RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C TMA23Q03525 211 aa0.32□□□□□ -2.36
SNU56YDR240C ELP6Q04868 273 aa0.32□□□□□ -2.36
SNU56YDR240C MAK31P23059 88 aa0.31□□□□□ -2.36
SNU56YDR240C PIR1Q03178 341 aa0.31□□□□□ -2.36
SNU56YDR240C YKR070WP36151 352 aaKnown RBP0.3□□□□□ -2.36
SNU56YDR240C NSE4P43124 402 aa0.3□□□□□ -2.36
SNU56YDR240C YFL019CP43576 117 aa0.3□□□□□ -2.36
SNU56YDR240C GRX5Q02784 150 aa0.3□□□□□ -2.36
SNU56YDR240C YHP1Q04116 353 aa0.3□□□□□ -2.36
SNU56YDR240C NTG1P31378 399 aa0.29□□□□□ -2.36
SNU56YDR240C YDC1Q02896 317 aa0.29□□□□□ -2.36
SNU56YDR240C KEI1Q06346 221 aa0.29□□□□□ -2.36
SNU56YDR240C PRM3Q08931 133 aa0.29□□□□□ -2.36
SNU56YDR240C DAS2Q12084 232 aa0.29□□□□□ -2.36
SNU56YDR240C HTB1P02293 131 aaKnown RBP0.29□□□□□ -2.36
SNU56YDR240C HTB2P02294 131 aa0.29□□□□□ -2.36
SNU56YDR240C NSA2P40078 261 aaKnown RBP0.29□□□□□ -2.36
SNU56YDR240C YNL184CP53876 108 aa0.29□□□□□ -2.36
SNU56YDR240C PGA2P53903 129 aa0.29□□□□□ -2.36
SNU56YDR240C NRK1P53915 240 aa0.29□□□□□ -2.36
SNU56YDR240C UPS1Q05776 175 aa0.29□□□□□ -2.36
SNU56YDR240C YOR342CQ12182 319 aa0.29□□□□□ -2.36
SNU56YDR240C YLR412C-AQ3E742 68 aa0.29□□□□□ -2.36
SNU56YDR240C GPI14P47088 403 aaKnown RBP0.28□□□□□ -2.37
SNU56YDR240C MMS2P53152 137 aa0.28□□□□□ -2.37
SNU56YDR240C DML1Q03652 475 aa0.28□□□□□ -2.37
SNU56YDR240C RUD3Q12234 484 aaKnown RBP0.28□□□□□ -2.37
SNU56YDR240C YGL230CP53074 147 aa0.27□□□□□ -2.37
SNU56YDR240C ATP20Q12233 115 aa0.27□□□□□ -2.37
SNU56YDR240C YBR056W-AI2HB52 66 aa0.26□□□□□ -2.37
SNU56YDR240C NSG1P38837 291 aa0.26□□□□□ -2.37
SNU56YDR240C CCS1P40202 249 aaKnown RBP0.26□□□□□ -2.37
SNU56YDR240C HHT1P61830 136 aa0.26□□□□□ -2.37
SNU56YDR240C YRA2P36036 203 aaKnown RBP RIP-Chip data0.25□□□□□ -2.37not detected
SNU56YDR240C SHB17P36136 271 aaKnown RBP0.25□□□□□ -2.37
SNU56YDR240C RRT1P38192 103 aa0.25□□□□□ -2.37
SNU56YDR240C ATG41Q12048 136 aa0.25□□□□□ -2.37
SNU56YDR240C YHR213W-BQ8TGK1 99 aa0.25□□□□□ -2.37
SNU56YDR240C YOL013W-AP0C272 63 aaPredicted RBP0.24□□□□□ -2.37
SNU56YDR240C YCR001WP25347 104 aa0.24□□□□□ -2.37
SNU56YDR240C PRE1P22141 198 aaKnown RBP0.23□□□□□ -2.37
SNU56YDR240C CDC39P25655 2108 aaKnown RBP0.23□□□□□ -2.37
SNU56YDR240C MRPS17Q03246 237 aaPredicted RBP0.23□□□□□ -2.37
SNU56YDR240C YPR014CQ6B0W2 109 aa0.23□□□□□ -2.37
SNU56YDR240C IGO2Q9P305 131 aa0.23□□□□□ -2.37
SNU56YDR240C ARG80P07249 177 aa0.22□□□□□ -2.37
SNU56YDR240C HHY1P39982 102 aa0.22□□□□□ -2.37
SNU56YDR240C RTC4P53850 401 aa0.22□□□□□ -2.37
SNU56YDR240C PGA1P53896 198 aa0.22□□□□□ -2.37
SNU56YDR240C YCL012CQ8J0M4 134 aa0.22□□□□□ -2.37
SNU56YDR240C ARO80Q04052 950 aa0.22□□□□□ -2.37
SNU56YDR240C YOR381W-AQ3E804 55 aa0.22□□□□□ -2.37
SNU56YDR240C SBH1P52870 82 aa0.21□□□□□ -2.38
SNU56YDR240C YDL085C-AQ3E7B7 68 aaKnown RBP0.21□□□□□ -2.38
SNU56YDR240C ADE1P27616 306 aa0.2□□□□□ -2.38
SNU56YDR240C YOL024WQ08172 172 aa0.2□□□□□ -2.38
SNU56YDR240C GCY1P14065 312 aaKnown RBP RIP-Chip data0.19□□□□□ -2.38not detected
SNU56YDR240C GAL83Q04739 417 aa0.19□□□□□ -2.38
SNU56YDR240C GIS3Q12418 502 aa0.19□□□□□ -2.38
SNU56YDR240C CBF1P17106 351 aa0.18□□□□□ -2.38
SNU56YDR240C HSP30P25619 332 aa0.18□□□□□ -2.38
SNU56YDR240C POG1P40473 351 aa0.18□□□□□ -2.38
SNU56YDR240C FCY1Q12178 158 aa0.18□□□□□ -2.38
SNU56YDR240C MPD1Q12404 318 aaKnown RBP0.18□□□□□ -2.38
SNU56YDR240C QCR7P00128 127 aa0.17□□□□□ -2.38
SNU56YDR240C KIN28P06242 306 aa0.17□□□□□ -2.38
SNU56YDR240C APS3P47064 194 aa0.17□□□□□ -2.38
SNU56YDR240C RIM9Q04734 239 aa0.17□□□□□ -2.38
SNU56YDR240C YKR005CQ02203 525 aa0.16□□□□□ -2.38
SNU56YDR240C LAA1P39526 2014 aa0.16□□□□□ -2.38
SNU56YDR240C MATALPHA2P0CY08 210 aa0.16□□□□□ -2.38
SNU56YDR240C HMLALPHA2P0CY09 210 aa0.16□□□□□ -2.38
SNU56YDR240C PTC1P35182 281 aa0.16□□□□□ -2.38
SNU56YDR240C CLG1P35190 452 aa0.16□□□□□ -2.38
SNU56YDR240C CIN5P40917 295 aa0.16□□□□□ -2.38
SNU56YDR240C PAC10P48363 199 aa0.16□□□□□ -2.38
SNU56YDR240C VPS28Q02767 242 aa0.16□□□□□ -2.38
SNU56YDR240C AVO2Q04749 426 aa0.16□□□□□ -2.38
SNU56YDR240C BLM10P43583 2143 aa0.15□□□□□ -2.39
SNU56YDR240C RPB4P20433 221 aaPredicted RBP0.15□□□□□ -2.39
SNU56YDR240C MOB1P40484 314 aa0.15□□□□□ -2.39
SNU56YDR240C FMP32P43557 207 aa0.15□□□□□ -2.39
SNU56YDR240C AIM34Q03673 198 aa0.15□□□□□ -2.39
SNU56YDR240C SEC14P24280 304 aaKnown RBP0.14□□□□□ -2.39
SNU56YDR240C YML079WQ03629 201 aa0.14□□□□□ -2.39
SNU56YDR240C GPI17Q04080 534 aa0.14□□□□□ -2.39
SNU56YDR240C YDL157CQ12082 118 aa0.14□□□□□ -2.39
SNU56YDR240C FYV4P38783 130 aaPredicted RBP0.13□□□□□ -2.39
SNU56YDR240C YNL200CP40165 246 aaKnown RBP0.13□□□□□ -2.39
SNU56YDR240C YGR269WP40326 108 aa0.13□□□□□ -2.39
SNU56YDR240C YPR127WQ06494 345 aa0.13□□□□□ -2.39
SNU56YDR240C RPS25BP0C0T4 108 aaKnown RBP0.12□□□□□ -2.39
SNU56YDR240C TAH1P25638 111 aaPredicted RBP0.12□□□□□ -2.39
SNU56YDR240C AHC2P25649 128 aa0.12□□□□□ -2.39
SNU56YDR240C RNH1Q04740 348 aa0.12□□□□□ -2.39
SNU56YDR240C YOR072WQ08486 104 aa0.12□□□□□ -2.39
SNU56YDR240C YOR214CQ12282 236 aa0.12□□□□□ -2.39
SNU56YDR240C RPS25AQ3E792 108 aaPredicted RBP0.12□□□□□ -2.39
SNU56YDR240C NQM1P53228 333 aaPredicted RBP0.11□□□□□ -2.39
SNU56YDR240C VAM10Q08474 114 aa0.11□□□□□ -2.39
Retrieved 100 of 5,963 RNA–protein pairs in 67.6 ms