RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W YKL102CP34249 101 aa1.6□□□□□ -2.15
SHR3YDL212W GPI17Q04080 534 aa1.6□□□□□ -2.15
SHR3YDL212W YLR031WQ07978 186 aa1.6□□□□□ -2.15
SHR3YDL212W YPR014CQ6B0W2 109 aa1.6□□□□□ -2.15
SHR3YDL212W YAR023CD6VPM8 179 aa1.59□□□□□ -2.15
SHR3YDL212W AIM2P39721 246 aa1.59□□□□□ -2.15
SHR3YDL212W YER134CP40081 178 aa1.59□□□□□ -2.15
SHR3YDL212W YGR042WP53227 271 aa1.59□□□□□ -2.15
SHR3YDL212W HSK3P69852 69 aa1.59□□□□□ -2.15
SHR3YDL212W TMA20P89886 181 aaPredicted RBP1.59□□□□□ -2.15
SHR3YDL212W YMR099CQ03161 297 aaKnown RBP1.59□□□□□ -2.15
SHR3YDL212W HPT1Q04178 221 aaKnown RBP1.59□□□□□ -2.15
SHR3YDL212W YOL014WQ08110 124 aa1.59□□□□□ -2.15
SHR3YDL212W YDL180WQ12301 547 aa1.59□□□□□ -2.15
SHR3YDL212W MPD1Q12404 318 aaKnown RBP1.59□□□□□ -2.15
SHR3YDL212W EFG1Q3E705 233 aaKnown RBP1.59□□□□□ -2.15
SHR3YDL212W PBI2P0CT04 75 aaKnown RBP1.58□□□□□ -2.16
SHR3YDL212W IDP1P21954 428 aaKnown RBP1.58□□□□□ -2.16
SHR3YDL212W PEX34P25584 144 aa1.58□□□□□ -2.16
SHR3YDL212W TVP38P36164 337 aa1.58□□□□□ -2.16
SHR3YDL212W SLM6P38343 150 aa1.58□□□□□ -2.16
SHR3YDL212W CYC2P38909 366 aa1.58□□□□□ -2.16
SHR3YDL212W TVP23P38962 199 aa1.58□□□□□ -2.16
SHR3YDL212W MOG1P47123 218 aa1.58□□□□□ -2.16
SHR3YDL212W YGL204CP53089 101 aa1.58□□□□□ -2.16
SHR3YDL212W PGA1P53896 198 aa1.58□□□□□ -2.16
SHR3YDL212W NAT3Q06504 195 aa1.58□□□□□ -2.16
SHR3YDL212W YPR202WQ08993 238 aa1.58□□□□□ -2.16
SHR3YDL212W UBC8P28263 218 aa1.57□□□□□ -2.16
SHR3YDL212W NUF2P33895 451 aa1.57□□□□□ -2.16
SHR3YDL212W GPI14P47088 403 aaKnown RBP1.57□□□□□ -2.16
SHR3YDL212W YGL101WP53144 215 aa1.57□□□□□ -2.16
SHR3YDL212W YOR342CQ12182 319 aa1.57□□□□□ -2.16
SHR3YDL212W YML100W-AQ8TGT0 57 aa1.57□□□□□ -2.16
SHR3YDL212W YOR1P53049 1477 aa1.56□□□□□ -2.16
SHR3YDL212W YPL073CP40323 161 aa1.56□□□□□ -2.16
SHR3YDL212W RFC2P40348 353 aa1.56□□□□□ -2.16
SHR3YDL212W TDA4P47153 279 aa1.56□□□□□ -2.16
SHR3YDL212W PKR1Q03880 122 aaKnown RBP1.56□□□□□ -2.16
SHR3YDL212W RAV2Q03956 351 aa1.56□□□□□ -2.16
SHR3YDL212W IRC23Q08416 157 aa1.56□□□□□ -2.16
SHR3YDL212W MSB2P32334 1306 aa1.56□□□□□ -2.16
SHR3YDL212W UBI4P0CG63 381 aaKnown RBP1.55□□□□□ -2.16
SHR3YDL212W PHO85P17157 305 aa1.55□□□□□ -2.16
SHR3YDL212W CSH1P38287 376 aa1.55□□□□□ -2.16
SHR3YDL212W YGR201CP42936 225 aa1.55□□□□□ -2.16
SHR3YDL212W YJR015WP47090 510 aa1.55□□□□□ -2.16
SHR3YDL212W SOL1P50278 321 aa1.55□□□□□ -2.16
SHR3YDL212W HHT1P61830 136 aa1.55□□□□□ -2.16
SHR3YDL212W THI74Q04083 370 aa1.55□□□□□ -2.16
SHR3YDL212W YLR046CQ12253 270 aa1.55□□□□□ -2.16
SHR3YDL212W IPI1P38803 334 aaPredicted RBP1.54□□□□□ -2.16
SHR3YDL212W APQ12P40532 138 aa1.54□□□□□ -2.16
SHR3YDL212W YFL019CP43576 117 aa1.54□□□□□ -2.16
SHR3YDL212W LSM3P57743 89 aaKnown RBP1.54□□□□□ -2.16
SHR3YDL212W UBC7Q02159 165 aa1.54□□□□□ -2.16
SHR3YDL212W YMR295CQ03559 197 aa1.54□□□□□ -2.16
SHR3YDL212W RNH202Q05635 350 aa1.54□□□□□ -2.16
SHR3YDL212W YPR174CQ06616 221 aaPredicted RBP1.54□□□□□ -2.16
SHR3YDL212W DAS2Q12084 232 aa1.54□□□□□ -2.16
SHR3YDL212W DGK1Q12382 290 aa1.54□□□□□ -2.16
SHR3YDL212W YNL146C-AQ3E7Z1 64 aa1.54□□□□□ -2.16
SHR3YDL212W MDM35O60200 86 aa1.53□□□□□ -2.16
SHR3YDL212W TIR1P10863 254 aa1.53□□□□□ -2.16
SHR3YDL212W NSP1P14907 823 aaKnown RBP1.53□□□□□ -2.16
SHR3YDL212W SFK1P35735 353 aa1.53□□□□□ -2.16
SHR3YDL212W YHL018WP38744 120 aaPredicted RBP1.53□□□□□ -2.16
SHR3YDL212W NSG1P38837 291 aa1.53□□□□□ -2.16
SHR3YDL212W TTI2P47168 421 aa1.53□□□□□ -2.16
SHR3YDL212W ORM1P53224 222 aa1.53□□□□□ -2.16
SHR3YDL212W TIM13P53299 105 aa1.53□□□□□ -2.16
SHR3YDL212W YHR007C-AQ07074 71 aa1.53□□□□□ -2.16
SHR3YDL212W RIB3Q99258 208 aa1.53□□□□□ -2.16
SHR3YDL212W RPL30P14120 105 aaKnown RBP1.52□□□□□ -2.17
SHR3YDL212W STP22P25604 385 aa1.52□□□□□ -2.17
SHR3YDL212W PAM17P36147 197 aa1.52□□□□□ -2.17
SHR3YDL212W RIO2P40160 425 aaKnown RBP1.52□□□□□ -2.17
SHR3YDL212W DLS1P40366 167 aa1.52□□□□□ -2.17
SHR3YDL212W FLX1P40464 311 aa1.52□□□□□ -2.17
SHR3YDL212W YAE1P47118 141 aaPredicted RBP1.52□□□□□ -2.17
SHR3YDL212W XPT1P47165 209 aa1.52□□□□□ -2.17
SHR3YDL212W RBL2P48606 106 aaKnown RBP1.52□□□□□ -2.17
SHR3YDL212W SBH1P52870 82 aa1.52□□□□□ -2.17
SHR3YDL212W VPS71Q03433 280 aa1.52□□□□□ -2.17
SHR3YDL212W PRP11Q07350 266 aaPredicted RBP1.52□□□□□ -2.17
SHR3YDL212W RFU1Q08003 200 aa1.52□□□□□ -2.17
SHR3YDL212W FYV12Q08559 129 aa1.52□□□□□ -2.17
SHR3YDL212W PST2Q12335 198 aaKnown RBP1.52□□□□□ -2.17
SHR3YDL212W YLR412C-AQ3E742 68 aa1.52□□□□□ -2.17
SHR3YDL212W YLR361C-AQ3E795 98 aa1.52□□□□□ -2.17
SHR3YDL212W TAF2P23255 1407 aa1.51□□□□□ -2.17
SHR3YDL212W CPR5P35176 225 aa1.51□□□□□ -2.17
SHR3YDL212W YNL033WP53964 284 aa1.51□□□□□ -2.17
SHR3YDL212W DAD4P69851 72 aa1.51□□□□□ -2.17
SHR3YDL212W SHH3Q04487 196 aa1.51□□□□□ -2.17
SHR3YDL212W YMR253CQ04835 414 aa1.51□□□□□ -2.17
SHR3YDL212W YDR278CQ05612 105 aa1.51□□□□□ -2.17
SHR3YDL212W COX8P04039 78 aa1.5□□□□□ -2.17
SHR3YDL212W NHP6AP11632 93 aaKnown RBP1.5□□□□□ -2.17
SHR3YDL212W SUA7P29055 345 aaPredicted RBP1.5□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 33.9 ms