RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W REX3Q12090 404 aa3.53□□□□□ -1.84
HSP42YDR171W YCL021W-AQ96VH3 125 aa3.53□□□□□ -1.84
HSP42YDR171W YPR170W-BP0C5R9 85 aa3.52□□□□□ -1.85
HSP42YDR171W YKR104WP0CE69 306 aa3.52□□□□□ -1.85
HSP42YDR171W DDI2P0CH63 225 aa3.52□□□□□ -1.85
HSP42YDR171W DDI3P0CH64 225 aa3.52□□□□□ -1.85
HSP42YDR171W URA5P13298 226 aaKnown RBP3.52□□□□□ -1.85
HSP42YDR171W GLC7P32598 312 aaKnown RBP3.52□□□□□ -1.85
HSP42YDR171W RML2P32611 393 aa3.52□□□□□ -1.85
HSP42YDR171W REC114P32841 428 aa3.52□□□□□ -1.85
HSP42YDR171W PAD1P33751 242 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
HSP42YDR171W TTI2P47168 421 aa3.52□□□□□ -1.85
HSP42YDR171W TRM9P49957 279 aa3.52□□□□□ -1.85
HSP42YDR171W RPN14P53196 417 aa3.52□□□□□ -1.85
HSP42YDR171W THG1P53215 237 aaKnown RBP3.52□□□□□ -1.85
HSP42YDR171W RNH201P53942 307 aa3.52□□□□□ -1.85
HSP42YDR171W RHO3Q00245 231 aaKnown RBP3.52□□□□□ -1.85
HSP42YDR171W YMR166CQ03829 368 aa3.52□□□□□ -1.85
HSP42YDR171W MSC3Q05812 728 aa3.52□□□□□ -1.85
HSP42YDR171W CSI2Q08054 341 aa3.52□□□□□ -1.85
HSP42YDR171W BSC6Q08280 497 aa3.52□□□□□ -1.85
HSP42YDR171W YPL257WQ08974 193 aa3.52□□□□□ -1.85
HSP42YDR171W ERV2Q12284 196 aa3.52□□□□□ -1.85
HSP42YDR171W PRR2Q12310 699 aa3.52□□□□□ -1.85
HSP42YDR171W HUT1Q12520 339 aa3.52□□□□□ -1.85
HSP42YDR171W BRR2P32639 2163 aaKnown RBP3.52□□□□□ -1.85
HSP42YDR171W FMP49A0A023PZB3 126 aa3.51□□□□□ -1.85
HSP42YDR171W COX2P00410 251 aa3.51□□□□□ -1.85
HSP42YDR171W POR1P04840 283 aaKnown RBP3.51□□□□□ -1.85
HSP42YDR171W RPI1P23250 407 aaKnown RBP3.51□□□□□ -1.85
HSP42YDR171W AHT1P29589 182 aa3.51□□□□□ -1.85
HSP42YDR171W TRM7P38238 310 aaKnown RBP3.51□□□□□ -1.85
HSP42YDR171W RPF1P38805 295 aaKnown RBP3.51□□□□□ -1.85
HSP42YDR171W YER188WP40103 239 aa3.51□□□□□ -1.85
HSP42YDR171W XPT1P47165 209 aa3.51□□□□□ -1.85
HSP42YDR171W MIC26P50087 233 aa3.51□□□□□ -1.85
HSP42YDR171W LST7P53237 242 aa3.51□□□□□ -1.85
HSP42YDR171W MSO1P53604 210 aaKnown RBP3.51□□□□□ -1.85
HSP42YDR171W DAD3P69850 94 aa3.51□□□□□ -1.85
HSP42YDR171W PKR1Q03880 122 aaKnown RBP3.51□□□□□ -1.85
HSP42YDR171W ATG10Q07879 167 aa3.51□□□□□ -1.85
HSP42YDR171W YOL024WQ08172 172 aa3.51□□□□□ -1.85
HSP42YDR171W YOL029CQ08187 201 aa3.51□□□□□ -1.85
HSP42YDR171W HRT1Q08273 121 aa3.51□□□□□ -1.85
HSP42YDR171W VPS68Q12016 184 aa3.51□□□□□ -1.85
HSP42YDR171W TPT1Q12272 230 aaKnown RBP3.51□□□□□ -1.85
HSP42YDR171W COA2Q3E823 68 aa3.51□□□□□ -1.85
HSP42YDR171W OPI3P05375 206 aa3.5□□□□□ -1.85
HSP42YDR171W RPS22AP0C0W1 130 aaKnown RBP3.5□□□□□ -1.85
HSP42YDR171W ANB1P19211 157 aa3.5□□□□□ -1.85
HSP42YDR171W QCR9P22289 66 aa3.5□□□□□ -1.85
HSP42YDR171W SPO13P23624 291 aa3.5□□□□□ -1.85
HSP42YDR171W YCR025CP25352 136 aa3.5□□□□□ -1.85
HSP42YDR171W MRP49P32388 137 aa3.5□□□□□ -1.85
HSP42YDR171W SPS18P32572 300 aa3.5□□□□□ -1.85
HSP42YDR171W SHB17P36136 271 aaKnown RBP3.5□□□□□ -1.85
HSP42YDR171W FRM2P37261 193 aa3.5□□□□□ -1.85
HSP42YDR171W MNL1P38888 796 aa3.5□□□□□ -1.85
HSP42YDR171W YIL089WP40500 205 aa3.5□□□□□ -1.85
HSP42YDR171W GPI2P46961 280 aa3.5□□□□□ -1.85
HSP42YDR171W YIP1P53039 248 aa3.5□□□□□ -1.85
HSP42YDR171W PET191Q02772 108 aa3.5□□□□□ -1.85
HSP42YDR171W INP1Q03694 420 aa3.5□□□□□ -1.85
HSP42YDR171W UPS3Q04006 179 aa3.5□□□□□ -1.85
HSP42YDR171W SCW10Q04951 389 aa3.5□□□□□ -1.85
HSP42YDR171W HNT3Q08702 217 aa3.5□□□□□ -1.85
HSP42YDR171W YDL157CQ12082 118 aa3.5□□□□□ -1.85
HSP42YDR171W ATG40Q99325 256 aa3.5□□□□□ -1.85
HSP42YDR171W POL2P21951 2222 aaKnown RBP3.5□□□□□ -1.85
HSP42YDR171W FLO9P39712 1322 aa3.49□□□□□ -1.85
HSP42YDR171W FAS1P07149 2051 aaKnown RBP3.49□□□□□ -1.85
HSP42YDR171W SAL1D6W196 494 aa3.49□□□□□ -1.85
HSP42YDR171W STE18P18852 110 aa3.49□□□□□ -1.85
HSP42YDR171W DAL82P21705 255 aa3.49□□□□□ -1.85
HSP42YDR171W CPR2P23285 205 aa3.49□□□□□ -1.85
HSP42YDR171W MRS4P23500 304 aa3.49□□□□□ -1.85
HSP42YDR171W SCO1P23833 295 aa3.49□□□□□ -1.85
HSP42YDR171W MEK1P24719 497 aaPredicted RBP3.49□□□□□ -1.85
HSP42YDR171W YGL010WP25338 174 aa3.49□□□□□ -1.85
HSP42YDR171W ERV1P27882 189 aa3.49□□□□□ -1.85
HSP42YDR171W ARO2P28777 376 aaKnown RBP3.49□□□□□ -1.85
HSP42YDR171W ERG2P32352 222 aa3.49□□□□□ -1.85
HSP42YDR171W AGA2P32781 87 aa3.49□□□□□ -1.85
HSP42YDR171W PRY2P36110 329 aa3.49□□□□□ -1.85
HSP42YDR171W DAD2P36162 133 aa3.49□□□□□ -1.85
HSP42YDR171W FYV4P38783 130 aaPredicted RBP3.49□□□□□ -1.85
HSP42YDR171W YAL037WP39728 267 aa3.49□□□□□ -1.85
HSP42YDR171W ZIM17P42844 174 aa3.49□□□□□ -1.85
HSP42YDR171W RPA43P46669 326 aa3.49□□□□□ -1.85
HSP42YDR171W BOR1P53838 576 aa3.49□□□□□ -1.85
HSP42YDR171W YPL077CQ02831 240 aa3.49□□□□□ -1.85
HSP42YDR171W GIM5Q04493 163 aa3.49□□□□□ -1.85
HSP42YDR171W HRI1Q05905 244 aaKnown RBP3.49□□□□□ -1.85
HSP42YDR171W LOA1Q06508 300 aa3.49□□□□□ -1.85
HSP42YDR171W YPL264CQ08980 353 aa3.49□□□□□ -1.85
HSP42YDR171W YPL162CQ12042 273 aa3.49□□□□□ -1.85
HSP42YDR171W MCP1Q12106 302 aa3.49□□□□□ -1.85
HSP42YDR171W FRE8Q12209 686 aa3.49□□□□□ -1.85
HSP42YDR171W RPS22BQ3E7Y3 130 aaKnown RBP3.49□□□□□ -1.85
HSP42YDR171W YLR365WQ7LIF2 110 aa3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms