RNA–Protein interactions for RNA: YDL049C

KNH1, Transcript of Protein with similarity to Kre9p, yeast

Gene KNH1, Length 807 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KNH1	YDL049C	MAK3	Q03503	176 aa		4.16	□□□□□ -1.74
KNH1	YDL049C	GRH1	Q04410	372 aa	Known RBP	4.16	□□□□□ -1.74
KNH1	YDL049C	SCW10	Q04951	389 aa		4.16	□□□□□ -1.74
KNH1	YDL049C	MSH5	Q12175	901 aa		4.16	□□□□□ -1.74
KNH1	YDL049C	IFM1	P25038	676 aa		4.15	□□□□□ -1.75
KNH1	YDL049C	ZRT1	P32804	376 aa		4.15	□□□□□ -1.75
KNH1	YDL049C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
KNH1	YDL049C	PHD1	P36093	366 aa		4.15	□□□□□ -1.75
KNH1	YDL049C	PCL6	P40038	420 aa		4.15	□□□□□ -1.75
KNH1	YDL049C	YIA6	P40556	373 aa		4.15	□□□□□ -1.75
KNH1	YDL049C	ILM1	P47155	203 aa		4.15	□□□□□ -1.75
KNH1	YDL049C	LST7	P53237	242 aa		4.15	□□□□□ -1.75
KNH1	YDL049C	CAF40	P53829	373 aa		4.15	□□□□□ -1.75
KNH1	YDL049C	CWC25	P53854	179 aa	Known RBP	4.15	□□□□□ -1.75
KNH1	YDL049C	YPL080C	Q02826	108 aa		4.15	□□□□□ -1.75
KNH1	YDL049C	LPP1	Q04396	274 aa		4.15	□□□□□ -1.75
KNH1	YDL049C	YOR292C	Q08743	309 aa		4.15	□□□□□ -1.75
KNH1	YDL049C	ODC2	Q99297	307 aa		4.15	□□□□□ -1.75
KNH1	YDL049C	RPN13	O13563	156 aa		4.14	□□□□□ -1.75
KNH1	YDL049C	MRS4	P23500	304 aa		4.14	□□□□□ -1.75
KNH1	YDL049C	RPS2	P25443	254 aa	Known RBP	4.14	□□□□□ -1.75
KNH1	YDL049C	COX15	P40086	486 aa		4.14	□□□□□ -1.75
KNH1	YDL049C	YJL218W	P40892	196 aa	Known RBP	4.14	□□□□□ -1.75
KNH1	YDL049C	SLX9	P53251	210 aa	Predicted RBP	4.14	□□□□□ -1.75
KNH1	YDL049C	NDE2	Q07500	545 aa		4.14	□□□□□ -1.75
KNH1	YDL049C	POM33	Q12164	279 aa		4.14	□□□□□ -1.75
KNH1	YDL049C	YLR365W	Q7LIF2	110 aa		4.14	□□□□□ -1.75
KNH1	YDL049C	RPL9A	P05738	191 aa	Known RBP	4.13	□□□□□ -1.75
KNH1	YDL049C	RPS18A	P0CX55	146 aa	Known RBP	4.13	□□□□□ -1.75
KNH1	YDL049C	RPS18B	P0CX56	146 aa	Predicted RBP	4.13	□□□□□ -1.75
KNH1	YDL049C	PET54	P10834	293 aa		4.13	□□□□□ -1.75
KNH1	YDL049C	ROX3	P25046	220 aa		4.13	□□□□□ -1.75
KNH1	YDL049C	BMT5	P40493	336 aa		4.13	□□□□□ -1.75
KNH1	YDL049C	YGR210C	P42942	411 aa		4.13	□□□□□ -1.75
KNH1	YDL049C	KEG1	P43614	200 aa		4.13	□□□□□ -1.75
KNH1	YDL049C	ALG9	P53868	555 aa	Known RBP	4.13	□□□□□ -1.75
KNH1	YDL049C	GIM5	Q04493	163 aa		4.13	□□□□□ -1.75
KNH1	YDL049C	ATG41	Q12048	136 aa		4.13	□□□□□ -1.75
KNH1	YDL049C	TPT1	Q12272	230 aa	Known RBP	4.13	□□□□□ -1.75
KNH1	YDL049C	YPR108W-A	Q3E7B3	70 aa		4.13	□□□□□ -1.75
KNH1	YDL049C	URA6	P15700	204 aa		4.12	□□□□□ -1.75
KNH1	YDL049C	YMR31	P19955	123 aa		4.12	□□□□□ -1.75
KNH1	YDL049C	TOA2	P32774	122 aa		4.12	□□□□□ -1.75
KNH1	YDL049C	SRY1	P36007	326 aa		4.12	□□□□□ -1.75
KNH1	YDL049C	MIC12	P38341	106 aa		4.12	□□□□□ -1.75
KNH1	YDL049C	SUR2	P38992	349 aa		4.12	□□□□□ -1.75
KNH1	YDL049C	SEC72	P39742	193 aa	Known RBP	4.12	□□□□□ -1.75
KNH1	YDL049C	FCY21	P40039	528 aa		4.12	□□□□□ -1.75
KNH1	YDL049C	MRPL49	P40858	161 aa	Predicted RBP	4.12	□□□□□ -1.75
KNH1	YDL049C	TAD2	P47058	250 aa		4.12	□□□□□ -1.75
KNH1	YDL049C	ERG25	P53045	309 aa		4.12	□□□□□ -1.75
KNH1	YDL049C	VHT1	P53241	593 aa		4.12	□□□□□ -1.75
KNH1	YDL049C	TDA1	Q03533	586 aa		4.12	□□□□□ -1.75
KNH1	YDL049C	YOL029C	Q08187	201 aa		4.12	□□□□□ -1.75
KNH1	YDL049C	BOL1	Q3E793	110 aa		4.12	□□□□□ -1.75
KNH1	YDL049C	HTB1	P02293	131 aa	Known RBP	4.11	□□□□□ -1.75
KNH1	YDL049C	SEN2	P16658	377 aa		4.11	□□□□□ -1.75
KNH1	YDL049C	HYM1	P32464	399 aa		4.11	□□□□□ -1.75
KNH1	YDL049C	GEP4	P38812	185 aa		4.11	□□□□□ -1.75
KNH1	YDL049C	RFC2	P40348	353 aa		4.11	□□□□□ -1.75
KNH1	YDL049C	YGR219W	P53307	113 aa		4.11	□□□□□ -1.75
KNH1	YDL049C	YDR274C	P87283	123 aa		4.11	□□□□□ -1.75
KNH1	YDL049C	TSA2	Q04120	196 aa		4.11	□□□□□ -1.75
KNH1	YDL049C	TIM18	Q08749	192 aa		4.11	□□□□□ -1.75
KNH1	YDL049C	YPL199C	Q08954	240 aa		4.11	□□□□□ -1.75
KNH1	YDL049C	YBR121C-A	P0C5L4	52 aa		4.1	□□□□□ -1.75
KNH1	YDL049C	GRX2	P17695	143 aa	Known RBP	4.1	□□□□□ -1.75
KNH1	YDL049C	RNA15	P25299	296 aa	Predicted RBP	4.1	□□□□□ -1.75
KNH1	YDL049C	TIP1	P27654	210 aa	Predicted RBP	4.1	□□□□□ -1.75
KNH1	YDL049C	COQ3	P27680	312 aa		4.1	□□□□□ -1.75
KNH1	YDL049C	MRPL38	P35996	138 aa	Predicted RBP	4.1	□□□□□ -1.75
KNH1	YDL049C	GOS1	P38736	223 aa		4.1	□□□□□ -1.75
KNH1	YDL049C	MPC2	P38857	129 aa		4.1	□□□□□ -1.75
KNH1	YDL049C	YNL194C	P40169	301 aa		4.1	□□□□□ -1.75
KNH1	YDL049C	YGR042W	P53227	271 aa		4.1	□□□□□ -1.75
KNH1	YDL049C	CRH1	P53301	507 aa		4.1	□□□□□ -1.75
KNH1	YDL049C	CPD1	P53314	239 aa		4.1	□□□□□ -1.75
KNH1	YDL049C	HCH1	P53834	153 aa		4.1	□□□□□ -1.75
KNH1	YDL049C	ODC1	Q03028	310 aa		4.1	□□□□□ -1.75
KNH1	YDL049C	YMR181C	Q03231	154 aa		4.1	□□□□□ -1.75
KNH1	YDL049C	RTT103	Q05543	409 aa		4.1	□□□□□ -1.75
KNH1	YDL049C	PDC2	P32896	925 aa		4.09	□□□□□ -1.75
KNH1	YDL049C	MED8	P38304	223 aa		4.09	□□□□□ -1.75
KNH1	YDL049C	ERG28	P40030	148 aa		4.09	□□□□□ -1.75
KNH1	YDL049C	PDS1	P40316	373 aa	Predicted RBP	4.09	□□□□□ -1.75
KNH1	YDL049C	SIM1	P40472	476 aa		4.09	□□□□□ -1.75
KNH1	YDL049C	DFG10	P40526	253 aa		4.09	□□□□□ -1.75
KNH1	YDL049C	YJR012C	P47087	207 aa		4.09	□□□□□ -1.75
KNH1	YDL049C	IRC23	Q08416	157 aa		4.09	□□□□□ -1.75
KNH1	YDL049C	HUG1	Q6Q5K6	68 aa		4.09	□□□□□ -1.75
KNH1	YDL049C	TAR1	Q8TGM6	124 aa		4.09	□□□□□ -1.75
KNH1	YDL049C	HTB2	P02294	131 aa		4.08	□□□□□ -1.76
KNH1	YDL049C	RPL16B	P26785	198 aa	Known RBP	4.08	□□□□□ -1.76
KNH1	YDL049C	SRL3	P36167	246 aa		4.08	□□□□□ -1.76
KNH1	YDL049C	ECM33	P38248	429 aa	Known RBP	4.08	□□□□□ -1.76
KNH1	YDL049C	RTC3	P38804	111 aa	Predicted RBP	4.08	□□□□□ -1.76
KNH1	YDL049C	RTS2	P40962	232 aa		4.08	□□□□□ -1.76
KNH1	YDL049C	KEI1	Q06346	221 aa		4.08	□□□□□ -1.76
KNH1	YDL049C	CTR3	Q06686	241 aa		4.08	□□□□□ -1.76
KNH1	YDL049C	CSM4	Q08955	156 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 63.3 ms