RNA–Protein interactions for RNA: YDL213C

NOP6, Transcript of rRNA-binding protein required for 40S ribosomal subunit biogenesis, yeast

Gene NOP6, Length 678 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOP6	YDL213C	YNL277W-A	Q3E7Z0	62 aa		3.04	□□□□□ -1.92
NOP6	YDL213C	YBR298C-A	Q8TGK4	73 aa		3.04	□□□□□ -1.92
NOP6	YDL213C	RPL9A	P05738	191 aa	Known RBP	3.03	□□□□□ -1.92
NOP6	YDL213C	CPA1	P07258	411 aa	Known RBP	3.03	□□□□□ -1.92
NOP6	YDL213C	TOM40	P23644	387 aa	Known RBP	3.03	□□□□□ -1.92
NOP6	YDL213C	SPT14	P32363	452 aa		3.03	□□□□□ -1.92
NOP6	YDL213C	SNC2	P33328	115 aa		3.03	□□□□□ -1.92
NOP6	YDL213C	SWD3	P38123	315 aa		3.03	□□□□□ -1.92
NOP6	YDL213C	YBR220C	P38318	560 aa		3.03	□□□□□ -1.92
NOP6	YDL213C	YHL026C	P38740	315 aa		3.03	□□□□□ -1.92
NOP6	YDL213C	ARC15	P40518	154 aa	RIP-Chip data	3.03	□□□□□ -1.92	not detected
NOP6	YDL213C	RPL9B	P51401	191 aa	Known RBP	3.03	□□□□□ -1.92
NOP6	YDL213C	AIM11	P87275	137 aa		3.03	□□□□□ -1.92
NOP6	YDL213C	VPS28	Q02767	242 aa		3.03	□□□□□ -1.92
NOP6	YDL213C	RSM10	Q03201	203 aa		3.03	□□□□□ -1.92
NOP6	YDL213C	TMA23	Q03525	211 aa		3.03	□□□□□ -1.92
NOP6	YDL213C	AIM36	Q03798	255 aa		3.03	□□□□□ -1.92
NOP6	YDL213C	YMR253C	Q04835	414 aa		3.03	□□□□□ -1.92
NOP6	YDL213C	ZEO1	Q08245	113 aa		3.03	□□□□□ -1.92
NOP6	YDL213C	FCF2	Q12035	217 aa	Predicted RBP	3.03	□□□□□ -1.92
NOP6	YDL213C	YAR023C	D6VPM8	179 aa		3.02	□□□□□ -1.93
NOP6	YDL213C	DDI2	P0CH63	225 aa		3.02	□□□□□ -1.93
NOP6	YDL213C	DDI3	P0CH64	225 aa		3.02	□□□□□ -1.93
NOP6	YDL213C	PHO13	P19881	312 aa		3.02	□□□□□ -1.93
NOP6	YDL213C	YBL010C	P32788	280 aa		3.02	□□□□□ -1.93
NOP6	YDL213C	SUI1	P32911	108 aa	Known RBP	3.02	□□□□□ -1.93
NOP6	YDL213C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	3.02	□□□□□ -1.93	not detected
NOP6	YDL213C	ECM34	P38728	170 aa		3.02	□□□□□ -1.93
NOP6	YDL213C	YHR140W	P38842	239 aa		3.02	□□□□□ -1.93
NOP6	YDL213C	VTC1	P40046	129 aa	RIP-Chip data	3.02	□□□□□ -1.93	not detected
NOP6	YDL213C	MCH1	Q07376	486 aa		3.02	□□□□□ -1.93
NOP6	YDL213C	YCL001W-B	Q96VH2	84 aa		3.02	□□□□□ -1.93
NOP6	YDL213C	ODC2	Q99297	307 aa		3.02	□□□□□ -1.93
NOP6	YDL213C	YOL085C	Q99345	113 aa		3.02	□□□□□ -1.93
NOP6	YDL213C	SPP41	P38904	1435 aa		3.02	□□□□□ -1.93
NOP6	YDL213C	TIM9	O74700	87 aa		3.01	□□□□□ -1.93
NOP6	YDL213C	COX10	P21592	462 aa		3.01	□□□□□ -1.93
NOP6	YDL213C	RPL14A	P36105	138 aa	Known RBP	3.01	□□□□□ -1.93
NOP6	YDL213C	RPL14B	P38754	138 aa	Known RBP	3.01	□□□□□ -1.93
NOP6	YDL213C	FYV4	P38783	130 aa	Predicted RBP	3.01	□□□□□ -1.93
NOP6	YDL213C	YHR125W	P38831	101 aa		3.01	□□□□□ -1.93
NOP6	YDL213C	SFT1	P43682	97 aa		3.01	□□□□□ -1.93
NOP6	YDL213C	DSK2	P48510	373 aa		3.01	□□□□□ -1.93
NOP6	YDL213C	RPS12	P48589	143 aa	Known RBP	3.01	□□□□□ -1.93
NOP6	YDL213C	YGL193C	P53097	103 aa		3.01	□□□□□ -1.93
NOP6	YDL213C	YDR391C	Q04170	232 aa		3.01	□□□□□ -1.93
NOP6	YDL213C	SSN2	P38931	1420 aa		3.01	□□□□□ -1.93
NOP6	YDL213C	COX4	P04037	155 aa		3	□□□□□ -1.93
NOP6	YDL213C	AHT1	P29589	182 aa		3	□□□□□ -1.93
NOP6	YDL213C	MRPL27	P36526	146 aa	Predicted RBP	3	□□□□□ -1.93
NOP6	YDL213C	MRPL17	P36528	281 aa		3	□□□□□ -1.93
NOP6	YDL213C	HTD2	P38790	280 aa	Known RBP	3	□□□□□ -1.93
NOP6	YDL213C	YJL218W	P40892	196 aa	Known RBP	3	□□□□□ -1.93
NOP6	YDL213C	FCF1	Q05498	189 aa	Predicted RBP	3	□□□□□ -1.93
NOP6	YDL213C	SPA2	P23201	1466 aa	Known RBP	2.99	□□□□□ -1.93
NOP6	YDL213C	YPT31	P38555	223 aa	Known RBP	2.99	□□□□□ -1.93
NOP6	YDL213C	GVP36	P40531	326 aa	Known RBP	2.99	□□□□□ -1.93
NOP6	YDL213C	BUD25	P85052	153 aa		2.99	□□□□□ -1.93
NOP6	YDL213C	MRPS8	Q03799	155 aa		2.99	□□□□□ -1.93
NOP6	YDL213C	GAL83	Q04739	417 aa		2.99	□□□□□ -1.93
NOP6	YDL213C	SCW10	Q04951	389 aa		2.99	□□□□□ -1.93
NOP6	YDL213C	FLO11	P08640	1367 aa		2.99	□□□□□ -1.93
NOP6	YDL213C	ANB1	P19211	157 aa		2.98	□□□□□ -1.93
NOP6	YDL213C	HSP12	P22943	109 aa	Known RBP	2.98	□□□□□ -1.93
NOP6	YDL213C	NSA2	P40078	261 aa	Known RBP	2.98	□□□□□ -1.93
NOP6	YDL213C	YER188W	P40103	239 aa		2.98	□□□□□ -1.93
NOP6	YDL213C	PAC10	P48363	199 aa		2.98	□□□□□ -1.93
NOP6	YDL213C	SMD1	Q02260	146 aa	Predicted RBP	2.98	□□□□□ -1.93
NOP6	YDL213C	EST3	Q03096	181 aa		2.98	□□□□□ -1.93
NOP6	YDL213C	FSF1	Q12029	327 aa	Known RBP	2.98	□□□□□ -1.93
NOP6	YDL213C	ATO3	Q12359	275 aa		2.98	□□□□□ -1.93
NOP6	YDL213C	BUD4	P47136	1447 aa		2.98	□□□□□ -1.93
NOP6	YDL213C	MYO2	P19524	1574 aa	Known RBP	2.97	□□□□□ -1.93
NOP6	YDL213C	SPS2	P08459	502 aa		2.97	□□□□□ -1.93
NOP6	YDL213C	YKR070W	P36151	352 aa	Known RBP	2.97	□□□□□ -1.93
NOP6	YDL213C	ETR1	P38071	380 aa		2.97	□□□□□ -1.93
NOP6	YDL213C	UMP1	P38293	148 aa		2.97	□□□□□ -1.93
NOP6	YDL213C	ECO1	P43605	281 aa		2.97	□□□□□ -1.93
NOP6	YDL213C	GEP7	P53171	287 aa		2.97	□□□□□ -1.93
NOP6	YDL213C	YNR062C	P53748	327 aa		2.97	□□□□□ -1.93
NOP6	YDL213C	YDR274C	P87283	123 aa		2.97	□□□□□ -1.93
NOP6	YDL213C	YKR005C	Q02203	525 aa		2.97	□□□□□ -1.93
NOP6	YDL213C	ELC1	Q03071	99 aa		2.97	□□□□□ -1.93
NOP6	YDL213C	YDR102C	Q03864	110 aa		2.97	□□□□□ -1.93
NOP6	YDL213C	SYM1	Q06563	197 aa		2.97	□□□□□ -1.93
NOP6	YDL213C	RAD6	P06104	172 aa		2.96	□□□□□ -1.94
NOP6	YDL213C	RAD10	P06838	210 aa		2.96	□□□□□ -1.94
NOP6	YDL213C	YGR026W	P53217	278 aa		2.96	□□□□□ -1.94
NOP6	YDL213C	MRPS16	Q02608	121 aa		2.96	□□□□□ -1.94
NOP6	YDL213C	TVP18	Q04767	167 aa		2.96	□□□□□ -1.94
NOP6	YDL213C	FYV12	Q08559	129 aa		2.96	□□□□□ -1.94
NOP6	YDL213C	KTI11	Q3E840	82 aa		2.96	□□□□□ -1.94
NOP6	YDL213C	HSL1	P34244	1518 aa		2.96	□□□□□ -1.94
NOP6	YDL213C	TSC11	P40061	1430 aa		2.95	□□□□□ -1.94
NOP6	YDL213C	TRM3	Q07527	1436 aa		2.95	□□□□□ -1.94
NOP6	YDL213C	VAR1	P02381	398 aa		2.95	□□□□□ -1.94
NOP6	YDL213C	YER039C-A	P0CD97	72 aa		2.95	□□□□□ -1.94
NOP6	YDL213C	DDR48	P18899	430 aa	Known RBP	2.95	□□□□□ -1.94
NOP6	YDL213C	YOR062C	P36025	268 aa		2.95	□□□□□ -1.94
NOP6	YDL213C	CTR2	P38865	189 aa		2.95	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms