RNA–Protein interactions for RNA: YDL229W

SSB1, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB1, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB1	YDL229W	PRM8	P53174	237 aa		3.77	□□□□□ -1.81
SSB1	YDL229W	YNL165W	P53891	406 aa		3.77	□□□□□ -1.81
SSB1	YDL229W	YHM2	Q04013	314 aa		3.77	□□□□□ -1.81
SSB1	YDL229W	YDL218W	Q07629	317 aa		3.77	□□□□□ -1.81
SSB1	YDL229W	ICT1	Q12385	394 aa		3.77	□□□□□ -1.81
SSB1	YDL229W	MSI1	P13712	422 aa		3.76	□□□□□ -1.81
SSB1	YDL229W	TRX3	P25372	127 aa		3.76	□□□□□ -1.81
SSB1	YDL229W	SDS24	P38314	527 aa		3.76	□□□□□ -1.81
SSB1	YDL229W	ATG12	P38316	186 aa		3.76	□□□□□ -1.81
SSB1	YDL229W	EGT2	P42835	1041 aa		3.76	□□□□□ -1.81
SSB1	YDL229W	UBX6	P47049	396 aa		3.76	□□□□□ -1.81
SSB1	YDL229W	AIM25	P47140	327 aa		3.76	□□□□□ -1.81
SSB1	YDL229W	UBP8	P50102	471 aa		3.76	□□□□□ -1.81
SSB1	YDL229W	CAB4	P53332	305 aa		3.76	□□□□□ -1.81
SSB1	YDL229W	YMR103C	Q04436	120 aa		3.76	□□□□□ -1.81
SSB1	YDL229W	NAT3	Q06504	195 aa		3.76	□□□□□ -1.81
SSB1	YDL229W	FIT3	Q08907	204 aa		3.76	□□□□□ -1.81
SSB1	YDL229W	FKS1	P38631	1876 aa	Known RBP	3.76	□□□□□ -1.81
SSB1	YDL229W	RPL28	P02406	149 aa	Known RBP	3.75	□□□□□ -1.81
SSB1	YDL229W	RPL2A	P0CX45	254 aa	Known RBP	3.75	□□□□□ -1.81
SSB1	YDL229W	RPL2B	P0CX46	254 aa	Known RBP	3.75	□□□□□ -1.81
SSB1	YDL229W	TOM40	P23644	387 aa	Known RBP	3.75	□□□□□ -1.81
SSB1	YDL229W	RPS2	P25443	254 aa	Known RBP	3.75	□□□□□ -1.81
SSB1	YDL229W	YCR099C	P25657	155 aa		3.75	□□□□□ -1.81
SSB1	YDL229W	SRP21	P32342	167 aa		3.75	□□□□□ -1.81
SSB1	YDL229W	FMP46	P36141	133 aa	Known RBP	3.75	□□□□□ -1.81
SSB1	YDL229W	ATX1	P38636	73 aa		3.75	□□□□□ -1.81
SSB1	YDL229W	PEX22	P39718	180 aa		3.75	□□□□□ -1.81
SSB1	YDL229W	SDC1	Q03323	175 aa		3.75	□□□□□ -1.81
SSB1	YDL229W	UPS1	Q05776	175 aa		3.75	□□□□□ -1.81
SSB1	YDL229W	DGA1	Q08650	418 aa		3.75	□□□□□ -1.81
SSB1	YDL229W	COX17	Q12287	69 aa		3.75	□□□□□ -1.81
SSB1	YDL229W	IZH2	Q12442	317 aa		3.75	□□□□□ -1.81
SSB1	YDL229W	PEX11	Q12462	236 aa		3.75	□□□□□ -1.81
SSB1	YDL229W	POR1	P04840	283 aa	Known RBP	3.74	□□□□□ -1.81
SSB1	YDL229W	HTA1	P04911	132 aa	Known RBP	3.74	□□□□□ -1.81
SSB1	YDL229W	RPL40A	P0CH08	128 aa	Known RBP	3.74	□□□□□ -1.81
SSB1	YDL229W	RPL40B	P0CH09	128 aa	Known RBP	3.74	□□□□□ -1.81
SSB1	YDL229W	CDC5	P32562	705 aa		3.74	□□□□□ -1.81
SSB1	YDL229W	YEA4	P40004	342 aa		3.74	□□□□□ -1.81
SSB1	YDL229W	YJL213W	P40896	331 aa		3.74	□□□□□ -1.81
SSB1	YDL229W	PAU5	P43575	122 aa		3.74	□□□□□ -1.81
SSB1	YDL229W	OST2	P46964	130 aa		3.74	□□□□□ -1.81
SSB1	YDL229W	EMC4	P53073	190 aa		3.74	□□□□□ -1.81
SSB1	YDL229W	YNR071C	P53757	342 aa		3.74	□□□□□ -1.81
SSB1	YDL229W	MRX11	Q03079	207 aa		3.74	□□□□□ -1.81
SSB1	YDL229W	YMR310C	Q04867	317 aa	Predicted RBP	3.74	□□□□□ -1.81
SSB1	YDL229W	ARC18	Q05933	178 aa	Known RBP	3.74	□□□□□ -1.81
SSB1	YDL229W	YOR387C	Q08910	206 aa		3.74	□□□□□ -1.81
SSB1	YDL229W	GSC2	P40989	1895 aa		3.74	□□□□□ -1.81
SSB1	YDL229W	ECM12	O13529	151 aa		3.74	□□□□□ -1.81
SSB1	YDL229W	YLR302C	O13544	120 aa		3.74	□□□□□ -1.81
SSB1	YDL229W	ALK2	P32789	676 aa	Predicted RBP	3.74	□□□□□ -1.81
SSB1	YDL229W	HTD2	P38790	280 aa	Known RBP	3.74	□□□□□ -1.81
SSB1	YDL229W	ECM14	P38836	430 aa		3.74	□□□□□ -1.81
SSB1	YDL229W	MST28	P39552	234 aa		3.74	□□□□□ -1.81
SSB1	YDL229W	VPS71	Q03433	280 aa		3.74	□□□□□ -1.81
SSB1	YDL229W	YPR098C	Q06089	161 aa		3.74	□□□□□ -1.81
SSB1	YDL229W	PRS5	Q12265	496 aa	Known RBP	3.74	□□□□□ -1.81
SSB1	YDL229W	BOL1	Q3E793	110 aa		3.74	□□□□□ -1.81
SSB1	YDL229W	RAD6	P06104	172 aa		3.73	□□□□□ -1.81
SSB1	YDL229W	YAR066W	P0CX18	203 aa		3.73	□□□□□ -1.81
SSB1	YDL229W	YHR214W	P0CX19	203 aa		3.73	□□□□□ -1.81
SSB1	YDL229W	DAT1	P13483	248 aa	Known RBP	3.73	□□□□□ -1.81
SSB1	YDL229W	ERG24	P32462	438 aa	Known RBP	3.73	□□□□□ -1.81
SSB1	YDL229W	YKL102C	P34249	101 aa		3.73	□□□□□ -1.81
SSB1	YDL229W	YER134C	P40081	178 aa		3.73	□□□□□ -1.81
SSB1	YDL229W	CUP9	P41817	306 aa		3.73	□□□□□ -1.81
SSB1	YDL229W	YJL028W	P47062	111 aa		3.73	□□□□□ -1.81
SSB1	YDL229W	BAT2	P47176	376 aa	Known RBP	3.73	□□□□□ -1.81
SSB1	YDL229W	GEP7	P53171	287 aa		3.73	□□□□□ -1.81
SSB1	YDL229W	PGA1	P53896	198 aa		3.73	□□□□□ -1.81
SSB1	YDL229W	YPL039W	Q03080	316 aa		3.73	□□□□□ -1.81
SSB1	YDL229W	YMR166C	Q03829	368 aa		3.73	□□□□□ -1.81
SSB1	YDL229W	ATG41	Q12048	136 aa		3.73	□□□□□ -1.81
SSB1	YDL229W	FCY1	Q12178	158 aa		3.73	□□□□□ -1.81
SSB1	YDL229W	COX19	Q3E731	98 aa		3.73	□□□□□ -1.81
SSB1	YDL229W	KTI11	Q3E840	82 aa		3.73	□□□□□ -1.81
SSB1	YDL229W	TAD3	Q9URQ3	322 aa		3.73	□□□□□ -1.81
SSB1	YDL229W	ILV1	P00927	576 aa	Known RBP	3.72	□□□□□ -1.81
SSB1	YDL229W	PAU16	P35994	123 aa		3.72	□□□□□ -1.81
SSB1	YDL229W	RPB11	P38902	120 aa		3.72	□□□□□ -1.81
SSB1	YDL229W	CYB5	P40312	120 aa		3.72	□□□□□ -1.81
SSB1	YDL229W	VHS2	P40463	436 aa		3.72	□□□□□ -1.81
SSB1	YDL229W	SUN4	P53616	420 aa		3.72	□□□□□ -1.81
SSB1	YDL229W	ERF2	Q06551	359 aa		3.72	□□□□□ -1.81
SSB1	YDL229W	YPS3	Q12303	508 aa		3.72	□□□□□ -1.81
SSB1	YDL229W	YLR363W-A	Q3E747	85 aa		3.72	□□□□□ -1.81
SSB1	YDL229W	YNL277W-A	Q3E7Z0	62 aa		3.72	□□□□□ -1.81
SSB1	YDL229W	ATG40	Q99325	256 aa		3.72	□□□□□ -1.81
SSB1	YDL229W	FLO11	P08640	1367 aa		3.72	□□□□□ -1.81
SSB1	YDL229W	MRS1	P07266	363 aa		3.72	□□□□□ -1.81
SSB1	YDL229W	MDM10	P18409	493 aa		3.72	□□□□□ -1.81
SSB1	YDL229W	MKK1	P32490	508 aa		3.72	□□□□□ -1.81
SSB1	YDL229W	MID2	P36027	376 aa		3.72	□□□□□ -1.81
SSB1	YDL229W	EMC3	P36039	253 aa		3.72	□□□□□ -1.81
SSB1	YDL229W	KNH1	P50112	268 aa		3.72	□□□□□ -1.81
SSB1	YDL229W	LYS5	P50113	272 aa		3.72	□□□□□ -1.81
SSB1	YDL229W	YOR097C	Q12274	175 aa	Predicted RBP	3.72	□□□□□ -1.81
SSB1	YDL229W	YIL102C-A	Q2V2P5	75 aa		3.72	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 215 ms