RNA–Protein interactions for RNA: YCR097W

HMRA1, Transcript of Silenced copy of a1 at HMR, yeastyeast

Gene HMRA1, Length 381 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HMRA1YCR097W ADO1P47143 340 aaKnown RBP-0.67□□□□□ -2.52
HMRA1YCR097W YLR283WQ05867 314 aa-0.67□□□□□ -2.52
HMRA1YCR097W MATALPHA1P0CY06 175 aa-0.68□□□□□ -2.52
HMRA1YCR097W HMLALPHA1P0CY07 175 aa-0.68□□□□□ -2.52
HMRA1YCR097W CNB1P25296 175 aa-0.68□□□□□ -2.52
HMRA1YCR097W VMA6P32366 345 aaKnown RBP-0.68□□□□□ -2.52
HMRA1YCR097W YCR087C-AP37263 153 aa-0.68□□□□□ -2.52
HMRA1YCR097W DML1Q03652 475 aa-0.68□□□□□ -2.52
HMRA1YCR097W AVO2Q04749 426 aa-0.68□□□□□ -2.52
HMRA1YCR097W ATG41Q12048 136 aa-0.68□□□□□ -2.52
HMRA1YCR097W YOR342CQ12182 319 aa-0.68□□□□□ -2.52
HMRA1YCR097W YOR034C-AQ3E735 80 aa-0.68□□□□□ -2.52
HMRA1YCR097W MBF1O14467 151 aaKnown RBP-0.69□□□□□ -2.52
HMRA1YCR097W RPL24BP24000 155 aaKnown RBP-0.69□□□□□ -2.52
HMRA1YCR097W YUH1P35127 236 aa-0.69□□□□□ -2.52
HMRA1YCR097W MIC12P38341 106 aa-0.69□□□□□ -2.52
HMRA1YCR097W RTR1P40084 226 aaPredicted RBP-0.69□□□□□ -2.52
HMRA1YCR097W APS3P47064 194 aa-0.69□□□□□ -2.52
HMRA1YCR097W PET117Q02771 107 aa-0.69□□□□□ -2.52
HMRA1YCR097W DAS2Q12084 232 aa-0.69□□□□□ -2.52
HMRA1YCR097W DUR1,2P32528 1835 aaKnown RBP-0.7□□□□□ -2.52
HMRA1YCR097W THP2O13539 261 aaKnown RBP-0.7□□□□□ -2.52
HMRA1YCR097W RHO1P06780 209 aaKnown RBP-0.7□□□□□ -2.52
HMRA1YCR097W RPS24AP0CX31 135 aaKnown RBP-0.7□□□□□ -2.52
HMRA1YCR097W RPS24BP0CX32 135 aaKnown RBP-0.7□□□□□ -2.52
HMRA1YCR097W GCY1P14065 312 aaKnown RBP RIP-Chip data-0.7□□□□□ -2.52not detected
HMRA1YCR097W ADE1P27616 306 aa-0.7□□□□□ -2.52
HMRA1YCR097W RIB7P33312 244 aa-0.7□□□□□ -2.52
HMRA1YCR097W YHR140WP38842 239 aa-0.7□□□□□ -2.52
HMRA1YCR097W CCC1P47818 322 aa-0.7□□□□□ -2.52
HMRA1YCR097W NAT3Q06504 195 aa-0.7□□□□□ -2.52
HMRA1YCR097W STE18P18852 110 aa-0.71□□□□□ -2.52
HMRA1YCR097W RFC4P40339 323 aaKnown RBP-0.71□□□□□ -2.52
HMRA1YCR097W SBH1P52870 82 aa-0.71□□□□□ -2.52
HMRA1YCR097W YLR031WQ07978 186 aa-0.71□□□□□ -2.52
HMRA1YCR097W YBR121C-AP0C5L4 52 aa-0.72□□□□□ -2.52
HMRA1YCR097W SPS18P32572 300 aa-0.72□□□□□ -2.52
HMRA1YCR097W PRP18P33411 251 aaPredicted RBP-0.72□□□□□ -2.52
HMRA1YCR097W YRA2P36036 203 aaKnown RBP RIP-Chip data-0.72□□□□□ -2.52not detected
HMRA1YCR097W YBR027CP38220 110 aa-0.72□□□□□ -2.52
HMRA1YCR097W NSA2P40078 261 aaKnown RBP-0.72□□□□□ -2.52
HMRA1YCR097W YFL019CP43576 117 aa-0.72□□□□□ -2.52
HMRA1YCR097W TMA22P47089 198 aaPredicted RBP-0.72□□□□□ -2.52
HMRA1YCR097W TDA4P47153 279 aa-0.72□□□□□ -2.52
HMRA1YCR097W YDL157CQ12082 118 aa-0.72□□□□□ -2.52
HMRA1YCR097W RRT1P38192 103 aa-0.73□□□□□ -2.53
HMRA1YCR097W GPI17Q04080 534 aa-0.73□□□□□ -2.53
HMRA1YCR097W YMR315WQ04869 349 aaKnown RBP-0.73□□□□□ -2.53
HMRA1YCR097W ATP20Q12233 115 aa-0.73□□□□□ -2.53
HMRA1YCR097W TAF2P23255 1407 aa-0.73□□□□□ -2.53
HMRA1YCR097W TAF14P35189 244 aa-0.74□□□□□ -2.53
HMRA1YCR097W YRB1P41920 201 aaKnown RBP-0.74□□□□□ -2.53
HMRA1YCR097W GEP7P53171 287 aa-0.74□□□□□ -2.53
HMRA1YCR097W NRK1P53915 240 aa-0.74□□□□□ -2.53
HMRA1YCR097W YMR321CQ04898 105 aa-0.74□□□□□ -2.53
HMRA1YCR097W YJL009WP47078 108 aa-0.75□□□□□ -2.53
HMRA1YCR097W FMN1Q03778 218 aa-0.75□□□□□ -2.53
HMRA1YCR097W RIM9Q04734 239 aa-0.75□□□□□ -2.53
HMRA1YCR097W RNH1Q04740 348 aa-0.75□□□□□ -2.53
HMRA1YCR097W YKL183C-AQ3E765 70 aa-0.75□□□□□ -2.53
HMRA1YCR097W HSP30P25619 332 aa-0.76□□□□□ -2.53
HMRA1YCR097W RTC3P38804 111 aaPredicted RBP-0.76□□□□□ -2.53
HMRA1YCR097W NSG1P38837 291 aa-0.76□□□□□ -2.53
HMRA1YCR097W YNL194CP40169 301 aa-0.76□□□□□ -2.53
HMRA1YCR097W SOL1P50278 321 aa-0.76□□□□□ -2.53
HMRA1YCR097W YML079WQ03629 201 aa-0.76□□□□□ -2.53
HMRA1YCR097W YLR412C-AQ3E742 68 aa-0.76□□□□□ -2.53
HMRA1YCR097W YOR381W-AQ3E804 55 aa-0.76□□□□□ -2.53
HMRA1YCR097W RIF1P29539 1916 aa-0.77□□□□□ -2.53
HMRA1YCR097W YDR157WA0A023PZE8 133 aa-0.77□□□□□ -2.53
HMRA1YCR097W RPS25BP0C0T4 108 aaKnown RBP-0.77□□□□□ -2.53
HMRA1YCR097W YGR269WP40326 108 aa-0.77□□□□□ -2.53
HMRA1YCR097W RTC4P53850 401 aa-0.77□□□□□ -2.53
HMRA1YCR097W RPS25AQ3E792 108 aaPredicted RBP-0.77□□□□□ -2.53
HMRA1YCR097W BLM10P43583 2143 aa-0.77□□□□□ -2.53
HMRA1YCR097W MRS1P07266 363 aa-0.78□□□□□ -2.53
HMRA1YCR097W DDR48P18899 430 aaKnown RBP-0.78□□□□□ -2.53
HMRA1YCR097W HYP2P23301 157 aaKnown RBP-0.78□□□□□ -2.53
HMRA1YCR097W CBT1P36038 271 aaPredicted RBP-0.78□□□□□ -2.53
HMRA1YCR097W YER085CP40058 173 aa-0.78□□□□□ -2.53
HMRA1YCR097W MVB12P42939 101 aa-0.78□□□□□ -2.53
HMRA1YCR097W VPS28Q02767 242 aa-0.78□□□□□ -2.53
HMRA1YCR097W GAL83Q04739 417 aa-0.78□□□□□ -2.53
HMRA1YCR097W RUD3Q12234 484 aaKnown RBP-0.78□□□□□ -2.53
HMRA1YCR097W SNF2P22082 1703 aa-0.78□□□□□ -2.53
HMRA1YCR097W CDC33P07260 213 aaKnown RBP-0.79□□□□□ -2.54
HMRA1YCR097W NHP6BP11633 99 aaKnown RBP-0.79□□□□□ -2.54
HMRA1YCR097W CAF4P36130 643 aa-0.79□□□□□ -2.54
HMRA1YCR097W ECM31P38122 312 aa-0.79□□□□□ -2.54
HMRA1YCR097W COA6Q3E846 104 aa-0.79□□□□□ -2.54
HMRA1YCR097W YPR014CQ6B0W2 109 aa-0.79□□□□□ -2.54
HMRA1YCR097W NCB2Q92317 146 aa-0.79□□□□□ -2.54
HMRA1YCR097W FMP23P38231 175 aa-0.8□□□□□ -2.54
HMRA1YCR097W IKI1P38874 309 aa-0.8□□□□□ -2.54
HMRA1YCR097W YEL014CP39999 101 aa-0.8□□□□□ -2.54
HMRA1YCR097W RAD17P48581 401 aa-0.8□□□□□ -2.54
HMRA1YCR097W IRC21Q04772 201 aa-0.8□□□□□ -2.54
HMRA1YCR097W YLR422WQ06409 1932 aa-0.81□□□□□ -2.54
HMRA1YCR097W PHO13P19881 312 aa-0.81□□□□□ -2.54
HMRA1YCR097W SPT14P32363 452 aa-0.81□□□□□ -2.54
Retrieved 100 of 5,963 RNA–protein pairs in 814.4 ms