RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W CRD1Q07560 283 aa3.64□□□□□ -1.83
TRS85YDR108W PAU20Q08322 120 aa3.64□□□□□ -1.83
TRS85YDR108W RPS10AQ08745 105 aaPredicted RBP3.64□□□□□ -1.83
TRS85YDR108W RPS21BQ3E754 87 aaKnown RBP3.64□□□□□ -1.83
TRS85YDR108W PAU9Q3E770 120 aa3.64□□□□□ -1.83
TRS85YDR108W YAR066WP0CX18 203 aa3.63□□□□□ -1.83
TRS85YDR108W YHR214WP0CX19 203 aa3.63□□□□□ -1.83
TRS85YDR108W GLN3P18494 730 aa3.63□□□□□ -1.83
TRS85YDR108W MRPL20P22354 195 aaPredicted RBP3.63□□□□□ -1.83
TRS85YDR108W HXT4P32467 576 aa3.63□□□□□ -1.83
TRS85YDR108W YHR097CP38809 366 aaKnown RBP3.63□□□□□ -1.83
TRS85YDR108W UME6P39001 836 aa3.63□□□□□ -1.83
TRS85YDR108W OST2P46964 130 aa3.63□□□□□ -1.83
TRS85YDR108W TIS11P47977 285 aa3.63□□□□□ -1.83
TRS85YDR108W YGR039WP53225 103 aa3.63□□□□□ -1.83
TRS85YDR108W YML079WQ03629 201 aa3.63□□□□□ -1.83
TRS85YDR108W YDL007C-AQ2V2Q0 85 aa3.63□□□□□ -1.83
TRS85YDR108W ODC2Q99297 307 aa3.63□□□□□ -1.83
TRS85YDR108W YOR338WQ99326 363 aa3.63□□□□□ -1.83
TRS85YDR108W YPL229WQ99395 206 aa3.63□□□□□ -1.83
TRS85YDR108W PRE2P30656 287 aaKnown RBP3.63□□□□□ -1.83
TRS85YDR108W YIL059CP40520 121 aa3.63□□□□□ -1.83
TRS85YDR108W YJL213WP40896 331 aa3.63□□□□□ -1.83
TRS85YDR108W YMR206WQ03695 313 aa3.63□□□□□ -1.83
TRS85YDR108W YHM2Q04013 314 aa3.63□□□□□ -1.83
TRS85YDR108W YPR098CQ06089 161 aa3.63□□□□□ -1.83
TRS85YDR108W STP4Q07351 490 aa3.63□□□□□ -1.83
TRS85YDR108W POC4Q12245 148 aaPredicted RBP3.63□□□□□ -1.83
TRS85YDR108W JID1Q12350 301 aa3.63□□□□□ -1.83
TRS85YDR108W PEX11Q12462 236 aa3.63□□□□□ -1.83
TRS85YDR108W FMP49A0A023PZB3 126 aa3.62□□□□□ -1.83
TRS85YDR108W COX5AP00424 153 aa3.62□□□□□ -1.83
TRS85YDR108W COX9P07255 59 aa3.62□□□□□ -1.83
TRS85YDR108W MRS1P07266 363 aa3.62□□□□□ -1.83
TRS85YDR108W ERG8P24521 451 aa3.62□□□□□ -1.83
TRS85YDR108W ERG4P25340 473 aa3.62□□□□□ -1.83
TRS85YDR108W MF(ALPHA)2P32435 120 aa3.62□□□□□ -1.83
TRS85YDR108W MKK1P32490 508 aa3.62□□□□□ -1.83
TRS85YDR108W INM1P38710 295 aa3.62□□□□□ -1.83
TRS85YDR108W FYV4P38783 130 aaPredicted RBP3.62□□□□□ -1.83
TRS85YDR108W SCD6P45978 349 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83 RIP-Chip
TRS85YDR108W RPL21AQ02753 160 aaKnown RBP3.62□□□□□ -1.83
TRS85YDR108W IES4Q08561 116 aa3.62□□□□□ -1.83
TRS85YDR108W NDD1Q08887 554 aa3.62□□□□□ -1.83
TRS85YDR108W YOR376WQ08900 122 aa3.62□□□□□ -1.83
TRS85YDR108W RPL21BQ12672 160 aaKnown RBP3.62□□□□□ -1.83
TRS85YDR108W ATG40Q99325 256 aa3.62□□□□□ -1.83
TRS85YDR108W MRS4P23500 304 aa3.61□□□□□ -1.83
TRS85YDR108W SRP21P32342 167 aa3.61□□□□□ -1.83
TRS85YDR108W CMC1P36064 111 aa3.61□□□□□ -1.83
TRS85YDR108W TIF34P40217 347 aaKnown RBP3.61□□□□□ -1.83
TRS85YDR108W SAS2P40963 338 aa3.61□□□□□ -1.83
TRS85YDR108W VPS25P47142 202 aa3.61□□□□□ -1.83
TRS85YDR108W YDL186WP48568 277 aa3.61□□□□□ -1.83
TRS85YDR108W TOS2P50078 622 aa3.61□□□□□ -1.83
TRS85YDR108W NRG1Q03125 231 aa3.61□□□□□ -1.83
TRS85YDR108W SYM1Q06563 197 aa3.61□□□□□ -1.83
TRS85YDR108W YOL073CQ08232 322 aa3.61□□□□□ -1.83
TRS85YDR108W DGA1Q08650 418 aa3.61□□□□□ -1.83
TRS85YDR108W YCR024C-BQ3E7Z8 88 aa3.61□□□□□ -1.83
TRS85YDR108W RAD6P06104 172 aa3.61□□□□□ -1.83
TRS85YDR108W CHO1P08456 276 aa3.61□□□□□ -1.83
TRS85YDR108W STE18P18852 110 aa3.61□□□□□ -1.83
TRS85YDR108W NFS1P25374 497 aa3.61□□□□□ -1.83
TRS85YDR108W SPS18P32572 300 aa3.61□□□□□ -1.83
TRS85YDR108W SWD2P36104 329 aaPredicted RBP3.61□□□□□ -1.83
TRS85YDR108W VBA2P38358 474 aaKnown RBP3.61□□□□□ -1.83
TRS85YDR108W YJL118WP47022 219 aa3.61□□□□□ -1.83
TRS85YDR108W YIP5P53108 310 aa3.61□□□□□ -1.83
TRS85YDR108W WSC2P53832 503 aa3.61□□□□□ -1.83
TRS85YDR108W YPQ1Q12010 308 aa3.61□□□□□ -1.83
TRS85YDR108W RPS13P05756 151 aaKnown RBP3.6□□□□□ -1.83
TRS85YDR108W RPL12AP0CX53 165 aaKnown RBP3.6□□□□□ -1.83
TRS85YDR108W RPL12BP0CX54 165 aa3.6□□□□□ -1.83
TRS85YDR108W SGE1P33335 543 aa3.6□□□□□ -1.83
TRS85YDR108W GPX1P36014 167 aa3.6□□□□□ -1.83
TRS85YDR108W ECM14P38836 430 aa3.6□□□□□ -1.83
TRS85YDR108W YIL169CP40442 995 aa3.6□□□□□ -1.83
TRS85YDR108W CWP2P43497 92 aa3.6□□□□□ -1.83
TRS85YDR108W YJR124CP47159 448 aa3.6□□□□□ -1.83
TRS85YDR108W UBC9P50623 157 aaPredicted RBP3.6□□□□□ -1.83
TRS85YDR108W OGG1P53397 376 aaPredicted RBP3.6□□□□□ -1.83
TRS85YDR108W ABF2Q02486 183 aa3.6□□□□□ -1.83
TRS85YDR108W RIM9Q04734 239 aa3.6□□□□□ -1.83
TRS85YDR108W YMR310CQ04867 317 aaPredicted RBP3.6□□□□□ -1.83
TRS85YDR108W TAD3Q9URQ3 322 aa3.6□□□□□ -1.83
TRS85YDR108W CTA1P15202 515 aa3.59□□□□□ -1.83
TRS85YDR108W UBC5P15732 148 aa3.59□□□□□ -1.83
TRS85YDR108W VMA11P32842 164 aa3.59□□□□□ -1.83
TRS85YDR108W YGP1P38616 354 aaKnown RBP3.59□□□□□ -1.83
TRS85YDR108W BTT1P40314 149 aaPredicted RBP3.59□□□□□ -1.83
TRS85YDR108W MZM1Q03429 123 aaPredicted RBP3.59□□□□□ -1.83
TRS85YDR108W BET5Q03630 159 aa3.59□□□□□ -1.83
TRS85YDR108W ARC18Q05933 178 aaKnown RBP3.59□□□□□ -1.83
TRS85YDR108W NAT3Q06504 195 aa3.59□□□□□ -1.83
TRS85YDR108W YDL242WQ07746 117 aa3.59□□□□□ -1.83
TRS85YDR108W HRT1Q08273 121 aa3.59□□□□□ -1.83
TRS85YDR108W SWT1Q12104 458 aa3.59□□□□□ -1.83
TRS85YDR108W YRF1-3P0CX14 1859 aa3.59□□□□□ -1.83
TRS85YDR108W YRF1-7P0CX15 1859 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 49.6 ms