RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W POM34Q12445 299 aa4.4□□□□□ -1.71
SHP1YBL058W CYC3P06182 269 aa4.39□□□□□ -1.71
SHP1YBL058W CPR4P25334 318 aa4.39□□□□□ -1.71
SHP1YBL058W LAG1P38703 411 aa4.39□□□□□ -1.71
SHP1YBL058W COS8P38723 381 aa4.39□□□□□ -1.71
SHP1YBL058W MST28P39552 234 aa4.39□□□□□ -1.71
SHP1YBL058W HPA3P39979 161 aa4.39□□□□□ -1.71
SHP1YBL058W SNU13P39990 126 aaKnown RBP4.39□□□□□ -1.71
SHP1YBL058W YIL077CP40508 320 aa4.39□□□□□ -1.71
SHP1YBL058W ARO8P53090 500 aaKnown RBP4.39□□□□□ -1.71
SHP1YBL058W MST27P53176 234 aa4.39□□□□□ -1.71
SHP1YBL058W COX12Q01519 83 aa4.39□□□□□ -1.71
SHP1YBL058W ATG39Q06159 398 aa4.39□□□□□ -1.71
SHP1YBL058W STP4Q07351 490 aa4.39□□□□□ -1.71
SHP1YBL058W MSH5Q12175 901 aa4.39□□□□□ -1.71
SHP1YBL058W PRM4Q12498 284 aa4.39□□□□□ -1.71
SHP1YBL058W YGL258W-AQ3E740 77 aa4.39□□□□□ -1.71
SHP1YBL058W PAN3P36102 679 aaPredicted RBP4.38□□□□□ -1.71
SHP1YBL058W LSM12P38828 187 aaKnown RBP4.38□□□□□ -1.71
SHP1YBL058W LSM1P47017 172 aaKnown RBP4.38□□□□□ -1.71
SHP1YBL058W TDA4P47153 279 aa4.38□□□□□ -1.71
SHP1YBL058W PHO23P50947 330 aa4.38□□□□□ -1.71
SHP1YBL058W FYV6P53913 173 aa4.38□□□□□ -1.71
SHP1YBL058W RTT103Q05543 409 aa4.38□□□□□ -1.71
SHP1YBL058W PAM18Q07914 168 aa4.38□□□□□ -1.71
SHP1YBL058W MIT1P40002 666 aa4.37□□□□□ -1.71
SHP1YBL058W JLP2P40206 208 aa4.37□□□□□ -1.71
SHP1YBL058W POR2P40478 281 aa4.37□□□□□ -1.71
SHP1YBL058W DYN2Q02647 92 aa4.37□□□□□ -1.71
SHP1YBL058W EST3Q03096 181 aa4.37□□□□□ -1.71
SHP1YBL058W YOR385WQ08909 290 aa4.37□□□□□ -1.71
SHP1YBL058W IES3Q12345 250 aa4.37□□□□□ -1.71
SHP1YBL058W AGC1Q12482 902 aa4.37□□□□□ -1.71
SHP1YBL058W CDS1P38221 457 aa4.36□□□□□ -1.71
SHP1YBL058W MBA1P38300 278 aa4.36□□□□□ -1.71
SHP1YBL058W IRC18P47056 224 aa4.36□□□□□ -1.71
SHP1YBL058W MIC26P50087 233 aa4.36□□□□□ -1.71
SHP1YBL058W MSO1P53604 210 aaKnown RBP4.36□□□□□ -1.71
SHP1YBL058W SMX3P54999 86 aaPredicted RBP4.36□□□□□ -1.71
SHP1YBL058W TIM18Q08749 192 aa4.36□□□□□ -1.71
SHP1YBL058W FEX1Q08913 375 aa4.36□□□□□ -1.71
SHP1YBL058W FEX2Q08991 375 aa4.36□□□□□ -1.71
SHP1YBL058W NKP1Q12493 238 aa4.36□□□□□ -1.71
SHP1YBL058W URA5P13298 226 aaKnown RBP4.35□□□□□ -1.71
SHP1YBL058W RRT1P38192 103 aa4.35□□□□□ -1.71
SHP1YBL058W AIM25P47140 327 aa4.35□□□□□ -1.71
SHP1YBL058W YAP1802P53309 568 aa4.35□□□□□ -1.71
SHP1YBL058W GIS2P53849 153 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71 RIP-Chip
SHP1YBL058W FMP42Q04991 504 aa4.35□□□□□ -1.71
SHP1YBL058W HTZ1Q12692 134 aaKnown RBP4.35□□□□□ -1.71
SHP1YBL058W RTC3P38804 111 aaPredicted RBP4.34□□□□□ -1.71
SHP1YBL058W BFR1P38934 470 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71 RIP-Chip
SHP1YBL058W YGR050CP53231 118 aa4.34□□□□□ -1.71
SHP1YBL058W OCA2P53949 197 aa4.34□□□□□ -1.71
SHP1YBL058W PAA1Q12447 191 aaKnown RBP4.34□□□□□ -1.71
SHP1YBL058W QCR2P07257 368 aa4.33□□□□□ -1.72
SHP1YBL058W YBL071CP38185 102 aa4.33□□□□□ -1.72
SHP1YBL058W ERV15P38312 142 aa4.33□□□□□ -1.72
SHP1YBL058W WSS1P38838 269 aa4.33□□□□□ -1.72
SHP1YBL058W NSA2P40078 261 aaKnown RBP4.33□□□□□ -1.72
SHP1YBL058W SER2P42941 309 aa4.33□□□□□ -1.72
SHP1YBL058W YJL027CP47063 138 aaPredicted RBP4.33□□□□□ -1.72
SHP1YBL058W YPS3Q12303 508 aa4.33□□□□□ -1.72
SHP1YBL058W YOR011W-AQ3E807 68 aa4.33□□□□□ -1.72
SHP1YBL058W POP5P28005 173 aa4.32□□□□□ -1.72
SHP1YBL058W UPS2P35200 230 aa4.32□□□□□ -1.72
SHP1YBL058W SNF11P38956 169 aa4.32□□□□□ -1.72
SHP1YBL058W UBC11P52492 156 aa4.32□□□□□ -1.72
SHP1YBL058W YGR018CP53211 109 aa4.32□□□□□ -1.72
SHP1YBL058W YGR025WP53216 100 aa4.32□□□□□ -1.72
SHP1YBL058W VPS28Q02767 242 aa4.32□□□□□ -1.72
SHP1YBL058W SPO19Q03029 223 aa4.32□□□□□ -1.72
SHP1YBL058W LDS2Q08218 356 aa4.32□□□□□ -1.72
SHP1YBL058W USV1Q12132 391 aa4.32□□□□□ -1.72
SHP1YBL058W TRM13Q12383 476 aa4.32□□□□□ -1.72
SHP1YBL058W YCR022CP25620 114 aa4.31□□□□□ -1.72
SHP1YBL058W FPR2P32472 135 aa4.31□□□□□ -1.72
SHP1YBL058W IPI1P38803 334 aaPredicted RBP4.31□□□□□ -1.72
SHP1YBL058W CWC23P52868 283 aaPredicted RBP4.31□□□□□ -1.72
SHP1YBL058W FRQ1Q06389 190 aa4.31□□□□□ -1.72
SHP1YBL058W IZH3Q07959 543 aa4.31□□□□□ -1.72
SHP1YBL058W POC4Q12245 148 aaPredicted RBP4.31□□□□□ -1.72
SHP1YBL058W MRP17P28778 131 aa4.3□□□□□ -1.72
SHP1YBL058W AVT5P38176 459 aa4.3□□□□□ -1.72
SHP1YBL058W CSH1P38287 376 aa4.3□□□□□ -1.72
SHP1YBL058W GLE2P40066 365 aa4.3□□□□□ -1.72
SHP1YBL058W RTS2P40962 232 aa4.3□□□□□ -1.72
SHP1YBL058W NIF3P53081 288 aa4.3□□□□□ -1.72
SHP1YBL058W ORM1P53224 222 aa4.3□□□□□ -1.72
SHP1YBL058W HCH1P53834 153 aa4.3□□□□□ -1.72
SHP1YBL058W YCT1Q12235 531 aa4.3□□□□□ -1.72
SHP1YBL058W RDI1Q12434 202 aa4.3□□□□□ -1.72
SHP1YBL058W PRM7Q12459 698 aa4.3□□□□□ -1.72
SHP1YBL058W YCR016WP25617 290 aaKnown RBP4.29□□□□□ -1.72
SHP1YBL058W SIP1P32578 815 aa4.29□□□□□ -1.72
SHP1YBL058W YKL162CP36052 402 aa4.29□□□□□ -1.72
SHP1YBL058W ELF1P36053 145 aa4.29□□□□□ -1.72
SHP1YBL058W BDH1P39714 382 aa4.29□□□□□ -1.72
SHP1YBL058W GPI2P46961 280 aa4.29□□□□□ -1.72
SHP1YBL058W LCB3P47013 409 aa4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms