298 aa4.39□□□□□ -1.71
UBP9YER098W SHO1P40073 367 aa4.39□□□□□ -1.71
UBP9YER098W TTI2P47168 421 aa4.39□□□□□ -1.71
UBP9YER098W ERG13P54839 491 aaKnown RBP4.39□□□□□ -1.71
UBP9YER098W RPL13AQ12690 199 aaPredicted RBP4.39□□□□□ -1.71
UBP9YER098W YOS1Q3E834 85 aa4.39□□□□□ -1.71
UBP9YER098W APS2Q00381 147 aa4.38□□□□□ -1.71
UBP9YER098W BSC6Q08280 497 aa4.38□□□□□ -1.71
UBP9YER098W PAU16P35994 123 aa4.38□□□□□ -1.71
UBP9YER098W TAE1P38340 232 aa4.38□□□□□ -1.71
UBP9YER098W YHR127WP38833 243 aaKnown RBP4.38□□□□□ -1.71
UBP9YER098W RPL13BP40212 199 aaKnown RBP4.38□□□□□ -1.71
UBP9YER098W RNH201P53942 307 aa4.38□□□□□ -1.71
UBP9YER098W YMR082CQ04276 118 aa4.38□□□□□ -1.71
UBP9YER098W NAT3Q06504 195 aa4.38□□□□□ -1.71
UBP9YER098W LOA1Q06508 300 aa4.38□□□□□ -1.71
UBP9YER098W PRP46Q12417 451 aaPredicted RBP4.38□□□□□ -1.71
UBP9YER098W COA2Q3E823 68 aa4.38□□□□□ -1.71
UBP9YER098W YCR075W-AQ3E830 75 aa4.38□□□□□ -1.71
UBP9YER098W YCR022CP25620 114 aa4.37□□□□□ -1.71
UBP9YER098W YNL198CP40166 100 aa4.37□□□□□ -1.71
UBP9YER098W YJL118WP47022 219 aa4.37□□□□□ -1.71
UBP9YER098W RPL15BP54780 204 aaPredicted RBP4.37□□□□□ -1.71
UBP9YER098W RPL21AQ02753 160 aaKnown RBP4.37□□□□□ -1.71
UBP9YER098W YPR174CQ06616 221 aaPredicted RBP4.37□□□□□ -1.71
UBP9YER098W RPL21BQ12672 160 aaKnown RBP4.37□□□□□ -1.71
UBP9YER098W FMP49A0A023PZB3 126 aa4.37□□□□□ -1.71
UBP9YER098W YCR025CP25352 136 aa4.37□□□□□ -1.71
UBP9YER098W MDH3P32419 343 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
UBP9YER098W SGE1P33335 543 aa4.37□□□□□ -1.71
UBP9YER098W SHB17P36136 271 aaKnown RBP4.37□□□□□ -1.71
UBP9YER098W OM14P38325 134 aa4.37□□□□□ -1.71
UBP9YER098W PRE5P40302 234 aaKnown RBP4.37□□□□□ -1.71
UBP9YER098W YIL067CP40514 678 aa4.37□□□□□ -1.71
UBP9YER098W SCW10Q04951 389 aa4.37□□□□□ -1.71
UBP9YER098W ADH1P00330 348 aaKnown RBP4.36□□□□□ -1.71
UBP9YER098W ARF2P19146 181 aaKnown RBP4.36□□□□□ -1.71
UBP9YER098W MCK1P21965 375 aaKnown RBP4.36□□□□□ -1.71
UBP9YER098W ARO4P32449 370 aaKnown RBP4.36□□□□□ -1.71
UBP9YER098W RPB11P38902 120 aa4.36□□□□□ -1.71
UBP9YER098W TEM1P38987 245 aa4.36□□□□□ -1.71
UBP9YER098W MST28P39552 234 aa4.36□□□□□ -1.71
UBP9YER098W YND1P40009 630 aa4.36□□□□□ -1.71
UBP9YER098W APQ12P40532 138 aa4.36□□□□□ -1.71
UBP9YER098W PDR17P53844 350 aa4.36□□□□□ -1.71
UBP9YER098W TSA2Q04120 196 aa4.36□□□□□ -1.71
UBP9YER098W MRX8Q05473 314 aa4.36□□□□□ -1.71
UBP9YER098W YOR387CQ08910 206 aa4.36□□□□□ -1.71
UBP9YER098W UBA3Q99344 299 aa4.36□□□□□ -1.71
UBP9YER098W YER190C-BP0CX94 160 aa4.35□□□□□ -1.71
UBP9YER098W YEL077W-AP0CX95 160 aa4.35□□□□□ -1.71
UBP9YER098W YGR296C-BP0CX96 160 aa4.35□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 59.5 ms