RNA–Protein interactions for RNA: YBR058C-A

TSC3, Transcript of Protein that stimulates the activity of serine palmitoyltransferase, yeastyeast

Gene TSC3, Length 243 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSC3YBR058C-A YLR031WQ07978 186 aa0.32□□□□□ -2.36
TSC3YBR058C-A YOR015WQ12169 119 aa0.32□□□□□ -2.36
TSC3YBR058C-A RUD3Q12234 484 aaKnown RBP0.32□□□□□ -2.36
TSC3YBR058C-A RIF1P29539 1916 aa0.32□□□□□ -2.36
TSC3YBR058C-A ATP20Q12233 115 aa0.31□□□□□ -2.36
TSC3YBR058C-A ADF1Q2V2Q1 113 aa0.31□□□□□ -2.36
TSC3YBR058C-A PIR1Q03178 341 aa0.3□□□□□ -2.36
TSC3YBR058C-A ARO80Q04052 950 aa0.3□□□□□ -2.36
TSC3YBR058C-A DAS2Q12084 232 aa0.3□□□□□ -2.36
TSC3YBR058C-A TMA22P47089 198 aaPredicted RBP0.29□□□□□ -2.36
TSC3YBR058C-A SBH2P52871 88 aa0.29□□□□□ -2.36
TSC3YBR058C-A YHP1Q04116 353 aa0.29□□□□□ -2.36
TSC3YBR058C-A QCR7P00128 127 aa0.28□□□□□ -2.36
TSC3YBR058C-A RRT1P38192 103 aa0.28□□□□□ -2.36
TSC3YBR058C-A NSG1P38837 291 aa0.28□□□□□ -2.36
TSC3YBR058C-A YJR015WP47090 510 aa0.28□□□□□ -2.36
TSC3YBR058C-A DML1Q03652 475 aa0.28□□□□□ -2.36
TSC3YBR058C-A YOR342CQ12182 319 aa0.28□□□□□ -2.36
TSC3YBR058C-A YMR030W-AQ3E760 96 aa0.28□□□□□ -2.36
TSC3YBR058C-A IGO2Q9P305 131 aa0.28□□□□□ -2.36
TSC3YBR058C-A CBF1P17106 351 aa0.27□□□□□ -2.37
TSC3YBR058C-A NTG1P31378 399 aa0.27□□□□□ -2.37
TSC3YBR058C-A YKR070WP36151 352 aaKnown RBP0.27□□□□□ -2.37
TSC3YBR058C-A NRK1P53915 240 aa0.27□□□□□ -2.37
TSC3YBR058C-A TMA23Q03525 211 aa0.27□□□□□ -2.37
TSC3YBR058C-A RNH1Q04740 348 aa0.27□□□□□ -2.37
TSC3YBR058C-A DGK1Q12382 290 aa0.27□□□□□ -2.37
TSC3YBR058C-A YLR412C-AQ3E742 68 aa0.27□□□□□ -2.37
TSC3YBR058C-A YOL013W-AP0C272 63 aaPredicted RBP0.26□□□□□ -2.37
TSC3YBR058C-A RPS24AP0CX31 135 aaKnown RBP0.26□□□□□ -2.37
TSC3YBR058C-A RPS24BP0CX32 135 aaKnown RBP0.26□□□□□ -2.37
TSC3YBR058C-A MAK31P23059 88 aa0.26□□□□□ -2.37
TSC3YBR058C-A ADE1P27616 306 aa0.26□□□□□ -2.37
TSC3YBR058C-A NSA2P40078 261 aaKnown RBP0.26□□□□□ -2.37
TSC3YBR058C-A CCS1P40202 249 aaKnown RBP0.26□□□□□ -2.37
TSC3YBR058C-A ATG41Q12048 136 aa0.26□□□□□ -2.37
TSC3YBR058C-A YOR381W-AQ3E804 55 aa0.26□□□□□ -2.37
TSC3YBR058C-A HFA1P32874 2273 aa0.25□□□□□ -2.37
TSC3YBR058C-A MATALPHA2P0CY08 210 aa0.25□□□□□ -2.37
TSC3YBR058C-A HMLALPHA2P0CY09 210 aa0.25□□□□□ -2.37
TSC3YBR058C-A SHB17P36136 271 aaKnown RBP0.25□□□□□ -2.37
TSC3YBR058C-A YGL230CP53074 147 aa0.25□□□□□ -2.37
TSC3YBR058C-A PGA1P53896 198 aa0.25□□□□□ -2.37
TSC3YBR058C-A SED1Q01589 338 aa0.25□□□□□ -2.37
TSC3YBR058C-A GAL83Q04739 417 aa0.25□□□□□ -2.37
TSC3YBR058C-A KEI1Q06346 221 aa0.24□□□□□ -2.37
TSC3YBR058C-A SBH1P52870 82 aa0.23□□□□□ -2.37
TSC3YBR058C-A RTC4P53850 401 aa0.23□□□□□ -2.37
TSC3YBR058C-A TIM11P81449 96 aaPredicted RBP0.23□□□□□ -2.37
TSC3YBR058C-A YDC1Q02896 317 aa0.23□□□□□ -2.37
TSC3YBR058C-A MRPS17Q03246 237 aaPredicted RBP0.23□□□□□ -2.37
TSC3YBR058C-A AVO2Q04749 426 aa0.23□□□□□ -2.37
TSC3YBR058C-A YOL024WQ08172 172 aa0.23□□□□□ -2.37
TSC3YBR058C-A RPB4P20433 221 aaPredicted RBP0.22□□□□□ -2.37
TSC3YBR058C-A FYV4P38783 130 aaPredicted RBP0.22□□□□□ -2.37
TSC3YBR058C-A HHY1P39982 102 aa0.22□□□□□ -2.37
TSC3YBR058C-A RIM9Q04734 239 aa0.22□□□□□ -2.37
TSC3YBR058C-A YPR014CQ6B0W2 109 aa0.22□□□□□ -2.37
TSC3YBR058C-A JIP3O13555 125 aa0.21□□□□□ -2.38
TSC3YBR058C-A YCR001WP25347 104 aa0.21□□□□□ -2.38
TSC3YBR058C-A HHT1P61830 136 aa0.21□□□□□ -2.38
TSC3YBR058C-A YRA2P36036 203 aaKnown RBP RIP-Chip data0.2□□□□□ -2.38not detected
TSC3YBR058C-A YNL200CP40165 246 aaKnown RBP0.2□□□□□ -2.38
TSC3YBR058C-A AIM34Q03673 198 aa0.2□□□□□ -2.38
TSC3YBR058C-A NOC4Q06512 552 aaPredicted RBP0.2□□□□□ -2.38
TSC3YBR058C-A TAH1P25638 111 aaPredicted RBP0.19□□□□□ -2.38
TSC3YBR058C-A CPR5P35176 225 aa0.19□□□□□ -2.38
TSC3YBR058C-A MPD1Q12404 318 aaKnown RBP0.19□□□□□ -2.38
TSC3YBR058C-A YDL085C-AQ3E7B7 68 aaKnown RBP0.19□□□□□ -2.38
TSC3YBR058C-A YHR213W-BQ8TGK1 99 aa0.19□□□□□ -2.38
TSC3YBR058C-A KIN28P06242 306 aa0.18□□□□□ -2.38
TSC3YBR058C-A SEC14P24280 304 aaKnown RBP0.18□□□□□ -2.38
TSC3YBR058C-A HSP30P25619 332 aa0.18□□□□□ -2.38
TSC3YBR058C-A YKT6P36015 200 aaKnown RBP0.18□□□□□ -2.38
TSC3YBR058C-A POG1P40473 351 aa0.18□□□□□ -2.38
TSC3YBR058C-A YKR005CQ02203 525 aa0.18□□□□□ -2.38
TSC3YBR058C-A FCY1Q12178 158 aa0.18□□□□□ -2.38
TSC3YBR058C-A PAC10P48363 199 aa0.17□□□□□ -2.38
TSC3YBR058C-A PRM3Q08931 133 aa0.17□□□□□ -2.38
TSC3YBR058C-A RAD9P14737 1309 aa0.16□□□□□ -2.38
TSC3YBR058C-A PRE1P22141 198 aaKnown RBP0.16□□□□□ -2.38
TSC3YBR058C-A TRX3P25372 127 aa0.16□□□□□ -2.38
TSC3YBR058C-A AHC2P25649 128 aa0.16□□□□□ -2.38
TSC3YBR058C-A YKL102CP34249 101 aa0.16□□□□□ -2.38
TSC3YBR058C-A SOL1P50278 321 aa0.16□□□□□ -2.38
TSC3YBR058C-A VPS28Q02767 242 aa0.16□□□□□ -2.38
TSC3YBR058C-A GRX5Q02784 150 aa0.16□□□□□ -2.38
TSC3YBR058C-A GPI17Q04080 534 aa0.16□□□□□ -2.38
TSC3YBR058C-A GRX8Q05926 109 aa0.16□□□□□ -2.38
TSC3YBR058C-A SHH4Q06236 168 aa0.16□□□□□ -2.38
TSC3YBR058C-A YPR127WQ06494 345 aa0.16□□□□□ -2.38
TSC3YBR058C-A BRX1Q08235 291 aaKnown RBP0.16□□□□□ -2.38
TSC3YBR058C-A YKR041WP36134 250 aa0.15□□□□□ -2.39
TSC3YBR058C-A RFC2P40348 353 aa0.15□□□□□ -2.39
TSC3YBR058C-A MOB1P40484 314 aa0.15□□□□□ -2.39
TSC3YBR058C-A FMP32P43557 207 aa0.15□□□□□ -2.39
TSC3YBR058C-A TAF2P23255 1407 aa0.14□□□□□ -2.39
TSC3YBR058C-A GCY1P14065 312 aaKnown RBP RIP-Chip data0.14□□□□□ -2.39not detected
TSC3YBR058C-A CLG1P35190 452 aa0.14□□□□□ -2.39
TSC3YBR058C-A YGR269WP40326 108 aa0.14□□□□□ -2.39
Retrieved 100 of 5,963 RNA–protein pairs in 32.4 ms