RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeastyeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTG3YBL103C DLS1P40366 167 aa1.79□□□□□ -2.12
RTG3YBL103C AGE2P40529 298 aa1.79□□□□□ -2.12
RTG3YBL103C CIS3P47001 227 aa1.79□□□□□ -2.12
RTG3YBL103C YGR219WP53307 113 aa1.79□□□□□ -2.12
RTG3YBL103C DIG2Q03373 323 aaKnown RBP1.79□□□□□ -2.12
RTG3YBL103C YMR295CQ03559 197 aa1.79□□□□□ -2.12
RTG3YBL103C RIB3Q99258 208 aa1.79□□□□□ -2.12
RTG3YBL103C TAF2P23255 1407 aa1.79□□□□□ -2.12
RTG3YBL103C YET1P35723 206 aa1.78□□□□□ -2.12
RTG3YBL103C TVP23P38962 199 aa1.78□□□□□ -2.12
RTG3YBL103C RPL33BP41056 107 aaKnown RBP1.78□□□□□ -2.12
RTG3YBL103C YNR077CP53758 84 aa1.78□□□□□ -2.12
RTG3YBL103C MRPS8Q03799 155 aa1.78□□□□□ -2.12
RTG3YBL103C YOR214CQ12282 236 aa1.78□□□□□ -2.12
RTG3YBL103C TIR1P10863 254 aa1.77□□□□□ -2.13
RTG3YBL103C YPL073CP40323 161 aa1.77□□□□□ -2.13
RTG3YBL103C CUP9P41817 306 aa1.77□□□□□ -2.13
RTG3YBL103C GLR1P41921 483 aaKnown RBP1.77□□□□□ -2.13
RTG3YBL103C RBL2P48606 106 aaKnown RBP1.77□□□□□ -2.13
RTG3YBL103C DOC1P53068 250 aa1.77□□□□□ -2.13
RTG3YBL103C YGL193CP53097 103 aa1.77□□□□□ -2.13
RTG3YBL103C MPC3P53311 146 aa1.77□□□□□ -2.13
RTG3YBL103C VPS28Q02767 242 aa1.77□□□□□ -2.13
RTG3YBL103C GAL83Q04739 417 aa1.77□□□□□ -2.13
RTG3YBL103C ATP5P09457 212 aa1.76□□□□□ -2.13
RTG3YBL103C FYV4P38783 130 aaPredicted RBP1.76□□□□□ -2.13
RTG3YBL103C FIP1P45976 327 aa1.76□□□□□ -2.13
RTG3YBL103C YKR005CQ02203 525 aa1.76□□□□□ -2.13
RTG3YBL103C SHH3Q04487 196 aa1.76□□□□□ -2.13
RTG3YBL103C YMR253CQ04835 414 aa1.76□□□□□ -2.13
RTG3YBL103C FSF1Q12029 327 aaKnown RBP1.76□□□□□ -2.13
RTG3YBL103C PST2Q12335 198 aaKnown RBP1.76□□□□□ -2.13
RTG3YBL103C YLR361C-AQ3E795 98 aa1.76□□□□□ -2.13
RTG3YBL103C FZF1P32805 299 aa1.75□□□□□ -2.13
RTG3YBL103C PTC1P35182 281 aa1.75□□□□□ -2.13
RTG3YBL103C PAM17P36147 197 aa1.75□□□□□ -2.13
RTG3YBL103C ERV15P38312 142 aa1.75□□□□□ -2.13
RTG3YBL103C YBR220CP38318 560 aa1.75□□□□□ -2.13
RTG3YBL103C SPC25P40014 221 aa1.75□□□□□ -2.13
RTG3YBL103C NSA2P40078 261 aaKnown RBP1.75□□□□□ -2.13
RTG3YBL103C YNL200CP40165 246 aaKnown RBP1.75□□□□□ -2.13
RTG3YBL103C TIR3P40552 269 aa1.75□□□□□ -2.13
RTG3YBL103C YNR062CP53748 327 aa1.75□□□□□ -2.13
RTG3YBL103C CSN9Q03981 162 aa1.75□□□□□ -2.13
RTG3YBL103C YMR320WQ04897 101 aa1.75□□□□□ -2.13
RTG3YBL103C RFU1Q08003 200 aa1.75□□□□□ -2.13
RTG3YBL103C TRM3Q07527 1436 aa1.75□□□□□ -2.13
RTG3YBL103C RAD6P06104 172 aa1.75□□□□□ -2.13
RTG3YBL103C HSP30P25619 332 aa1.75□□□□□ -2.13
RTG3YBL103C SHE2P36068 246 aaKnown RBP RIP-Chip data1.75□□□□□ -2.13not detected
RTG3YBL103C CCC1P47818 322 aa1.75□□□□□ -2.13
RTG3YBL103C UBC7Q02159 165 aa1.75□□□□□ -2.13
RTG3YBL103C ATP20Q12233 115 aa1.75□□□□□ -2.13
RTG3YBL103C RAS2P01120 322 aaKnown RBP1.74□□□□□ -2.13
RTG3YBL103C SUA7P29055 345 aaPredicted RBP1.74□□□□□ -2.13
RTG3YBL103C PRS3P38689 320 aaKnown RBP1.74□□□□□ -2.13
RTG3YBL103C VMA22P38784 181 aa1.74□□□□□ -2.13
RTG3YBL103C HTD2P38790 280 aaKnown RBP1.74□□□□□ -2.13
RTG3YBL103C YEL028WP39989 153 aa1.74□□□□□ -2.13
RTG3YBL103C YNL217WP40152 326 aa1.74□□□□□ -2.13
RTG3YBL103C RIO2P40160 425 aaKnown RBP1.74□□□□□ -2.13
RTG3YBL103C BOL2P53082 120 aa1.74□□□□□ -2.13
RTG3YBL103C YDR391CQ04170 232 aa1.74□□□□□ -2.13
RTG3YBL103C HRD1Q08109 551 aa1.74□□□□□ -2.13
RTG3YBL103C IRC23Q08416 157 aa1.74□□□□□ -2.13
RTG3YBL103C NHP6AP11632 93 aaKnown RBP1.73□□□□□ -2.13
RTG3YBL103C PEX4P29340 183 aa1.73□□□□□ -2.13
RTG3YBL103C RRT1P38192 103 aa1.73□□□□□ -2.13
RTG3YBL103C PHO88P38264 188 aaPredicted RBP1.73□□□□□ -2.13
RTG3YBL103C YER135CP40082 130 aa1.73□□□□□ -2.13
RTG3YBL103C PHB1P40961 287 aa1.73□□□□□ -2.13
RTG3YBL103C HHO1P53551 258 aa1.73□□□□□ -2.13
RTG3YBL103C YDR366CP87287 132 aa1.73□□□□□ -2.13
RTG3YBL103C DYN2Q02647 92 aa1.73□□□□□ -2.13
RTG3YBL103C COF1Q03048 143 aaKnown RBP1.73□□□□□ -2.13
RTG3YBL103C YDR278CQ05612 105 aa1.73□□□□□ -2.13
RTG3YBL103C SYM1Q06563 197 aa1.73□□□□□ -2.13
RTG3YBL103C ATG40Q99325 256 aa1.73□□□□□ -2.13
RTG3YBL103C YLR236CA0A023PZG4 107 aa1.72□□□□□ -2.13
RTG3YBL103C SPT14P32363 452 aa1.72□□□□□ -2.13
RTG3YBL103C YER181CP40097 107 aa1.72□□□□□ -2.13
RTG3YBL103C YJL218WP40892 196 aaKnown RBP1.72□□□□□ -2.13
RTG3YBL103C GPI2P46961 280 aa1.72□□□□□ -2.13
RTG3YBL103C YNL033WP53964 284 aa1.72□□□□□ -2.13
RTG3YBL103C FMN1Q03778 218 aa1.72□□□□□ -2.13
RTG3YBL103C YPD1Q07688 167 aa1.72□□□□□ -2.13
RTG3YBL103C CIN5P40917 295 aa1.71□□□□□ -2.14
RTG3YBL103C DAD3P69850 94 aa1.71□□□□□ -2.14
RTG3YBL103C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
RTG3YBL103C MET5P47169 1442 aa1.71□□□□□ -2.14
RTG3YBL103C ECM5Q03214 1411 aa1.71□□□□□ -2.14
RTG3YBL103C RAD50P12753 1312 aa1.71□□□□□ -2.14
RTG3YBL103C PHO13P19881 312 aa1.7□□□□□ -2.14
RTG3YBL103C SRP21P32342 167 aa1.7□□□□□ -2.14
RTG3YBL103C YBR209WP38311 105 aa1.7□□□□□ -2.14
RTG3YBL103C PEP8P40335 379 aa1.7□□□□□ -2.14
RTG3YBL103C YGR039WP53225 103 aa1.7□□□□□ -2.14
RTG3YBL103C PIR1Q03178 341 aa1.7□□□□□ -2.14
RTG3YBL103C CUE4Q04201 117 aaPredicted RBP1.7□□□□□ -2.14
RTG3YBL103C RIM9Q04734 239 aa1.7□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 70 ms