RNA–Protein interactions for RNA: YDR182W

CDC1, Transcript of Putative lipid phosphatase of the endoplasmic reticulum, yeast

Gene CDC1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC1	YDR182W	PHO92	Q06390	306 aa		4.92	□□□□□ -1.62
CDC1	YDR182W	RXT3	Q07458	294 aa		4.92	□□□□□ -1.62
CDC1	YDR182W	YGL258W-A	Q3E740	77 aa		4.92	□□□□□ -1.62
CDC1	YDR182W	COX2	P00410	251 aa		4.91	□□□□□ -1.62
CDC1	YDR182W	YPI1	P43587	155 aa		4.91	□□□□□ -1.62
CDC1	YDR182W	NIF3	P53081	288 aa		4.91	□□□□□ -1.62
CDC1	YDR182W	YGR050C	P53231	118 aa		4.91	□□□□□ -1.62
CDC1	YDR182W	ERV25	P54837	211 aa	Known RBP	4.91	□□□□□ -1.62
CDC1	YDR182W	LRS4	Q04087	347 aa	Known RBP	4.91	□□□□□ -1.62
CDC1	YDR182W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
CDC1	YDR182W	TPI1	P00942	248 aa	Known RBP	4.9	□□□□□ -1.62
CDC1	YDR182W	UTP11	P34247	250 aa	Predicted RBP	4.9	□□□□□ -1.62
CDC1	YDR182W	NRG2	P38082	220 aa		4.9	□□□□□ -1.62
CDC1	YDR182W	DOG2	P38773	246 aa		4.9	□□□□□ -1.62
CDC1	YDR182W	DOG1	P38774	246 aa		4.9	□□□□□ -1.62
CDC1	YDR182W	MST28	P39552	234 aa		4.9	□□□□□ -1.62
CDC1	YDR182W	MST27	P53176	234 aa		4.9	□□□□□ -1.62
CDC1	YDR182W	SMX3	P54999	86 aa	Predicted RBP	4.9	□□□□□ -1.62
CDC1	YDR182W	TRI1	Q05024	226 aa		4.9	□□□□□ -1.62
CDC1	YDR182W	GEP3	Q08622	556 aa		4.9	□□□□□ -1.62
CDC1	YDR182W	PAA1	Q12447	191 aa	Known RBP	4.9	□□□□□ -1.62
CDC1	YDR182W	MRS3	P10566	314 aa		4.89	□□□□□ -1.63
CDC1	YDR182W	YCR016W	P25617	290 aa	Known RBP	4.89	□□□□□ -1.63
CDC1	YDR182W	ALK2	P32789	676 aa	Predicted RBP	4.89	□□□□□ -1.63
CDC1	YDR182W	CDS1	P38221	457 aa		4.89	□□□□□ -1.63
CDC1	YDR182W	WSS1	P38838	269 aa		4.89	□□□□□ -1.63
CDC1	YDR182W	NSA2	P40078	261 aa	Known RBP	4.89	□□□□□ -1.63
CDC1	YDR182W	SIM1	P40472	476 aa		4.89	□□□□□ -1.63
CDC1	YDR182W	MSO1	P53604	210 aa	Known RBP	4.89	□□□□□ -1.63
CDC1	YDR182W	RAD28	Q12021	506 aa		4.89	□□□□□ -1.63
CDC1	YDR182W	YCT1	Q12235	531 aa		4.89	□□□□□ -1.63
CDC1	YDR182W	TRM13	Q12383	476 aa		4.89	□□□□□ -1.63
CDC1	YDR182W	CYC3	P06182	269 aa		4.88	□□□□□ -1.63
CDC1	YDR182W	SPS2	P08459	502 aa		4.88	□□□□□ -1.63
CDC1	YDR182W	MRP17	P28778	131 aa		4.88	□□□□□ -1.63
CDC1	YDR182W	SRL3	P36167	246 aa		4.88	□□□□□ -1.63
CDC1	YDR182W	SIT1	P39980	628 aa		4.88	□□□□□ -1.63
CDC1	YDR182W	TAL1	P15019	335 aa	Known RBP	4.88	□□□□□ -1.63
CDC1	YDR182W	SUA5	P32579	426 aa		4.88	□□□□□ -1.63
CDC1	YDR182W	YBL071C	P38185	102 aa		4.88	□□□□□ -1.63
CDC1	YDR182W	RRT1	P38192	103 aa		4.88	□□□□□ -1.63
CDC1	YDR182W	YLR224W	Q05947	369 aa		4.88	□□□□□ -1.63
CDC1	YDR182W	RRG8	Q06109	277 aa		4.88	□□□□□ -1.63
CDC1	YDR182W	ATG39	Q06159	398 aa		4.88	□□□□□ -1.63
CDC1	YDR182W	ENV7	Q12003	364 aa		4.88	□□□□□ -1.63
CDC1	YDR182W	POC4	Q12245	148 aa	Predicted RBP	4.88	□□□□□ -1.63
CDC1	YDR182W	AGC1	Q12482	902 aa		4.88	□□□□□ -1.63
CDC1	YDR182W	TFB5	Q3E7C1	72 aa	Predicted RBP	4.88	□□□□□ -1.63
CDC1	YDR182W	AFR1	P33304	620 aa		4.87	□□□□□ -1.63
CDC1	YDR182W	YKL162C	P36052	402 aa		4.87	□□□□□ -1.63
CDC1	YDR182W	YKE4	P40544	346 aa		4.87	□□□□□ -1.63
CDC1	YDR182W	AGX1	P43567	385 aa		4.87	□□□□□ -1.63
CDC1	YDR182W	ARO8	P53090	500 aa	Known RBP	4.87	□□□□□ -1.63
CDC1	YDR182W	GPG1	P53130	126 aa		4.87	□□□□□ -1.63
CDC1	YDR182W	FRQ1	Q06389	190 aa		4.87	□□□□□ -1.63
CDC1	YDR182W	TIM18	Q08749	192 aa		4.87	□□□□□ -1.63
CDC1	YDR182W	USV1	Q12132	391 aa		4.87	□□□□□ -1.63
CDC1	YDR182W	NHP6B	P11633	99 aa	Known RBP	4.86	□□□□□ -1.63
CDC1	YDR182W	MRPL3	P36516	390 aa		4.86	□□□□□ -1.63
CDC1	YDR182W	YIR035C	P40579	254 aa		4.86	□□□□□ -1.63
CDC1	YDR182W	YGR018C	P53211	109 aa		4.86	□□□□□ -1.63
CDC1	YDR182W	HCH1	P53834	153 aa		4.86	□□□□□ -1.63
CDC1	YDR182W	FCY2	P17064	533 aa		4.85	□□□□□ -1.63
CDC1	YDR182W	SEC22	P22214	214 aa		4.85	□□□□□ -1.63
CDC1	YDR182W	POR2	P40478	281 aa		4.85	□□□□□ -1.63
CDC1	YDR182W	ALG13	P53178	202 aa		4.85	□□□□□ -1.63
CDC1	YDR182W	OCA2	P53949	197 aa		4.85	□□□□□ -1.63
CDC1	YDR182W	AIM45	Q12480	344 aa	Known RBP	4.85	□□□□□ -1.63
CDC1	YDR182W	COA2	Q3E823	68 aa		4.85	□□□□□ -1.63
CDC1	YDR182W	YCR022C	P25620	114 aa		4.84	□□□□□ -1.63
CDC1	YDR182W	TIP1	P27654	210 aa	Predicted RBP	4.84	□□□□□ -1.63
CDC1	YDR182W	AVT5	P38176	459 aa		4.84	□□□□□ -1.63
CDC1	YDR182W	YBR242W	P38331	238 aa		4.84	□□□□□ -1.63
CDC1	YDR182W	HXT14	P42833	540 aa		4.84	□□□□□ -1.63
CDC1	YDR182W	YJL027C	P47063	138 aa	Predicted RBP	4.84	□□□□□ -1.63
CDC1	YDR182W	TDA4	P47153	279 aa		4.84	□□□□□ -1.63
CDC1	YDR182W	MIC26	P50087	233 aa		4.84	□□□□□ -1.63
CDC1	YDR182W	YGR025W	P53216	100 aa		4.84	□□□□□ -1.63
CDC1	YDR182W	DCS1	Q06151	350 aa		4.84	□□□□□ -1.63
CDC1	YDR182W	RDS3	Q06835	107 aa	Predicted RBP	4.84	□□□□□ -1.63
CDC1	YDR182W	POS5	Q06892	414 aa		4.84	□□□□□ -1.63
CDC1	YDR182W	RRT7	Q07829	113 aa		4.84	□□□□□ -1.63
CDC1	YDR182W	YPS3	Q12303	508 aa		4.84	□□□□□ -1.63
CDC1	YDR182W	RTC3	P38804	111 aa	Predicted RBP	4.83	□□□□□ -1.64
CDC1	YDR182W	BDH1	P39714	382 aa		4.83	□□□□□ -1.64
CDC1	YDR182W	CAF16	P43569	289 aa		4.83	□□□□□ -1.64
CDC1	YDR182W	YAP1802	P53309	568 aa		4.83	□□□□□ -1.64
CDC1	YDR182W	YIF1	P53845	314 aa	Known RBP	4.83	□□□□□ -1.64
CDC1	YDR182W	FYV6	P53913	173 aa		4.83	□□□□□ -1.64
CDC1	YDR182W	YMR090W	Q04304	227 aa	Known RBP	4.83	□□□□□ -1.64
CDC1	YDR182W	YPL264C	Q08980	353 aa		4.83	□□□□□ -1.64
CDC1	YDR182W	POP5	P28005	173 aa		4.82	□□□□□ -1.64
CDC1	YDR182W	PPQ1	P32945	549 aa		4.82	□□□□□ -1.64
CDC1	YDR182W	RRF1	P38771	230 aa		4.82	□□□□□ -1.64
CDC1	YDR182W	RTS2	P40962	232 aa		4.82	□□□□□ -1.64
CDC1	YDR182W	LST7	P53237	242 aa		4.82	□□□□□ -1.64
CDC1	YDR182W	YOR011W-A	Q3E807	68 aa		4.82	□□□□□ -1.64
CDC1	YDR182W	YMR316C-A	I2HB70	103 aa		4.81	□□□□□ -1.64
CDC1	YDR182W	PIS1	P06197	220 aa	Known RBP	4.81	□□□□□ -1.64
CDC1	YDR182W	ARG80	P07249	177 aa		4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 60.2 ms