RNA–Protein interactions for RNA: YDR261W-B

YDR261W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YDR261W-B, Length 5,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261W-BYDR261W-B YDR274CP87283 123 aa2.12□□□□□ -2.07
YDR261W-BYDR261W-B HAL1Q01766 294 aa2.12□□□□□ -2.07
YDR261W-BYDR261W-B Q0144Q9ZZW2 109 aa2.12□□□□□ -2.07
YDR261W-BYDR261W-B NUP157P40064 1391 aaKnown RBP2.12□□□□□ -2.07
YDR261W-BYDR261W-B GON7P46984 123 aa2.12□□□□□ -2.07
YDR261W-BYDR261W-B XPT1P47165 209 aa2.12□□□□□ -2.07
YDR261W-BYDR261W-B ALG9P53868 555 aaKnown RBP2.12□□□□□ -2.07
YDR261W-BYDR261W-B SLM2P53955 656 aa2.12□□□□□ -2.07
YDR261W-BYDR261W-B YTH1Q06102 208 aaPredicted RBP2.12□□□□□ -2.07
YDR261W-BYDR261W-B RPS1BP23248 255 aaKnown RBP2.12□□□□□ -2.07
YDR261W-BYDR261W-B TAF2P23255 1407 aa2.12□□□□□ -2.07
YDR261W-BYDR261W-B LHP1P33399 275 aaKnown RBP2.12□□□□□ -2.07
YDR261W-BYDR261W-B PTC1P35182 281 aa2.12□□□□□ -2.07
YDR261W-BYDR261W-B PBI2P0CT04 75 aaKnown RBP2.11□□□□□ -2.07
YDR261W-BYDR261W-B PRE5P40302 234 aaKnown RBP2.11□□□□□ -2.07
YDR261W-BYDR261W-B BUD13P46947 266 aaPredicted RBP2.11□□□□□ -2.07
YDR261W-BYDR261W-B YNR062CP53748 327 aa2.11□□□□□ -2.07
YDR261W-BYDR261W-B ATP5P09457 212 aa2.11□□□□□ -2.07
YDR261W-BYDR261W-B YHR032W-AP0C5N6 59 aa2.11□□□□□ -2.07
YDR261W-BYDR261W-B CCA1P21269 546 aa2.11□□□□□ -2.07
YDR261W-BYDR261W-B YER084WP40057 128 aa2.11□□□□□ -2.07
YDR261W-BYDR261W-B MEP2P41948 499 aa2.11□□□□□ -2.07
YDR261W-BYDR261W-B CCC1P47818 322 aa2.11□□□□□ -2.07
YDR261W-BYDR261W-B FRQ1Q06389 190 aa2.11□□□□□ -2.07
YDR261W-BYDR261W-B TMC1Q08422 150 aaPredicted RBP2.11□□□□□ -2.07
YDR261W-BYDR261W-B YOR289WQ12012 251 aaPredicted RBP2.11□□□□□ -2.07
YDR261W-BYDR261W-B ATP20Q12233 115 aa2.11□□□□□ -2.07
YDR261W-BYDR261W-B TOP2P06786 1428 aaKnown RBP2.11□□□□□ -2.07
YDR261W-BYDR261W-B HSP26P15992 214 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
YDR261W-BYDR261W-B TIR1P10863 254 aa2.1□□□□□ -2.07
YDR261W-BYDR261W-B MRP49P32388 137 aa2.1□□□□□ -2.07
YDR261W-BYDR261W-B VPS71Q03433 280 aa2.1□□□□□ -2.07
YDR261W-BYDR261W-B YDR102CQ03864 110 aa2.1□□□□□ -2.07
YDR261W-BYDR261W-B KOG1P38873 1557 aa2.1□□□□□ -2.07
YDR261W-BYDR261W-B HHT1P61830 136 aa2.1□□□□□ -2.07
YDR261W-BYDR261W-B PCL1P24867 279 aa2.1□□□□□ -2.07
YDR261W-BYDR261W-B PAN3P36102 679 aaPredicted RBP2.1□□□□□ -2.07
YDR261W-BYDR261W-B YER134CP40081 178 aa2.1□□□□□ -2.07
YDR261W-BYDR261W-B YER188WP40103 239 aa2.1□□□□□ -2.07
YDR261W-BYDR261W-B RUB1Q03919 77 aa2.1□□□□□ -2.07
YDR261W-BYDR261W-B GAL83Q04739 417 aa2.1□□□□□ -2.07
YDR261W-BYDR261W-B BNI1P41832 1953 aa2.1□□□□□ -2.07
YDR261W-BYDR261W-B SHE2P36068 246 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
YDR261W-BYDR261W-B SKG1P36169 355 aa2.1□□□□□ -2.07
YDR261W-BYDR261W-B GVP36P40531 326 aaKnown RBP2.1□□□□□ -2.07
YDR261W-BYDR261W-B RSM27P53305 110 aa2.1□□□□□ -2.07
YDR261W-BYDR261W-B YLR099W-AQ3E798 87 aa2.1□□□□□ -2.07
YDR261W-BYDR261W-B YBT1P32386 1661 aa2.09□□□□□ -2.07
YDR261W-BYDR261W-B AIF1P52923 378 aa2.09□□□□□ -2.07
YDR261W-BYDR261W-B YKR070WP36151 352 aaKnown RBP2.09□□□□□ -2.07
YDR261W-BYDR261W-B DOC1P53068 250 aa2.09□□□□□ -2.07
YDR261W-BYDR261W-B PHO85P17157 305 aa2.09□□□□□ -2.08
YDR261W-BYDR261W-B RPL14AP36105 138 aaKnown RBP2.09□□□□□ -2.08
YDR261W-BYDR261W-B RPL14BP38754 138 aaKnown RBP2.09□□□□□ -2.08
YDR261W-BYDR261W-B HPM1P40481 377 aa2.09□□□□□ -2.08
YDR261W-BYDR261W-B APS3P47064 194 aa2.09□□□□□ -2.08
YDR261W-BYDR261W-B YOR214CQ12282 236 aa2.09□□□□□ -2.08
YDR261W-BYDR261W-B ESC1Q03661 1658 aaKnown RBP2.09□□□□□ -2.08
YDR261W-BYDR261W-B YOR304C-AO14468 76 aa2.09□□□□□ -2.08
YDR261W-BYDR261W-B POR1P04840 283 aaKnown RBP2.09□□□□□ -2.08
YDR261W-BYDR261W-B YEL045CP32616 141 aa2.09□□□□□ -2.08
YDR261W-BYDR261W-B FCY21P40039 528 aa2.09□□□□□ -2.08
YDR261W-BYDR261W-B YMR099CQ03161 297 aaKnown RBP2.09□□□□□ -2.08
YDR261W-BYDR261W-B IES3Q12345 250 aa2.09□□□□□ -2.08
YDR261W-BYDR261W-B MYO2P19524 1574 aaKnown RBP2.08□□□□□ -2.08
YDR261W-BYDR261W-B SHB17P36136 271 aaKnown RBP2.08□□□□□ -2.08
YDR261W-BYDR261W-B MLP2P40457 1679 aa2.08□□□□□ -2.08
YDR261W-BYDR261W-B FKS1P38631 1876 aaKnown RBP2.08□□□□□ -2.08
YDR261W-BYDR261W-B ADH3P07246 375 aaKnown RBP2.08□□□□□ -2.08
YDR261W-BYDR261W-B YPT53P36019 220 aa2.08□□□□□ -2.08
YDR261W-BYDR261W-B YHR180WP38868 163 aa2.08□□□□□ -2.08
YDR261W-BYDR261W-B AIM2P39721 246 aa2.08□□□□□ -2.08
YDR261W-BYDR261W-B ATP14Q12349 124 aa2.08□□□□□ -2.08
YDR261W-BYDR261W-B CPA1P07258 411 aaKnown RBP2.08□□□□□ -2.08
YDR261W-BYDR261W-B RPS20P38701 121 aaKnown RBP2.08□□□□□ -2.08
YDR261W-BYDR261W-B ERJ5P43613 295 aaPredicted RBP2.08□□□□□ -2.08
YDR261W-BYDR261W-B RPS19AP07280 144 aaKnown RBP2.08□□□□□ -2.08
YDR261W-BYDR261W-B RPS19BP07281 144 aaPredicted RBP2.08□□□□□ -2.08
YDR261W-BYDR261W-B VMA11P32842 164 aa2.08□□□□□ -2.08
YDR261W-BYDR261W-B YBR220CP38318 560 aa2.08□□□□□ -2.08
YDR261W-BYDR261W-B SNT2P53127 1403 aa2.08□□□□□ -2.08
YDR261W-BYDR261W-B ULS1Q08562 1619 aa2.07□□□□□ -2.08
YDR261W-BYDR261W-B RPC19P28000 142 aaKnown RBP2.07□□□□□ -2.08
YDR261W-BYDR261W-B YDR366CP87287 132 aa2.07□□□□□ -2.08
YDR261W-BYDR261W-B YHR140WP38842 239 aa2.07□□□□□ -2.08
YDR261W-BYDR261W-B NKP2Q06162 153 aa2.07□□□□□ -2.08
YDR261W-BYDR261W-B CNL1Q06333 122 aa2.07□□□□□ -2.08
YDR261W-BYDR261W-B DUR1,2P32528 1835 aaKnown RBP2.07□□□□□ -2.08
YDR261W-BYDR261W-B RPS23AP0CX29 145 aaKnown RBP2.07□□□□□ -2.08
YDR261W-BYDR261W-B RPS23BP0CX30 145 aa2.07□□□□□ -2.08
YDR261W-BYDR261W-B DDR48P18899 430 aaKnown RBP2.07□□□□□ -2.08
YDR261W-BYDR261W-B PHO13P19881 312 aa2.07□□□□□ -2.08
YDR261W-BYDR261W-B MRS4P23500 304 aa2.07□□□□□ -2.08
YDR261W-BYDR261W-B UTH1P36135 365 aa2.07□□□□□ -2.08
YDR261W-BYDR261W-B MRPL24P36525 258 aaPredicted RBP2.07□□□□□ -2.08
YDR261W-BYDR261W-B AVT2P39981 480 aa2.07□□□□□ -2.08
YDR261W-BYDR261W-B AYR1P40471 297 aa2.07□□□□□ -2.08
YDR261W-BYDR261W-B SAS5Q99314 248 aa2.07□□□□□ -2.08
YDR261W-BYDR261W-B IRC20Q06554 1556 aa2.07□□□□□ -2.08
YDR261W-BYDR261W-B PGD1P40356 397 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 55.1 ms