RNA–Protein interactions for RNA: YDR379C-A

SDH6, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeastyeast

Gene SDH6, Length 240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH6YDR379C-A DDR48P18899 430 aaKnown RBP-0.55□□□□□ -2.5
SDH6YDR379C-A CNB1P25296 175 aa-0.55□□□□□ -2.5
SDH6YDR379C-A LDB7P38210 180 aa-0.55□□□□□ -2.5
SDH6YDR379C-A BNA6P43619 295 aa-0.55□□□□□ -2.5
SDH6YDR379C-A APS3P47064 194 aa-0.55□□□□□ -2.5
SDH6YDR379C-A DML1Q03652 475 aa-0.55□□□□□ -2.5
SDH6YDR379C-A GPI17Q04080 534 aa-0.55□□□□□ -2.5
SDH6YDR379C-A AVO2Q04749 426 aa-0.55□□□□□ -2.5
SDH6YDR379C-A YMR321CQ04898 105 aa-0.55□□□□□ -2.5
SDH6YDR379C-A NAT3Q06504 195 aa-0.55□□□□□ -2.5
SDH6YDR379C-A HRD1Q08109 551 aa-0.55□□□□□ -2.5
SDH6YDR379C-A ATG41Q12048 136 aa-0.55□□□□□ -2.5
SDH6YDR379C-A URA2P07259 2214 aaKnown RBP-0.55□□□□□ -2.5
SDH6YDR379C-A RPL24BP24000 155 aaKnown RBP-0.56□□□□□ -2.5
SDH6YDR379C-A ADO1P47143 340 aaKnown RBP-0.56□□□□□ -2.5
SDH6YDR379C-A FMN1Q03778 218 aa-0.56□□□□□ -2.5
SDH6YDR379C-A RNH1Q04740 348 aa-0.56□□□□□ -2.5
SDH6YDR379C-A FUS2Q05670 677 aa-0.56□□□□□ -2.5
SDH6YDR379C-A YLR283WQ05867 314 aa-0.56□□□□□ -2.5
SDH6YDR379C-A DAS2Q12084 232 aa-0.56□□□□□ -2.5
SDH6YDR379C-A MDM32Q12171 622 aa-0.56□□□□□ -2.5
SDH6YDR379C-A RPL28P02406 149 aaKnown RBP-0.57□□□□□ -2.5
SDH6YDR379C-A MER1P16523 270 aa-0.57□□□□□ -2.5
SDH6YDR379C-A NTG1P31378 399 aa-0.57□□□□□ -2.5
SDH6YDR379C-A TAF14P35189 244 aa-0.57□□□□□ -2.5
SDH6YDR379C-A YRA2P36036 203 aaKnown RBP RIP-Chip data-0.57□□□□□ -2.5not detected
SDH6YDR379C-A YBR027CP38220 110 aa-0.57□□□□□ -2.5
SDH6YDR379C-A TRM5P38793 499 aa-0.57□□□□□ -2.5
SDH6YDR379C-A IRC18P47056 224 aa-0.57□□□□□ -2.5
SDH6YDR379C-A GRX5Q02784 150 aa-0.57□□□□□ -2.5
SDH6YDR379C-A SRL4Q03085 281 aa-0.57□□□□□ -2.5
SDH6YDR379C-A YMR315WQ04869 349 aaKnown RBP-0.57□□□□□ -2.5
SDH6YDR379C-A KAP95Q06142 861 aaKnown RBP-0.57□□□□□ -2.5
SDH6YDR379C-A YOL014WQ08110 124 aa-0.57□□□□□ -2.5
SDH6YDR379C-A VAM10Q08474 114 aa-0.57□□□□□ -2.5
SDH6YDR379C-A YML100W-AQ8TGT0 57 aa-0.57□□□□□ -2.5
SDH6YDR379C-A MBF1O14467 151 aaKnown RBP-0.58□□□□□ -2.5
SDH6YDR379C-A FMC1P40491 155 aa-0.58□□□□□ -2.5
SDH6YDR379C-A MVB12P42939 101 aa-0.58□□□□□ -2.5
SDH6YDR379C-A TDA4P47153 279 aa-0.58□□□□□ -2.5
SDH6YDR379C-A YLR036CQ07986 203 aa-0.58□□□□□ -2.5
SDH6YDR379C-A RPS24AP0CX31 135 aaKnown RBP-0.59□□□□□ -2.5
SDH6YDR379C-A RPS24BP0CX32 135 aaKnown RBP-0.59□□□□□ -2.5
SDH6YDR379C-A VMA6P32366 345 aaKnown RBP-0.59□□□□□ -2.5
SDH6YDR379C-A YCR087C-AP37263 153 aa-0.59□□□□□ -2.5
SDH6YDR379C-A RRT1P38192 103 aa-0.59□□□□□ -2.5
SDH6YDR379C-A NSA2P40078 261 aaKnown RBP-0.59□□□□□ -2.5
SDH6YDR379C-A YFL019CP43576 117 aa-0.59□□□□□ -2.5
SDH6YDR379C-A YLR031WQ07978 186 aa-0.59□□□□□ -2.5
SDH6YDR379C-A ATP20Q12233 115 aa-0.59□□□□□ -2.5
SDH6YDR379C-A YOR381W-AQ3E804 55 aa-0.59□□□□□ -2.5
SDH6YDR379C-A TAF2P23255 1407 aa-0.6□□□□□ -2.51
SDH6YDR379C-A MATALPHA1P0CY06 175 aa-0.6□□□□□ -2.51
SDH6YDR379C-A HMLALPHA1P0CY07 175 aa-0.6□□□□□ -2.51
SDH6YDR379C-A PHO13P19881 312 aa-0.6□□□□□ -2.51
SDH6YDR379C-A YMR31P19955 123 aa-0.6□□□□□ -2.51
SDH6YDR379C-A CDC39P25655 2108 aaKnown RBP-0.6□□□□□ -2.51
SDH6YDR379C-A ATG8P38182 117 aaRIP-Chip data-0.6□□□□□ -2.51not detected
SDH6YDR379C-A FMP23P38231 175 aa-0.6□□□□□ -2.51
SDH6YDR379C-A RTR1P40084 226 aaPredicted RBP-0.6□□□□□ -2.51
SDH6YDR379C-A SOL1P50278 321 aa-0.6□□□□□ -2.51
SDH6YDR379C-A YDL157CQ12082 118 aa-0.6□□□□□ -2.51
SDH6YDR379C-A THP2O13539 261 aaKnown RBP-0.61□□□□□ -2.51
SDH6YDR379C-A CDC33P07260 213 aaKnown RBP-0.61□□□□□ -2.51
SDH6YDR379C-A RPS25BP0C0T4 108 aaKnown RBP-0.61□□□□□ -2.51
SDH6YDR379C-A GCY1P14065 312 aaKnown RBP RIP-Chip data-0.61□□□□□ -2.51not detected
SDH6YDR379C-A YCR016WP25617 290 aaKnown RBP-0.61□□□□□ -2.51
SDH6YDR379C-A CAF4P36130 643 aa-0.61□□□□□ -2.51
SDH6YDR379C-A MIC12P38341 106 aa-0.61□□□□□ -2.51
SDH6YDR379C-A GLC8P41818 229 aa-0.61□□□□□ -2.51
SDH6YDR379C-A TMA22P47089 198 aaPredicted RBP-0.61□□□□□ -2.51
SDH6YDR379C-A GEP7P53171 287 aa-0.61□□□□□ -2.51
SDH6YDR379C-A NRK1P53915 240 aa-0.61□□□□□ -2.51
SDH6YDR379C-A RIM9Q04734 239 aa-0.61□□□□□ -2.51
SDH6YDR379C-A RPS25AQ3E792 108 aaPredicted RBP-0.61□□□□□ -2.51
SDH6YDR379C-A RIB3Q99258 208 aa-0.61□□□□□ -2.51
SDH6YDR379C-A MATALPHA2P0CY08 210 aa-0.62□□□□□ -2.51
SDH6YDR379C-A HMLALPHA2P0CY09 210 aa-0.62□□□□□ -2.51
SDH6YDR379C-A RTC3P38804 111 aaPredicted RBP-0.62□□□□□ -2.51
SDH6YDR379C-A NSG1P38837 291 aa-0.62□□□□□ -2.51
SDH6YDR379C-A YGR269WP40326 108 aa-0.62□□□□□ -2.51
SDH6YDR379C-A RFC4P40339 323 aaKnown RBP-0.62□□□□□ -2.51
SDH6YDR379C-A YJL009WP47078 108 aa-0.62□□□□□ -2.51
SDH6YDR379C-A SBH1P52870 82 aa-0.62□□□□□ -2.51
SDH6YDR379C-A PET117Q02771 107 aa-0.62□□□□□ -2.51
SDH6YDR379C-A RUD3Q12234 484 aaKnown RBP-0.62□□□□□ -2.51
SDH6YDR379C-A YLR412C-AQ3E742 68 aa-0.62□□□□□ -2.51
SDH6YDR379C-A COA6Q3E846 104 aa-0.62□□□□□ -2.51
SDH6YDR379C-A HUG1Q6Q5K6 68 aa-0.62□□□□□ -2.51
SDH6YDR379C-A YBR121C-AP0C5L4 52 aa-0.63□□□□□ -2.51
SDH6YDR379C-A HSP30P25619 332 aa-0.63□□□□□ -2.51
SDH6YDR379C-A SPS18P32572 300 aa-0.63□□□□□ -2.51
SDH6YDR379C-A PRP18P33411 251 aaPredicted RBP-0.63□□□□□ -2.51
SDH6YDR379C-A YUH1P35127 236 aa-0.63□□□□□ -2.51
SDH6YDR379C-A YRB1P41920 201 aaKnown RBP-0.63□□□□□ -2.51
SDH6YDR379C-A PAC10P48363 199 aa-0.63□□□□□ -2.51
SDH6YDR379C-A YML079WQ03629 201 aa-0.63□□□□□ -2.51
SDH6YDR379C-A GAL83Q04739 417 aa-0.63□□□□□ -2.51
SDH6YDR379C-A YKL183C-AQ3E765 70 aa-0.63□□□□□ -2.51
SDH6YDR379C-A HSL1P34244 1518 aa-0.64□□□□□ -2.51
Retrieved 100 of 5,963 RNA–protein pairs in 57.4 ms