RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C YNL033WP53964 284 aa2.32□□□□□ -2.04
SHU2YDR078C TMA20P89886 181 aaPredicted RBP2.32□□□□□ -2.04
SHU2YDR078C MAK3Q03503 176 aa2.32□□□□□ -2.04
SHU2YDR078C DAS2Q12084 232 aa2.32□□□□□ -2.04
SHU2YDR078C ATP20Q12233 115 aa2.32□□□□□ -2.04
SHU2YDR078C FIG1P38224 298 aa2.31□□□□□ -2.04
SHU2YDR078C YPR127WQ06494 345 aa2.31□□□□□ -2.04
SHU2YDR078C FYV12Q08559 129 aa2.31□□□□□ -2.04
SHU2YDR078C FLO9P39712 1322 aa2.31□□□□□ -2.04
SHU2YDR078C YCR023CP25351 611 aa2.3□□□□□ -2.04
SHU2YDR078C CPR5P35176 225 aa2.3□□□□□ -2.04
SHU2YDR078C YKR045CP36138 183 aa2.3□□□□□ -2.04
SHU2YDR078C CSH1P38287 376 aa2.3□□□□□ -2.04
SHU2YDR078C YBR219CP38317 127 aa2.3□□□□□ -2.04
SHU2YDR078C FYV4P38783 130 aaPredicted RBP2.3□□□□□ -2.04
SHU2YDR078C YPL073CP40323 161 aa2.3□□□□□ -2.04
SHU2YDR078C SBH1P52870 82 aa2.3□□□□□ -2.04
SHU2YDR078C THI74Q04083 370 aa2.3□□□□□ -2.04
SHU2YDR078C GAL83Q04739 417 aa2.3□□□□□ -2.04
SHU2YDR078C RNH202Q05635 350 aa2.3□□□□□ -2.04
SHU2YDR078C YPR174CQ06616 221 aaPredicted RBP2.3□□□□□ -2.04
SHU2YDR078C YOR214CQ12282 236 aa2.3□□□□□ -2.04
SHU2YDR078C RPS28BP0C0X0 67 aaKnown RBP2.29□□□□□ -2.04
SHU2YDR078C NUF2P33895 451 aa2.29□□□□□ -2.04
SHU2YDR078C YLR162WQ06235 118 aa2.29□□□□□ -2.04
SHU2YDR078C PRP11Q07350 266 aaPredicted RBP2.29□□□□□ -2.04
SHU2YDR078C RPS28AQ3E7X9 67 aaPredicted RBP2.29□□□□□ -2.04
SHU2YDR078C STP22P25604 385 aa2.28□□□□□ -2.04
SHU2YDR078C RRT1P38192 103 aa2.28□□□□□ -2.04
SHU2YDR078C YER135CP40082 130 aa2.28□□□□□ -2.04
SHU2YDR078C YGL101WP53144 215 aa2.28□□□□□ -2.04
SHU2YDR078C TIM13P53299 105 aa2.28□□□□□ -2.04
SHU2YDR078C HSP30P25619 332 aa2.27□□□□□ -2.05
SHU2YDR078C SLM6P38343 150 aa2.27□□□□□ -2.05
SHU2YDR078C YHL018WP38744 120 aaPredicted RBP2.27□□□□□ -2.05
SHU2YDR078C DAD4P69851 72 aa2.27□□□□□ -2.05
SHU2YDR078C YKR005CQ02203 525 aa2.27□□□□□ -2.05
SHU2YDR078C VPS28Q02767 242 aa2.27□□□□□ -2.05
SHU2YDR078C YPR013CQ12145 317 aa2.27□□□□□ -2.05
SHU2YDR078C EFG1Q3E705 233 aaKnown RBP2.27□□□□□ -2.05
SHU2YDR078C UBI4P0CG63 381 aaKnown RBP2.26□□□□□ -2.05
SHU2YDR078C YBR220CP38318 560 aa2.26□□□□□ -2.05
SHU2YDR078C GLR1P41921 483 aaKnown RBP2.26□□□□□ -2.05
SHU2YDR078C SBH2P52871 88 aa2.26□□□□□ -2.05
SHU2YDR078C YDR476CQ03362 224 aa2.26□□□□□ -2.05
SHU2YDR078C PET20Q99373 253 aa2.26□□□□□ -2.05
SHU2YDR078C COX8P04039 78 aa2.25□□□□□ -2.05
SHU2YDR078C RPL13BP40212 199 aaKnown RBP2.25□□□□□ -2.05
SHU2YDR078C THG1P53215 237 aaKnown RBP2.25□□□□□ -2.05
SHU2YDR078C LSM3P57743 89 aaKnown RBP2.25□□□□□ -2.05
SHU2YDR078C CSI2Q08054 341 aa2.25□□□□□ -2.05
SHU2YDR078C RPL13AQ12690 199 aaPredicted RBP2.25□□□□□ -2.05
SHU2YDR078C MDM35O60200 86 aa2.24□□□□□ -2.05
SHU2YDR078C BUB2P26448 306 aaPredicted RBP2.24□□□□□ -2.05
SHU2YDR078C SFK1P35735 353 aa2.24□□□□□ -2.05
SHU2YDR078C BAT2P47176 376 aaKnown RBP2.24□□□□□ -2.05
SHU2YDR078C ORM1P53224 222 aa2.24□□□□□ -2.05
SHU2YDR078C YHR007C-AQ07074 71 aa2.24□□□□□ -2.05
SHU2YDR078C YOR015WQ12169 119 aa2.24□□□□□ -2.05
SHU2YDR078C RAD6P06104 172 aa2.23□□□□□ -2.05
SHU2YDR078C YGL010WP25338 174 aa2.23□□□□□ -2.05
SHU2YDR078C GSP2P32836 220 aaKnown RBP2.23□□□□□ -2.05
SHU2YDR078C UPS2P35200 230 aa2.23□□□□□ -2.05
SHU2YDR078C GRX5Q02784 150 aa2.23□□□□□ -2.05
SHU2YDR078C FIT2Q08906 153 aa2.23□□□□□ -2.05
SHU2YDR078C YPR202WQ08993 238 aa2.23□□□□□ -2.05
SHU2YDR078C YLR046CQ12253 270 aa2.23□□□□□ -2.05
SHU2YDR078C YOR381W-AQ3E804 55 aa2.23□□□□□ -2.05
SHU2YDR078C YOL162WP0CF19 215 aa2.22□□□□□ -2.05
SHU2YDR078C RPL2AP0CX45 254 aaKnown RBP2.22□□□□□ -2.05
SHU2YDR078C RPL2BP0CX46 254 aaKnown RBP2.22□□□□□ -2.05
SHU2YDR078C GPA2P10823 449 aa2.22□□□□□ -2.05
SHU2YDR078C APQ12P40532 138 aa2.22□□□□□ -2.05
SHU2YDR078C PIR1Q03178 341 aa2.22□□□□□ -2.05
SHU2YDR078C SYM1Q06563 197 aa2.22□□□□□ -2.05
SHU2YDR078C PST2Q12335 198 aaKnown RBP2.22□□□□□ -2.05
SHU2YDR078C MSB2P32334 1306 aa2.21□□□□□ -2.06
SHU2YDR078C YEL028WP39989 153 aa2.21□□□□□ -2.06
SHU2YDR078C RIO2P40160 425 aaKnown RBP2.21□□□□□ -2.06
SHU2YDR078C DLS1P40366 167 aa2.21□□□□□ -2.06
SHU2YDR078C NSE4P43124 402 aa2.21□□□□□ -2.06
SHU2YDR078C DML1Q03652 475 aa2.21□□□□□ -2.06
SHU2YDR078C TRM3Q07527 1436 aa2.21□□□□□ -2.06
SHU2YDR078C ATP5P09457 212 aa2.2□□□□□ -2.06
SHU2YDR078C PBI2P0CT04 75 aaKnown RBP2.2□□□□□ -2.06
SHU2YDR078C RPL30P14120 105 aaKnown RBP2.2□□□□□ -2.06
SHU2YDR078C PEX34P25584 144 aa2.2□□□□□ -2.06
SHU2YDR078C YEL073CP39974 107 aa2.2□□□□□ -2.06
SHU2YDR078C NQM1P53228 333 aaPredicted RBP2.2□□□□□ -2.06
SHU2YDR078C RRP17Q04031 235 aaPredicted RBP2.2□□□□□ -2.06
SHU2YDR078C RIM9Q04734 239 aa2.2□□□□□ -2.06
SHU2YDR078C UPS1Q05776 175 aa2.2□□□□□ -2.06
SHU2YDR078C QCR8P08525 94 aa2.19□□□□□ -2.06
SHU2YDR078C HPA3P39979 161 aa2.19□□□□□ -2.06
SHU2YDR078C FLX1P40464 311 aa2.19□□□□□ -2.06
SHU2YDR078C ALB1P47019 175 aaPredicted RBP2.19□□□□□ -2.06
SHU2YDR078C YHP1Q04116 353 aa2.19□□□□□ -2.06
SHU2YDR078C UBC8P28263 218 aa2.18□□□□□ -2.06
SHU2YDR078C PTC1P35182 281 aa2.18□□□□□ -2.06
SHU2YDR078C YRA2P36036 203 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
Retrieved 100 of 5,963 RNA–protein pairs in 93 ms