RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C CCW14O13547 238 aa8.73□□□□□ -1.01
SPC25YER018C SOD1P00445 154 aaKnown RBP8.73□□□□□ -1.01
SPC25YER018C AHT1P29589 182 aa8.73□□□□□ -1.01
SPC25YER018C WWM1P43582 211 aaKnown RBP8.73□□□□□ -1.01
SPC25YER018C CTR3Q06686 241 aa8.73□□□□□ -1.01
SPC25YER018C RAD28Q12021 506 aa8.73□□□□□ -1.01
SPC25YER018C RKI1Q12189 258 aa8.73□□□□□ -1.01
SPC25YER018C YOR097CQ12274 175 aaPredicted RBP8.73□□□□□ -1.01
SPC25YER018C ILV5P06168 395 aaKnown RBP8.72□□□□□ -1.01
SPC25YER018C QCR9P22289 66 aa8.72□□□□□ -1.01
SPC25YER018C SRB6P32570 121 aa8.72□□□□□ -1.01
SPC25YER018C MRPL38P35996 138 aaPredicted RBP8.72□□□□□ -1.01
SPC25YER018C RIB5P38145 238 aa8.72□□□□□ -1.01
SPC25YER018C QDR3P38227 689 aa8.72□□□□□ -1.01
SPC25YER018C PTC7P38797 343 aa8.72□□□□□ -1.01
SPC25YER018C YMR007WQ03675 126 aa8.72□□□□□ -1.01
SPC25YER018C YBL059WP34224 193 aa8.71□□□□□ -1.02
SPC25YER018C YBL071CP38185 102 aa8.71□□□□□ -1.02
SPC25YER018C GPP2P40106 250 aaKnown RBP8.71□□□□□ -1.02
SPC25YER018C GNP1P48813 663 aa8.71□□□□□ -1.02
SPC25YER018C MIC27P50945 234 aa8.71□□□□□ -1.02
SPC25YER018C BOR1P53838 576 aa8.71□□□□□ -1.02
SPC25YER018C ISU1Q03020 165 aa8.71□□□□□ -1.02
SPC25YER018C SHH3Q04487 196 aa8.71□□□□□ -1.02
SPC25YER018C VMA9Q3E7B6 73 aa8.71□□□□□ -1.02
SPC25YER018C YMR316C-AI2HB70 103 aa8.7□□□□□ -1.02
SPC25YER018C RPL14AP36105 138 aaKnown RBP8.7□□□□□ -1.02
SPC25YER018C SHB17P36136 271 aaKnown RBP8.7□□□□□ -1.02
SPC25YER018C RPL14BP38754 138 aaKnown RBP8.7□□□□□ -1.02
SPC25YER018C TIF11P38912 153 aaKnown RBP8.7□□□□□ -1.02
SPC25YER018C SME1Q12330 94 aaPredicted RBP8.7□□□□□ -1.02
SPC25YER018C PIS1P06197 220 aaKnown RBP8.69□□□□□ -1.02
SPC25YER018C DFR1P07807 211 aaKnown RBP RIP-Chip data8.69□□□□□ -1.02not detected
SPC25YER018C LDS1P31379 325 aa8.69□□□□□ -1.02
SPC25YER018C YPS1P32329 569 aa8.69□□□□□ -1.02
SPC25YER018C FPR2P32472 135 aa8.69□□□□□ -1.02
SPC25YER018C DER1P38307 211 aa8.69□□□□□ -1.02
SPC25YER018C SMD3P43321 101 aaKnown RBP8.69□□□□□ -1.02
SPC25YER018C RIB4P50861 169 aaPredicted RBP8.69□□□□□ -1.02
SPC25YER018C CAF40P53829 373 aa8.69□□□□□ -1.02
SPC25YER018C AVO2Q04749 426 aa8.69□□□□□ -1.02
SPC25YER018C SDO1Q07953 250 aaKnown RBP8.69□□□□□ -1.02
SPC25YER018C IRC23Q08416 157 aa8.69□□□□□ -1.02
SPC25YER018C YAR068WP39564 161 aa8.68□□□□□ -1.02
SPC25YER018C RTS2P40962 232 aa8.68□□□□□ -1.02
SPC25YER018C LST7P53237 242 aa8.68□□□□□ -1.02
SPC25YER018C PBP4Q07362 185 aaKnown RBP8.68□□□□□ -1.02
SPC25YER018C TY1A-DR3Q12441 440 aa8.68□□□□□ -1.02
SPC25YER018C YKL075CP36083 450 aa8.67□□□□□ -1.02
SPC25YER018C PRS4P38063 326 aaPredicted RBP8.67□□□□□ -1.02
SPC25YER018C CDS1P38221 457 aa8.67□□□□□ -1.02
SPC25YER018C DOG2P38773 246 aa8.67□□□□□ -1.02
SPC25YER018C DOG1P38774 246 aa8.67□□□□□ -1.02
SPC25YER018C BDH1P39714 382 aa8.67□□□□□ -1.02
SPC25YER018C RXT3Q07458 294 aa8.67□□□□□ -1.02
SPC25YER018C YCR022CP25620 114 aa8.66□□□□□ -1.02
SPC25YER018C AVT5P38176 459 aa8.66□□□□□ -1.02
SPC25YER018C RRT1P38192 103 aa8.66□□□□□ -1.02
SPC25YER018C CSH1P38287 376 aa8.66□□□□□ -1.02
SPC25YER018C YGR018CP53211 109 aa8.66□□□□□ -1.02
SPC25YER018C PAU4P53427 120 aa8.66□□□□□ -1.02
SPC25YER018C DAL3P32459 195 aa8.65□□□□□ -1.02
SPC25YER018C TAX4P47030 604 aa8.65□□□□□ -1.02
SPC25YER018C DUG3P53871 357 aa8.65□□□□□ -1.02
SPC25YER018C ATC1Q04005 294 aa8.65□□□□□ -1.02
SPC25YER018C Q0142Q9ZZW4 58 aa8.65□□□□□ -1.02
SPC25YER018C MRP2P10663 115 aaPredicted RBP8.64□□□□□ -1.03
SPC25YER018C INO2P26798 304 aa8.64□□□□□ -1.03
SPC25YER018C ACP1P32463 125 aa8.64□□□□□ -1.03
SPC25YER018C ALK2P32789 676 aaPredicted RBP8.64□□□□□ -1.03
SPC25YER018C YCR041WP37265 110 aa8.64□□□□□ -1.03
SPC25YER018C ATG27P46989 271 aa8.64□□□□□ -1.03
SPC25YER018C SWT21P53873 357 aaPredicted RBP8.64□□□□□ -1.03
SPC25YER018C SPG4Q04438 115 aa8.64□□□□□ -1.03
SPC25YER018C YOR352WQ08816 343 aa8.64□□□□□ -1.03
SPC25YER018C RPS2P25443 254 aaKnown RBP8.63□□□□□ -1.03
SPC25YER018C SAS2P40963 338 aa8.63□□□□□ -1.03
SPC25YER018C CPD1P53314 239 aa8.63□□□□□ -1.03
SPC25YER018C SDH7Q04401 133 aa8.63□□□□□ -1.03
SPC25YER018C PCC1Q3E833 88 aa8.63□□□□□ -1.03
SPC25YER018C CDC7P06243 507 aa8.62□□□□□ -1.03
SPC25YER018C PAU1P0CE88 120 aa8.62□□□□□ -1.03
SPC25YER018C PAU14P0CE89 120 aa8.62□□□□□ -1.03
SPC25YER018C PAU6P0CE90 120 aa8.62□□□□□ -1.03
SPC25YER018C PAU18P0CE91 120 aa8.62□□□□□ -1.03
SPC25YER018C PAU8P0CE92 120 aa8.62□□□□□ -1.03
SPC25YER018C PAU11P0CE93 120 aa8.62□□□□□ -1.03
SPC25YER018C PAU13P38725 120 aa8.62□□□□□ -1.03
SPC25YER018C PAU10Q03050 120 aa8.62□□□□□ -1.03
SPC25YER018C YML122CQ03207 126 aa8.62□□□□□ -1.03
SPC25YER018C PAU20Q08322 120 aa8.62□□□□□ -1.03
SPC25YER018C PAU9Q3E770 120 aa8.62□□□□□ -1.03
SPC25YER018C PET494P07390 489 aaPredicted RBP8.61□□□□□ -1.03
SPC25YER018C VPS55P47111 140 aa8.61□□□□□ -1.03
SPC25YER018C DSK2P48510 373 aa8.61□□□□□ -1.03
SPC25YER018C YMR181CQ03231 154 aa8.61□□□□□ -1.03
SPC25YER018C TY1A-DR4O74302 440 aa8.6□□□□□ -1.03
SPC25YER018C TY1A-AP0CX57 440 aa8.6□□□□□ -1.03
SPC25YER018C TY1A-PR1P0CX58 440 aa8.6□□□□□ -1.03
SPC25YER018C TY1A-ORP0CX59 440 aa8.6□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 37.9 ms