RNA–Protein interactions for RNA: YCR084C

TUP1, Transcript of General repressor of transcription, yeastyeast

Gene TUP1, Length 2,142 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TUP1YCR084C PET191Q02772 108 aa4.39□□□□□ -1.71
TUP1YCR084C ASM4Q05166 528 aa4.39□□□□□ -1.71
TUP1YCR084C YLR030WQ07967 263 aa4.39□□□□□ -1.71
TUP1YCR084C PRR2Q12310 699 aa4.39□□□□□ -1.71
TUP1YCR084C RPS25AQ3E792 108 aaPredicted RBP4.39□□□□□ -1.71
TUP1YCR084C STT4P37297 1900 aa4.39□□□□□ -1.71
TUP1YCR084C TRX3P25372 127 aa4.39□□□□□ -1.71
TUP1YCR084C SOR1P35497 357 aaKnown RBP4.39□□□□□ -1.71
TUP1YCR084C IRC22P40006 225 aa4.39□□□□□ -1.71
TUP1YCR084C EST3Q03096 181 aa4.39□□□□□ -1.71
TUP1YCR084C YDR209CQ03480 137 aa4.39□□□□□ -1.71
TUP1YCR084C ERP1Q05359 219 aaKnown RBP4.39□□□□□ -1.71
TUP1YCR084C YPR114WQ06107 315 aa4.39□□□□□ -1.71
TUP1YCR084C PIN3Q06449 215 aa4.39□□□□□ -1.71
TUP1YCR084C SOR2Q07786 357 aa4.39□□□□□ -1.71
TUP1YCR084C TEN1Q07921 160 aa4.39□□□□□ -1.71
TUP1YCR084C CSI2Q08054 341 aa4.39□□□□□ -1.71
TUP1YCR084C NAT5Q08689 176 aa4.39□□□□□ -1.71
TUP1YCR084C LAS17Q12446 633 aa4.39□□□□□ -1.71
TUP1YCR084C YPL229WQ99395 206 aa4.39□□□□□ -1.71
TUP1YCR084C ADH1P00330 348 aaKnown RBP4.38□□□□□ -1.71
TUP1YCR084C OPI3P05375 206 aa4.38□□□□□ -1.71
TUP1YCR084C PAU19P0CE85 124 aa4.38□□□□□ -1.71
TUP1YCR084C PAU21P0CE86 164 aa4.38□□□□□ -1.71
TUP1YCR084C PAU22P0CE87 164 aa4.38□□□□□ -1.71
TUP1YCR084C HYP2P23301 157 aaKnown RBP4.38□□□□□ -1.71
TUP1YCR084C PAU3P25610 124 aa4.38□□□□□ -1.71
TUP1YCR084C PAU2P32612 120 aa4.38□□□□□ -1.71
TUP1YCR084C YBL081WP38180 368 aaKnown RBP4.38□□□□□ -1.71
TUP1YCR084C APQ12P40532 138 aa4.38□□□□□ -1.71
TUP1YCR084C MUP1P50276 574 aa4.38□□□□□ -1.71
TUP1YCR084C HST4P53688 370 aa4.38□□□□□ -1.71
TUP1YCR084C FCF1Q05498 189 aaPredicted RBP4.38□□□□□ -1.71
TUP1YCR084C RRT7Q07829 113 aa4.38□□□□□ -1.71
TUP1YCR084C YPQ1Q12010 308 aa4.38□□□□□ -1.71
TUP1YCR084C RPL7BQ12213 244 aaKnown RBP4.38□□□□□ -1.71
TUP1YCR084C COX19Q3E731 98 aa4.38□□□□□ -1.71
TUP1YCR084C FMP49A0A023PZB3 126 aa4.37□□□□□ -1.71
TUP1YCR084C SLM5P25345 492 aaKnown RBP4.37□□□□□ -1.71
TUP1YCR084C SWD2P36104 329 aaPredicted RBP4.37□□□□□ -1.71
TUP1YCR084C YER188WP40103 239 aa4.37□□□□□ -1.71
TUP1YCR084C SFT1P43682 97 aa4.37□□□□□ -1.71
TUP1YCR084C BET5Q03630 159 aa4.37□□□□□ -1.71
TUP1YCR084C NDD1Q08887 554 aa4.37□□□□□ -1.71
TUP1YCR084C MCP1Q12106 302 aa4.37□□□□□ -1.71
TUP1YCR084C YDL009CQ12210 107 aa4.37□□□□□ -1.71
TUP1YCR084C IGO2Q9P305 131 aa4.37□□□□□ -1.71
TUP1YCR084C TIR1P10863 254 aa4.37□□□□□ -1.71
TUP1YCR084C MDM10P18409 493 aa4.37□□□□□ -1.71
TUP1YCR084C ANB1P19211 157 aa4.37□□□□□ -1.71
TUP1YCR084C YBR090CP38253 122 aa4.37□□□□□ -1.71
TUP1YCR084C RPL14BP38754 138 aaKnown RBP4.37□□□□□ -1.71
TUP1YCR084C SPC25P40014 221 aa4.37□□□□□ -1.71
TUP1YCR084C AVT7P40501 490 aa4.37□□□□□ -1.71
TUP1YCR084C YIL029CP40538 142 aa4.37□□□□□ -1.71
TUP1YCR084C YGL230CP53074 147 aa4.37□□□□□ -1.71
TUP1YCR084C CAB4P53332 305 aa4.37□□□□□ -1.71
TUP1YCR084C PGA1P53896 198 aa4.37□□□□□ -1.71
TUP1YCR084C AIM11P87275 137 aa4.37□□□□□ -1.71
TUP1YCR084C YPL062WQ02781 134 aa4.37□□□□□ -1.71
TUP1YCR084C THI74Q04083 370 aa4.37□□□□□ -1.71
TUP1YCR084C NMA1Q06178 401 aaKnown RBP4.37□□□□□ -1.71
TUP1YCR084C ARR3Q06598 404 aa4.37□□□□□ -1.71
TUP1YCR084C SME1Q12330 94 aaPredicted RBP4.37□□□□□ -1.71
TUP1YCR084C YLR146W-AQ2V2P1 62 aa4.37□□□□□ -1.71
TUP1YCR084C YOS1Q3E834 85 aa4.37□□□□□ -1.71
TUP1YCR084C CNE1P27825 502 aa4.36□□□□□ -1.71
TUP1YCR084C FMT1P32785 401 aa4.36□□□□□ -1.71
TUP1YCR084C MBB1P39534 108 aa4.36□□□□□ -1.71
TUP1YCR084C YIL152WP40455 235 aa4.36□□□□□ -1.71
TUP1YCR084C BNS1P50084 137 aa4.36□□□□□ -1.71
TUP1YCR084C CPD1P53314 239 aa4.36□□□□□ -1.71
TUP1YCR084C DUG3P53871 357 aa4.36□□□□□ -1.71
TUP1YCR084C ADD37Q03233 198 aa4.36□□□□□ -1.71
TUP1YCR084C VPS71Q03433 280 aa4.36□□□□□ -1.71
TUP1YCR084C YOR385WQ08909 290 aa4.36□□□□□ -1.71
TUP1YCR084C NCE102Q12207 173 aaRIP-Chip data4.36□□□□□ -1.71not detected
TUP1YCR084C YFL068WP0CX99 160 aa4.36□□□□□ -1.71
TUP1YCR084C YLL066W-AP0CY00 160 aa4.36□□□□□ -1.71
TUP1YCR084C YLL067W-AP0CY01 160 aa4.36□□□□□ -1.71
TUP1YCR084C RPS2P25443 254 aaKnown RBP4.36□□□□□ -1.71
TUP1YCR084C MRPS9P38120 278 aa4.36□□□□□ -1.71
TUP1YCR084C NSA2P40078 261 aaKnown RBP4.36□□□□□ -1.71
TUP1YCR084C CDC1P40986 491 aa4.36□□□□□ -1.71
TUP1YCR084C OST2P46964 130 aa4.36□□□□□ -1.71
TUP1YCR084C MSY1P48527 492 aa4.36□□□□□ -1.71
TUP1YCR084C YGL262WP53054 175 aa4.36□□□□□ -1.71
TUP1YCR084C THG1P53215 237 aaKnown RBP4.36□□□□□ -1.71
TUP1YCR084C SDC1Q03323 175 aa4.36□□□□□ -1.71
TUP1YCR084C YCR007CP25354 239 aa4.35□□□□□ -1.71
TUP1YCR084C YMC1P32331 307 aa4.35□□□□□ -1.71
TUP1YCR084C ERG24P32462 438 aaKnown RBP4.35□□□□□ -1.71
TUP1YCR084C ALK2P32789 676 aaPredicted RBP4.35□□□□□ -1.71
TUP1YCR084C YNL195CP40168 261 aa4.35□□□□□ -1.71
TUP1YCR084C ATP23P53722 227 aa4.35□□□□□ -1.71
TUP1YCR084C NAT3Q06504 195 aa4.35□□□□□ -1.71
TUP1YCR084C MCH4Q08268 501 aa4.35□□□□□ -1.71
TUP1YCR084C YDR215CQ12240 137 aa4.35□□□□□ -1.71
TUP1YCR084C RPL13AQ12690 199 aaPredicted RBP4.35□□□□□ -1.71
TUP1YCR084C YPR096CO13587 100 aa4.34□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms