RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C AHC2P25649 128 aa0.68□□□□□ -2.3
SWI5YDR146C CAF4P36130 643 aa0.68□□□□□ -2.3
SWI5YDR146C SHG1P38337 142 aa0.68□□□□□ -2.3
SWI5YDR146C FMP32P43557 207 aa0.68□□□□□ -2.3
SWI5YDR146C DIG2Q03373 323 aaKnown RBP0.68□□□□□ -2.3
SWI5YDR146C DAS2Q12084 232 aa0.68□□□□□ -2.3
SWI5YDR146C DGK1Q12382 290 aa0.68□□□□□ -2.3
SWI5YDR146C RPS24AP0CX31 135 aaKnown RBP0.68□□□□□ -2.3
SWI5YDR146C RPS24BP0CX32 135 aaKnown RBP0.68□□□□□ -2.3
SWI5YDR146C GSP2P32836 220 aaKnown RBP0.68□□□□□ -2.3
SWI5YDR146C FYV4P38783 130 aaPredicted RBP0.68□□□□□ -2.3
SWI5YDR146C JAC1P53193 184 aa0.68□□□□□ -2.3
SWI5YDR146C SNO1Q03144 224 aa0.68□□□□□ -2.3
SWI5YDR146C AIM34Q03673 198 aa0.68□□□□□ -2.3
SWI5YDR146C UPS3Q04006 179 aa0.68□□□□□ -2.3
SWI5YDR146C LCL2Q08045 131 aa0.68□□□□□ -2.3
SWI5YDR146C FYV12Q08559 129 aa0.68□□□□□ -2.3
SWI5YDR146C TAR1Q8TGM6 124 aa0.68□□□□□ -2.3
SWI5YDR146C YCR023CP25351 611 aa0.67□□□□□ -2.3
SWI5YDR146C UBC8P28263 218 aa0.67□□□□□ -2.3
SWI5YDR146C MAK5P38112 773 aaPredicted RBP0.67□□□□□ -2.3
SWI5YDR146C RRT1P38192 103 aa0.67□□□□□ -2.3
SWI5YDR146C YBR242WP38331 238 aa0.67□□□□□ -2.3
SWI5YDR146C NSA2P40078 261 aaKnown RBP0.67□□□□□ -2.3
SWI5YDR146C NSE4P43124 402 aa0.67□□□□□ -2.3
SWI5YDR146C RPL37AP49166 88 aaKnown RBP0.67□□□□□ -2.3
SWI5YDR146C YMR007WQ03675 126 aa0.67□□□□□ -2.3
SWI5YDR146C RRP17Q04031 235 aaPredicted RBP0.67□□□□□ -2.3
SWI5YDR146C GPI17Q04080 534 aa0.67□□□□□ -2.3
SWI5YDR146C YPR203WQ08994 102 aa0.67□□□□□ -2.3
SWI5YDR146C YOR015WQ12169 119 aa0.67□□□□□ -2.3
SWI5YDR146C YOR381W-AQ3E804 55 aa0.67□□□□□ -2.3
SWI5YDR146C YPR014CQ6B0W2 109 aa0.67□□□□□ -2.3
SWI5YDR146C DUR1,2P32528 1835 aaKnown RBP0.67□□□□□ -2.3
SWI5YDR146C GCY1P14065 312 aaKnown RBP RIP-Chip data0.67□□□□□ -2.3not detected
SWI5YDR146C TRX3P25372 127 aa0.67□□□□□ -2.3
SWI5YDR146C YKL102CP34249 101 aa0.67□□□□□ -2.3
SWI5YDR146C NVJ1P38881 321 aa0.67□□□□□ -2.3
SWI5YDR146C DML1Q03652 475 aa0.67□□□□□ -2.3
SWI5YDR146C GAL83Q04739 417 aa0.67□□□□□ -2.3
SWI5YDR146C UPS1Q05776 175 aa0.67□□□□□ -2.3
SWI5YDR146C SHH4Q06236 168 aa0.67□□□□□ -2.3
SWI5YDR146C BRX1Q08235 291 aaKnown RBP0.67□□□□□ -2.3
SWI5YDR146C ATP7P30902 174 aa0.66□□□□□ -2.3
SWI5YDR146C CPR5P35176 225 aa0.66□□□□□ -2.3
SWI5YDR146C MRPL15P36523 253 aa0.66□□□□□ -2.3
SWI5YDR146C ETR1P38071 380 aa0.66□□□□□ -2.3
SWI5YDR146C SOL1P50278 321 aa0.66□□□□□ -2.3
SWI5YDR146C YHP1Q04116 353 aa0.66□□□□□ -2.3
SWI5YDR146C HPT1Q04178 221 aaKnown RBP0.66□□□□□ -2.3
SWI5YDR146C STF2P16965 84 aa0.65□□□□□ -2.3
SWI5YDR146C MAK31P23059 88 aa0.65□□□□□ -2.3
SWI5YDR146C YBL010CP32788 280 aa0.65□□□□□ -2.3
SWI5YDR146C HUA1P40325 198 aa0.65□□□□□ -2.3
SWI5YDR146C RFC2P40348 353 aa0.65□□□□□ -2.3
SWI5YDR146C ELP6Q04868 273 aa0.65□□□□□ -2.3
SWI5YDR146C YET3Q07451 203 aa0.65□□□□□ -2.3
SWI5YDR146C STP22P25604 385 aa0.65□□□□□ -2.31
SWI5YDR146C POG1P40473 351 aa0.65□□□□□ -2.31
SWI5YDR146C TTI2P47168 421 aa0.65□□□□□ -2.31
SWI5YDR146C YGL235WP53071 178 aa0.65□□□□□ -2.31
SWI5YDR146C HOP2P53187 214 aa0.65□□□□□ -2.31
SWI5YDR146C GRE1Q08969 168 aa0.65□□□□□ -2.31
SWI5YDR146C YER188C-AP0C0V2 99 aa0.64□□□□□ -2.31
SWI5YDR146C SEC14P24280 304 aaKnown RBP0.64□□□□□ -2.31
SWI5YDR146C CCS1P40202 249 aaKnown RBP0.64□□□□□ -2.31
SWI5YDR146C PIR1Q03178 341 aa0.64□□□□□ -2.31
SWI5YDR146C YPR127WQ06494 345 aa0.64□□□□□ -2.31
SWI5YDR146C ATG41Q12048 136 aa0.64□□□□□ -2.31
SWI5YDR146C YRA2P36036 203 aaKnown RBP RIP-Chip data0.64□□□□□ -2.31not detected
SWI5YDR146C SBH1P52870 82 aa0.64□□□□□ -2.31
SWI5YDR146C MET31Q03081 177 aa0.64□□□□□ -2.31
SWI5YDR146C RIM9Q04734 239 aa0.64□□□□□ -2.31
SWI5YDR146C RPL35AP0CX84 120 aaKnown RBP0.63□□□□□ -2.31
SWI5YDR146C RPL35BP0CX85 120 aaKnown RBP0.63□□□□□ -2.31
SWI5YDR146C HSP30P25619 332 aa0.63□□□□□ -2.31
SWI5YDR146C TRR1P29509 319 aaKnown RBP0.63□□□□□ -2.31
SWI5YDR146C PAC10P48363 199 aa0.63□□□□□ -2.31
SWI5YDR146C YMR030W-AQ3E760 96 aa0.63□□□□□ -2.31
SWI5YDR146C RAD51P25454 400 aa0.62□□□□□ -2.31
SWI5YDR146C YHL037CP38733 133 aa0.62□□□□□ -2.31
SWI5YDR146C YIP3P53633 176 aa0.62□□□□□ -2.31
SWI5YDR146C GIM3P53900 129 aa0.62□□□□□ -2.31
SWI5YDR146C YOR214CQ12282 236 aa0.62□□□□□ -2.31
SWI5YDR146C EGD2P38879 174 aaKnown RBP0.62□□□□□ -2.31
SWI5YDR146C YKR005CQ02203 525 aa0.62□□□□□ -2.31
SWI5YDR146C CSH1P38287 376 aa0.61□□□□□ -2.31
SWI5YDR146C XPT1P47165 209 aa0.61□□□□□ -2.31
SWI5YDR146C AIM36Q03798 255 aa0.61□□□□□ -2.31
SWI5YDR146C NUF2P33895 451 aa0.61□□□□□ -2.31
SWI5YDR146C SEC72P39742 193 aaKnown RBP0.61□□□□□ -2.31
SWI5YDR146C YEL073CP39974 107 aa0.61□□□□□ -2.31
SWI5YDR146C NQM1P53228 333 aaPredicted RBP0.61□□□□□ -2.31
SWI5YDR146C YNL140CP53910 189 aa0.61□□□□□ -2.31
SWI5YDR146C HSK3P69852 69 aa0.61□□□□□ -2.31
SWI5YDR146C VPS28Q02767 242 aa0.61□□□□□ -2.31
SWI5YDR146C ATG38Q05789 226 aaKnown RBP0.61□□□□□ -2.31
SWI5YDR146C YLR050CQ12155 161 aaKnown RBP0.61□□□□□ -2.31
SWI5YDR146C RIF1P29539 1916 aa0.6□□□□□ -2.31
SWI5YDR146C UGX2P32772 223 aa0.6□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 32.9 ms