RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C UFD1P53044 361 aa0.88□□□□□ -2.27
SEC3YER008C YGL193CP53097 103 aa0.88□□□□□ -2.27
SEC3YER008C GRH1Q04410 372 aaKnown RBP0.88□□□□□ -2.27
SEC3YER008C MRX8Q05473 314 aa0.88□□□□□ -2.27
SEC3YER008C DTD1Q07648 150 aaKnown RBP0.88□□□□□ -2.27
SEC3YER008C MCP1Q12106 302 aa0.88□□□□□ -2.27
SEC3YER008C MHT1Q12525 324 aa0.88□□□□□ -2.27
SEC3YER008C NUF2P33895 451 aa0.88□□□□□ -2.27
SEC3YER008C YBR063CP38083 404 aa0.88□□□□□ -2.27
SEC3YER008C FAR7P43592 221 aa0.88□□□□□ -2.27
SEC3YER008C THI74Q04083 370 aa0.88□□□□□ -2.27
SEC3YER008C YDR124WQ04608 324 aa0.88□□□□□ -2.27
SEC3YER008C SUE1Q06524 206 aa0.88□□□□□ -2.27
SEC3YER008C MSB2P32334 1306 aa0.88□□□□□ -2.27
SEC3YER008C RPL30P14120 105 aaKnown RBP0.88□□□□□ -2.27
SEC3YER008C OCH1P31755 480 aa0.88□□□□□ -2.27
SEC3YER008C RCN1P36054 211 aa0.88□□□□□ -2.27
SEC3YER008C ECM34P38728 170 aa0.88□□□□□ -2.27
SEC3YER008C PRE5P40302 234 aaKnown RBP0.88□□□□□ -2.27
SEC3YER008C GLR1P41921 483 aaKnown RBP0.88□□□□□ -2.27
SEC3YER008C SBH1P52870 82 aa0.88□□□□□ -2.27
SEC3YER008C YGL101WP53144 215 aa0.88□□□□□ -2.27
SEC3YER008C YNR077CP53758 84 aa0.88□□□□□ -2.27
SEC3YER008C YLR050CQ12155 161 aaKnown RBP0.88□□□□□ -2.27
SEC3YER008C PST1Q12355 444 aa0.88□□□□□ -2.27
SEC3YER008C HTL1Q9URQ5 78 aa0.88□□□□□ -2.27
SEC3YER008C RPL40AP0CH08 128 aaKnown RBP0.87□□□□□ -2.27
SEC3YER008C RPL40BP0CH09 128 aaKnown RBP0.87□□□□□ -2.27
SEC3YER008C SCL1P21243 252 aaKnown RBP0.87□□□□□ -2.27
SEC3YER008C SEC17P32602 292 aa0.87□□□□□ -2.27
SEC3YER008C PHO88P38264 188 aaPredicted RBP0.87□□□□□ -2.27
SEC3YER008C HMF1P40037 129 aaKnown RBP0.87□□□□□ -2.27
SEC3YER008C FCY21P40039 528 aa0.87□□□□□ -2.27
SEC3YER008C VTC1P40046 129 aaRIP-Chip data0.87□□□□□ -2.27not detected
SEC3YER008C YER188WP40103 239 aa0.87□□□□□ -2.27
SEC3YER008C YFL019CP43576 117 aa0.87□□□□□ -2.27
SEC3YER008C YET3Q07451 203 aa0.87□□□□□ -2.27
SEC3YER008C RPB5P20434 215 aa0.87□□□□□ -2.27
SEC3YER008C FYV4P38783 130 aaPredicted RBP0.87□□□□□ -2.27
SEC3YER008C LSM12P38828 187 aaKnown RBP0.87□□□□□ -2.27
SEC3YER008C YFL012WP43580 148 aa0.87□□□□□ -2.27
SEC3YER008C YDR476CQ03362 224 aa0.87□□□□□ -2.27
SEC3YER008C NAT3Q06504 195 aa0.87□□□□□ -2.27
SEC3YER008C YLR046CQ12253 270 aa0.87□□□□□ -2.27
SEC3YER008C IDP1P21954 428 aaKnown RBP0.87□□□□□ -2.27
SEC3YER008C CNB1P25296 175 aa0.87□□□□□ -2.27
SEC3YER008C RSA4P25382 515 aaKnown RBP0.87□□□□□ -2.27
SEC3YER008C SFC1P33303 322 aa0.87□□□□□ -2.27
SEC3YER008C FMP23P38231 175 aa0.87□□□□□ -2.27
SEC3YER008C YFR054CP43622 192 aa0.87□□□□□ -2.27
SEC3YER008C RIM9Q04734 239 aa0.87□□□□□ -2.27
SEC3YER008C CYR1P08678 2026 aaKnown RBP0.87□□□□□ -2.27
SEC3YER008C SEN2P16658 377 aa0.86□□□□□ -2.27
SEC3YER008C RNP1P32385 249 aa0.86□□□□□ -2.27
SEC3YER008C MRPS9P38120 278 aa0.86□□□□□ -2.27
SEC3YER008C RPF1P38805 295 aaKnown RBP0.86□□□□□ -2.27
SEC3YER008C ASP1P38986 381 aaPredicted RBP0.86□□□□□ -2.27
SEC3YER008C CMD1P06787 147 aaKnown RBP0.86□□□□□ -2.27
SEC3YER008C GSP1P32835 219 aaKnown RBP0.86□□□□□ -2.27
SEC3YER008C GSP2P32836 220 aaKnown RBP0.86□□□□□ -2.27
SEC3YER008C ETR1P38071 380 aa0.86□□□□□ -2.27
SEC3YER008C REE1P40893 198 aa0.86□□□□□ -2.27
SEC3YER008C ALG9P53868 555 aaKnown RBP0.86□□□□□ -2.27
SEC3YER008C SLM2P53955 656 aa0.86□□□□□ -2.27
SEC3YER008C YNL010WP53981 241 aaKnown RBP0.86□□□□□ -2.27
SEC3YER008C DGK1Q12382 290 aa0.86□□□□□ -2.27
SEC3YER008C TIM9O74700 87 aa0.86□□□□□ -2.27
SEC3YER008C YER137CP40083 148 aaKnown RBP0.86□□□□□ -2.27
SEC3YER008C YER189WP40104 122 aa0.86□□□□□ -2.27
SEC3YER008C GAL83Q04739 417 aa0.86□□□□□ -2.27
SEC3YER008C FCF1Q05498 189 aaPredicted RBP0.86□□□□□ -2.27
SEC3YER008C YDR278CQ05612 105 aa0.86□□□□□ -2.27
SEC3YER008C NSP1P14907 823 aaKnown RBP0.86□□□□□ -2.27
SEC3YER008C SEC14P24280 304 aaKnown RBP0.86□□□□□ -2.27
SEC3YER008C MGT1P26188 188 aa0.86□□□□□ -2.27
SEC3YER008C UGX2P32772 223 aa0.86□□□□□ -2.27
SEC3YER008C RPS1AP33442 255 aaKnown RBP0.86□□□□□ -2.27
SEC3YER008C YHR140WP38842 239 aa0.86□□□□□ -2.27
SEC3YER008C MPC3P53311 146 aa0.86□□□□□ -2.27
SEC3YER008C TMA20P89886 181 aaPredicted RBP0.86□□□□□ -2.27
SEC3YER008C YPL257WQ08974 193 aa0.86□□□□□ -2.27
SEC3YER008C TSC3Q3E790 80 aa0.86□□□□□ -2.27
SEC3YER008C RPB3P16370 318 aaKnown RBP0.85□□□□□ -2.27
SEC3YER008C FPR1P20081 114 aaKnown RBP0.85□□□□□ -2.27
SEC3YER008C YAR068WP39564 161 aa0.85□□□□□ -2.27
SEC3YER008C YEA4P40004 342 aa0.85□□□□□ -2.27
SEC3YER008C RFC2P40348 353 aa0.85□□□□□ -2.27
SEC3YER008C SNX4P47057 423 aa0.85□□□□□ -2.27
SEC3YER008C LSM3P57743 89 aaKnown RBP0.85□□□□□ -2.27
SEC3YER008C YMD8Q03697 442 aa0.85□□□□□ -2.27
SEC3YER008C RDS3Q06835 107 aaPredicted RBP0.85□□□□□ -2.27
SEC3YER008C PST2Q12335 198 aaKnown RBP0.85□□□□□ -2.27
SEC3YER008C SLH1P53327 1967 aaKnown RBP0.85□□□□□ -2.27
SEC3YER008C YLR462WO13556 202 aa0.85□□□□□ -2.27
SEC3YER008C SGA1P08019 549 aa0.85□□□□□ -2.27
SEC3YER008C RPS23AP0CX29 145 aaKnown RBP0.85□□□□□ -2.27
SEC3YER008C RPS23BP0CX30 145 aa0.85□□□□□ -2.27
SEC3YER008C SNF4P12904 322 aa0.85□□□□□ -2.27
SEC3YER008C YHR125WP38831 101 aa0.85□□□□□ -2.27
SEC3YER008C YEL075CP39972 122 aa0.85□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 37.9 ms