RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W URA5P13298 226 aaKnown RBP2.19□□□□□ -2.06
SWD3YBR175W OCH1P31755 480 aa2.19□□□□□ -2.06
SWD3YBR175W YBR285WP38354 144 aa2.19□□□□□ -2.06
SWD3YBR175W YHR125WP38831 101 aa2.19□□□□□ -2.06
SWD3YBR175W AIM2P39721 246 aa2.19□□□□□ -2.06
SWD3YBR175W AVT2P39981 480 aa2.19□□□□□ -2.06
SWD3YBR175W YEA4P40004 342 aa2.19□□□□□ -2.06
SWD3YBR175W TIF34P40217 347 aaKnown RBP2.19□□□□□ -2.06
SWD3YBR175W APQ12P40532 138 aa2.19□□□□□ -2.06
SWD3YBR175W CIN5P40917 295 aa2.19□□□□□ -2.06
SWD3YBR175W PHB1P40961 287 aa2.19□□□□□ -2.06
SWD3YBR175W GPI14P47088 403 aaKnown RBP2.19□□□□□ -2.06
SWD3YBR175W TDA4P47153 279 aa2.19□□□□□ -2.06
SWD3YBR175W VMA10P48836 114 aaKnown RBP2.19□□□□□ -2.06
SWD3YBR175W ORM1P53224 222 aa2.19□□□□□ -2.06
SWD3YBR175W HHT1P61830 136 aa2.19□□□□□ -2.06
SWD3YBR175W CSN9Q03981 162 aa2.19□□□□□ -2.06
SWD3YBR175W THI74Q04083 370 aa2.19□□□□□ -2.06
SWD3YBR175W FCF1Q05498 189 aaPredicted RBP2.19□□□□□ -2.06
SWD3YBR175W YDL180WQ12301 547 aa2.19□□□□□ -2.06
SWD3YBR175W IES3Q12345 250 aa2.19□□□□□ -2.06
SWD3YBR175W DGK1Q12382 290 aa2.19□□□□□ -2.06
SWD3YBR175W RIB3Q99258 208 aa2.19□□□□□ -2.06
SWD3YBR175W FKS1P38631 1876 aaKnown RBP2.18□□□□□ -2.06
SWD3YBR175W NHP6AP11632 93 aaKnown RBP2.18□□□□□ -2.06
SWD3YBR175W ATP15P21306 62 aa2.18□□□□□ -2.06
SWD3YBR175W ARC15P40518 154 aaRIP-Chip data2.18□□□□□ -2.06not detected
SWD3YBR175W SER2P42941 309 aa2.18□□□□□ -2.06
SWD3YBR175W OST2P46964 130 aa2.18□□□□□ -2.06
SWD3YBR175W TTI2P47168 421 aa2.18□□□□□ -2.06
SWD3YBR175W DYN2Q02647 92 aa2.18□□□□□ -2.06
SWD3YBR175W YMR320WQ04897 101 aa2.18□□□□□ -2.06
SWD3YBR175W YOL014WQ08110 124 aa2.18□□□□□ -2.06
SWD3YBR175W YDR034W-BQ6Q5X2 51 aa2.18□□□□□ -2.06
SWD3YBR175W UTP20P35194 2493 aaKnown RBP2.18□□□□□ -2.06
SWD3YBR175W TY1B-DR3Q99231 1755 aa2.18□□□□□ -2.06
SWD3YBR175W FMP27Q06179 2628 aa2.18□□□□□ -2.06
SWD3YBR175W CDC8P00572 216 aa2.17□□□□□ -2.06
SWD3YBR175W RPL9AP05738 191 aaKnown RBP2.17□□□□□ -2.06
SWD3YBR175W RPL30P14120 105 aaKnown RBP2.17□□□□□ -2.06
SWD3YBR175W CCA1P21269 546 aa2.17□□□□□ -2.06
SWD3YBR175W PCL1P24867 279 aa2.17□□□□□ -2.06
SWD3YBR175W STP22P25604 385 aa2.17□□□□□ -2.06
SWD3YBR175W SUA7P29055 345 aaPredicted RBP2.17□□□□□ -2.06
SWD3YBR175W OPY1P38271 328 aa2.17□□□□□ -2.06
SWD3YBR175W PRS3P38689 320 aaKnown RBP2.17□□□□□ -2.06
SWD3YBR175W NSG1P38837 291 aa2.17□□□□□ -2.06
SWD3YBR175W DLS1P40366 167 aa2.17□□□□□ -2.06
SWD3YBR175W GON7P46984 123 aa2.17□□□□□ -2.06
SWD3YBR175W SNX4P47057 423 aa2.17□□□□□ -2.06
SWD3YBR175W XPT1P47165 209 aa2.17□□□□□ -2.06
SWD3YBR175W RPL9BP51401 191 aaKnown RBP2.17□□□□□ -2.06
SWD3YBR175W RCF2P53721 224 aa2.17□□□□□ -2.06
SWD3YBR175W UBC7Q02159 165 aa2.17□□□□□ -2.06
SWD3YBR175W AKR2Q12013 749 aa2.17□□□□□ -2.06
SWD3YBR175W PST2Q12335 198 aaKnown RBP2.17□□□□□ -2.06
SWD3YBR175W YML100W-AQ8TGT0 57 aa2.17□□□□□ -2.06
SWD3YBR175W FAB1P34756 2278 aa2.17□□□□□ -2.06
SWD3YBR175W PRP8P33334 2413 aaKnown RBP2.17□□□□□ -2.06
SWD3YBR175W RAD50P12753 1312 aa2.17□□□□□ -2.06
SWD3YBR175W TIM9O74700 87 aa2.16□□□□□ -2.06
SWD3YBR175W HSP26P15992 214 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
SWD3YBR175W YEL045CP32616 141 aa2.16□□□□□ -2.06
SWD3YBR175W VMA11P32842 164 aa2.16□□□□□ -2.06
SWD3YBR175W TKL2P33315 681 aa2.16□□□□□ -2.06
SWD3YBR175W YER188WP40103 239 aa2.16□□□□□ -2.06
SWD3YBR175W YFL019CP43576 117 aa2.16□□□□□ -2.06
SWD3YBR175W YFR045WP43617 309 aa2.16□□□□□ -2.06
SWD3YBR175W BUD13P46947 266 aaPredicted RBP2.16□□□□□ -2.06
SWD3YBR175W HAL1Q01766 294 aa2.16□□□□□ -2.06
SWD3YBR175W HRD1Q08109 551 aa2.16□□□□□ -2.06
SWD3YBR175W CAT8P39113 1433 aa2.16□□□□□ -2.06
SWD3YBR175W RPO41P13433 1351 aaKnown RBP2.15□□□□□ -2.07
SWD3YBR175W YHR032W-AP0C5N6 59 aa2.15□□□□□ -2.07
SWD3YBR175W NOP1P15646 327 aaKnown RBP2.15□□□□□ -2.07
SWD3YBR175W PAN3P36102 679 aaPredicted RBP2.15□□□□□ -2.07
SWD3YBR175W MRPL17P36528 281 aa2.15□□□□□ -2.07
SWD3YBR175W CTR2P38865 189 aa2.15□□□□□ -2.07
SWD3YBR175W FCY21P40039 528 aa2.15□□□□□ -2.07
SWD3YBR175W YER134CP40081 178 aa2.15□□□□□ -2.07
SWD3YBR175W PRE5P40302 234 aaKnown RBP2.15□□□□□ -2.07
SWD3YBR175W YPL073CP40323 161 aa2.15□□□□□ -2.07
SWD3YBR175W YFL012WP43580 148 aa2.15□□□□□ -2.07
SWD3YBR175W ECO1P43605 281 aa2.15□□□□□ -2.07
SWD3YBR175W CCC1P47818 322 aa2.15□□□□□ -2.07
SWD3YBR175W DSK2P48510 373 aa2.15□□□□□ -2.07
SWD3YBR175W TSA2Q04120 196 aa2.15□□□□□ -2.07
SWD3YBR175W PIN3Q06449 215 aa2.15□□□□□ -2.07
SWD3YBR175W NAT3Q06504 195 aa2.15□□□□□ -2.07
SWD3YBR175W TMC1Q08422 150 aaPredicted RBP2.15□□□□□ -2.07
SWD3YBR175W YLR412C-AQ3E742 68 aa2.15□□□□□ -2.07
SWD3YBR175W NUP188P52593 1655 aaKnown RBP2.15□□□□□ -2.07
SWD3YBR175W HIS3P06633 220 aa2.14□□□□□ -2.07
SWD3YBR175W RPL40AP0CH08 128 aaKnown RBP2.14□□□□□ -2.07
SWD3YBR175W RPL40BP0CH09 128 aaKnown RBP2.14□□□□□ -2.07
SWD3YBR175W SCL1P21243 252 aaKnown RBP2.14□□□□□ -2.07
SWD3YBR175W VTC1P40046 129 aaRIP-Chip data2.14□□□□□ -2.07not detected
SWD3YBR175W SMD3P43321 101 aaKnown RBP2.14□□□□□ -2.07
SWD3YBR175W AIF1P52923 378 aa2.14□□□□□ -2.07
SWD3YBR175W YGR026WP53217 278 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 43.2 ms