RNA–Protein interactions for RNA: YBL041W

PRE7, Transcript of Beta 6 subunit of the 20S proteasome, yeastyeast

Gene PRE7, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE7YBL041W COX2P00410 251 aa3.91□□□□□ -1.78
PRE7YBL041W QCR2P07257 368 aa3.91□□□□□ -1.78
PRE7YBL041W CAP2P13517 287 aa3.91□□□□□ -1.78
PRE7YBL041W MRS4P23500 304 aa3.91□□□□□ -1.78
PRE7YBL041W COQ3P27680 312 aa3.91□□□□□ -1.78
PRE7YBL041W SDH4P37298 181 aa3.91□□□□□ -1.78
PRE7YBL041W PAM18Q07914 168 aa3.91□□□□□ -1.78
PRE7YBL041W YGL258W-AQ3E740 77 aa3.91□□□□□ -1.78
PRE7YBL041W SOD1P00445 154 aaKnown RBP3.9□□□□□ -1.79
PRE7YBL041W GRX2P17695 143 aaKnown RBP3.9□□□□□ -1.79
PRE7YBL041W ERV1P27882 189 aa3.9□□□□□ -1.79
PRE7YBL041W YPS1P32329 569 aa3.9□□□□□ -1.79
PRE7YBL041W ERV15P38312 142 aa3.9□□□□□ -1.79
PRE7YBL041W MIC12P38341 106 aa3.9□□□□□ -1.79
PRE7YBL041W YPT31P38555 223 aaKnown RBP3.9□□□□□ -1.79
PRE7YBL041W SYG1P40528 902 aa3.9□□□□□ -1.79
PRE7YBL041W ECM27P47144 725 aa3.9□□□□□ -1.79
PRE7YBL041W DUO1P53168 247 aaKnown RBP3.9□□□□□ -1.79
PRE7YBL041W YLR281CQ05863 155 aa3.9□□□□□ -1.79
PRE7YBL041W YCT1Q12235 531 aa3.9□□□□□ -1.79
PRE7YBL041W ATG5Q12380 294 aa3.9□□□□□ -1.79
PRE7YBL041W RDI1Q12434 202 aa3.9□□□□□ -1.79
PRE7YBL041W YBR255C-AQ3E776 120 aa3.9□□□□□ -1.79
PRE7YBL041W PET494P07390 489 aaPredicted RBP3.89□□□□□ -1.79
PRE7YBL041W NHP6BP11633 99 aaKnown RBP3.89□□□□□ -1.79
PRE7YBL041W YCR016WP25617 290 aaKnown RBP3.89□□□□□ -1.79
PRE7YBL041W MRP17P28778 131 aa3.89□□□□□ -1.79
PRE7YBL041W MRPL3P36516 390 aa3.89□□□□□ -1.79
PRE7YBL041W MPC2P38857 129 aa3.89□□□□□ -1.79
PRE7YBL041W BFR1P38934 470 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
PRE7YBL041W DFG10P40526 253 aa3.89□□□□□ -1.79
PRE7YBL041W MRPL49P40858 161 aaPredicted RBP3.89□□□□□ -1.79
PRE7YBL041W CPD1P53314 239 aa3.89□□□□□ -1.79
PRE7YBL041W EST3Q03096 181 aa3.89□□□□□ -1.79
PRE7YBL041W IRC23Q08416 157 aa3.89□□□□□ -1.79
PRE7YBL041W SPS2P08459 502 aa3.88□□□□□ -1.79
PRE7YBL041W PDC2P32896 925 aa3.88□□□□□ -1.79
PRE7YBL041W DOG2P38773 246 aa3.88□□□□□ -1.79
PRE7YBL041W DOG1P38774 246 aa3.88□□□□□ -1.79
PRE7YBL041W RTC3P38804 111 aaPredicted RBP3.88□□□□□ -1.79
PRE7YBL041W YAR068WP39564 161 aa3.88□□□□□ -1.79
PRE7YBL041W ACT1P60010 375 aaKnown RBP3.88□□□□□ -1.79
PRE7YBL041W VPS28Q02767 242 aa3.88□□□□□ -1.79
PRE7YBL041W YMR181CQ03231 154 aa3.88□□□□□ -1.79
PRE7YBL041W GRH1Q04410 372 aaKnown RBP3.88□□□□□ -1.79
PRE7YBL041W TPI1P00942 248 aaKnown RBP3.87□□□□□ -1.79
PRE7YBL041W ARG80P07249 177 aa3.87□□□□□ -1.79
PRE7YBL041W AUA1P32450 94 aa3.87□□□□□ -1.79
PRE7YBL041W SUA5P32579 426 aa3.87□□□□□ -1.79
PRE7YBL041W ALK2P32789 676 aaPredicted RBP3.87□□□□□ -1.79
PRE7YBL041W YPC1P38298 316 aa3.87□□□□□ -1.79
PRE7YBL041W SDH8P38345 138 aa3.87□□□□□ -1.79
PRE7YBL041W RPL13BP40212 199 aaKnown RBP3.87□□□□□ -1.79
PRE7YBL041W YPI1P43587 155 aa3.87□□□□□ -1.79
PRE7YBL041W ARO8P53090 500 aaKnown RBP3.87□□□□□ -1.79
PRE7YBL041W YGR050CP53231 118 aa3.87□□□□□ -1.79
PRE7YBL041W MSO1P53604 210 aaKnown RBP3.87□□□□□ -1.79
PRE7YBL041W SWT21P53873 357 aaPredicted RBP3.87□□□□□ -1.79
PRE7YBL041W YDR274CP87283 123 aa3.87□□□□□ -1.79
PRE7YBL041W PEX10Q05568 337 aa3.87□□□□□ -1.79
PRE7YBL041W FEX2Q08991 375 aa3.87□□□□□ -1.79
PRE7YBL041W RPL13AQ12690 199 aaPredicted RBP3.87□□□□□ -1.79
PRE7YBL041W TFB5Q3E7C1 72 aaPredicted RBP3.87□□□□□ -1.79
PRE7YBL041W CYC3P06182 269 aa3.86□□□□□ -1.79
PRE7YBL041W PUT1P09368 476 aa3.86□□□□□ -1.79
PRE7YBL041W YKL162CP36052 402 aa3.86□□□□□ -1.79
PRE7YBL041W RRT1P38192 103 aa3.86□□□□□ -1.79
PRE7YBL041W YBR242WP38331 238 aa3.86□□□□□ -1.79
PRE7YBL041W NSA2P40078 261 aaKnown RBP3.86□□□□□ -1.79
PRE7YBL041W YKE4P40544 346 aa3.86□□□□□ -1.79
PRE7YBL041W MRPS16Q02608 121 aa3.86□□□□□ -1.79
PRE7YBL041W FEX1Q08913 375 aa3.86□□□□□ -1.79
PRE7YBL041W YPS3Q12303 508 aa3.86□□□□□ -1.79
PRE7YBL041W PRM4Q12498 284 aa3.86□□□□□ -1.79
PRE7YBL041W URA5P13298 226 aaKnown RBP3.85□□□□□ -1.79
PRE7YBL041W YRA2P36036 203 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
PRE7YBL041W YBL071CP38185 102 aa3.85□□□□□ -1.79
PRE7YBL041W QDR3P38227 689 aa3.85□□□□□ -1.79
PRE7YBL041W YGR210CP42942 411 aa3.85□□□□□ -1.79
PRE7YBL041W CAX4P53223 239 aa3.85□□□□□ -1.79
PRE7YBL041W DYN2Q02647 92 aa3.85□□□□□ -1.79
PRE7YBL041W MSC3Q05812 728 aa3.85□□□□□ -1.79
PRE7YBL041W DCS1Q06151 350 aa3.85□□□□□ -1.79
PRE7YBL041W FRQ1Q06389 190 aa3.85□□□□□ -1.79
PRE7YBL041W TIM18Q08749 192 aa3.85□□□□□ -1.79
PRE7YBL041W AIM45Q12480 344 aaKnown RBP3.85□□□□□ -1.79
PRE7YBL041W ECM33P38248 429 aaKnown RBP3.84□□□□□ -1.79
PRE7YBL041W WSS1P38838 269 aa3.84□□□□□ -1.79
PRE7YBL041W POR2P40478 281 aa3.84□□□□□ -1.79
PRE7YBL041W HXT14P42833 540 aa3.84□□□□□ -1.79
PRE7YBL041W HCH1P53834 153 aa3.84□□□□□ -1.79
PRE7YBL041W YIF1P53845 314 aaKnown RBP3.84□□□□□ -1.79
PRE7YBL041W ERV25P54837 211 aaKnown RBP3.84□□□□□ -1.79
PRE7YBL041W SCW10Q04951 389 aa3.84□□□□□ -1.79
PRE7YBL041W TRI1Q05024 226 aa3.84□□□□□ -1.79
PRE7YBL041W RRG8Q06109 277 aa3.84□□□□□ -1.79
PRE7YBL041W ATG39Q06159 398 aa3.84□□□□□ -1.79
PRE7YBL041W YPL264CQ08980 353 aa3.84□□□□□ -1.79
PRE7YBL041W PAA1Q12447 191 aaKnown RBP3.84□□□□□ -1.79
PRE7YBL041W TAR1Q8TGM6 124 aa3.84□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms