RNA–Protein interactions for RNA: YAR003W

SWD1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD1, Length 1,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD1YAR003W YBR292CP38357 123 aa5.45□□□□□ -1.54
SWD1YAR003W NSA2P40078 261 aaKnown RBP5.45□□□□□ -1.54
SWD1YAR003W EST3Q03096 181 aa5.45□□□□□ -1.54
SWD1YAR003W NDE2Q07500 545 aa5.45□□□□□ -1.54
SWD1YAR003W RAX2Q12465 1220 aa5.45□□□□□ -1.54
SWD1YAR003W YIL002W-AQ3E7Z5 69 aa5.45□□□□□ -1.54
SWD1YAR003W MRS4P23500 304 aa5.44□□□□□ -1.54
SWD1YAR003W BPH1P25356 2167 aa5.44□□□□□ -1.54
SWD1YAR003W UPS2P35200 230 aa5.44□□□□□ -1.54
SWD1YAR003W YKL075CP36083 450 aa5.44□□□□□ -1.54
SWD1YAR003W YER188WP40103 239 aa5.44□□□□□ -1.54
SWD1YAR003W DFG10P40526 253 aa5.44□□□□□ -1.54
SWD1YAR003W CGR1P53188 120 aa5.44□□□□□ -1.54
SWD1YAR003W YGR151CP53287 111 aa5.44□□□□□ -1.54
SWD1YAR003W DYN2Q02647 92 aa5.44□□□□□ -1.54
SWD1YAR003W STD1Q02794 444 aa5.44□□□□□ -1.54
SWD1YAR003W RPL15AP05748 204 aaKnown RBP5.43□□□□□ -1.54
SWD1YAR003W RPS25BP0C0T4 108 aaKnown RBP5.43□□□□□ -1.54
SWD1YAR003W FEN2P25621 512 aaKnown RBP5.43□□□□□ -1.54
SWD1YAR003W EMP24P32803 203 aaKnown RBP5.43□□□□□ -1.54
SWD1YAR003W LSM4P40070 187 aaKnown RBP5.43□□□□□ -1.54
SWD1YAR003W APJ1P53940 528 aa5.43□□□□□ -1.54
SWD1YAR003W RPL15BP54780 204 aaPredicted RBP5.43□□□□□ -1.54
SWD1YAR003W YCL001W-AP87012 153 aa5.43□□□□□ -1.54
SWD1YAR003W YMR317WQ04893 1140 aa5.43□□□□□ -1.54
SWD1YAR003W YPS3Q12303 508 aa5.43□□□□□ -1.54
SWD1YAR003W PRR2Q12310 699 aa5.43□□□□□ -1.54
SWD1YAR003W ATO3Q12359 275 aa5.43□□□□□ -1.54
SWD1YAR003W RPS25AQ3E792 108 aaPredicted RBP5.43□□□□□ -1.54
SWD1YAR003W YDR157WA0A023PZE8 133 aa5.42□□□□□ -1.54
SWD1YAR003W MRP2P10663 115 aaPredicted RBP5.42□□□□□ -1.54
SWD1YAR003W WSS1P38838 269 aa5.42□□□□□ -1.54
SWD1YAR003W PSD1P39006 500 aa5.42□□□□□ -1.54
SWD1YAR003W HXT14P42833 540 aa5.42□□□□□ -1.54
SWD1YAR003W CAF16P43569 289 aa5.42□□□□□ -1.54
SWD1YAR003W YPL108WQ02872 168 aaPredicted RBP5.42□□□□□ -1.54
SWD1YAR003W YDL242WQ07746 117 aa5.42□□□□□ -1.54
SWD1YAR003W RAD28Q12021 506 aa5.42□□□□□ -1.54
SWD1YAR003W ILV5P06168 395 aaKnown RBP5.41□□□□□ -1.54
SWD1YAR003W QCR9P22289 66 aa5.41□□□□□ -1.54
SWD1YAR003W TOM40P23644 387 aaKnown RBP5.41□□□□□ -1.54
SWD1YAR003W SNN1P48232 102 aa5.41□□□□□ -1.54
SWD1YAR003W CAF40P53829 373 aa5.41□□□□□ -1.54
SWD1YAR003W HCH1P53834 153 aa5.41□□□□□ -1.54
SWD1YAR003W YNL234WP53857 426 aa5.41□□□□□ -1.54
SWD1YAR003W FRQ1Q06389 190 aa5.41□□□□□ -1.54
SWD1YAR003W FCY1Q12178 158 aa5.41□□□□□ -1.54
SWD1YAR003W LAS17Q12446 633 aa5.41□□□□□ -1.54
SWD1YAR003W PAA1Q12447 191 aaKnown RBP5.41□□□□□ -1.54
SWD1YAR003W YER145C-AA0A023PYF4 145 aa5.4□□□□□ -1.54
SWD1YAR003W SPO13P23624 291 aa5.4□□□□□ -1.54
SWD1YAR003W MSK1P32048 576 aa5.4□□□□□ -1.54
SWD1YAR003W SRB6P32570 121 aa5.4□□□□□ -1.54
SWD1YAR003W SHB17P36136 271 aaKnown RBP5.4□□□□□ -1.54
SWD1YAR003W RIB5P38145 238 aa5.4□□□□□ -1.54
SWD1YAR003W YBL071CP38185 102 aa5.4□□□□□ -1.54
SWD1YAR003W YPT31P38555 223 aaKnown RBP5.4□□□□□ -1.54
SWD1YAR003W SPC25P40014 221 aa5.4□□□□□ -1.54
SWD1YAR003W LST8P41318 303 aa5.4□□□□□ -1.54
SWD1YAR003W YJL163CP46996 555 aa5.4□□□□□ -1.54
SWD1YAR003W CRH1P53301 507 aa5.4□□□□□ -1.54
SWD1YAR003W ADD37Q03233 198 aa5.4□□□□□ -1.54
SWD1YAR003W MCH1Q07376 486 aa5.4□□□□□ -1.54
SWD1YAR003W SRL1Q08673 210 aa5.4□□□□□ -1.54
SWD1YAR003W YOR015WQ12169 119 aa5.4□□□□□ -1.54
SWD1YAR003W RKI1Q12189 258 aa5.4□□□□□ -1.54
SWD1YAR003W POC4Q12245 148 aaPredicted RBP5.4□□□□□ -1.54
SWD1YAR003W ATP14Q12349 124 aa5.4□□□□□ -1.54
SWD1YAR003W YIL077CP40508 320 aa5.39□□□□□ -1.55
SWD1YAR003W YJR015WP47090 510 aa5.39□□□□□ -1.55
SWD1YAR003W MCM22P47167 239 aa5.39□□□□□ -1.55
SWD1YAR003W RIB4P50861 169 aaPredicted RBP5.39□□□□□ -1.55
SWD1YAR003W MIC27P50945 234 aa5.39□□□□□ -1.55
SWD1YAR003W FMP41P53889 259 aaKnown RBP5.39□□□□□ -1.55
SWD1YAR003W ERV25P54837 211 aaKnown RBP5.39□□□□□ -1.55
SWD1YAR003W TMA23Q03525 211 aa5.39□□□□□ -1.55
SWD1YAR003W YOR097CQ12274 175 aaPredicted RBP5.39□□□□□ -1.55
SWD1YAR003W CCW14O13547 238 aa5.38□□□□□ -1.55
SWD1YAR003W DFR1P07807 211 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
SWD1YAR003W YCR025CP25352 136 aa5.38□□□□□ -1.55
SWD1YAR003W ELO2P25358 347 aa5.38□□□□□ -1.55
SWD1YAR003W LDS1P31379 325 aa5.38□□□□□ -1.55
SWD1YAR003W YGR269WP40326 108 aa5.38□□□□□ -1.55
SWD1YAR003W SMD3P43321 101 aaKnown RBP5.38□□□□□ -1.55
SWD1YAR003W ODC1Q03028 310 aa5.38□□□□□ -1.55
SWD1YAR003W ARR3Q06598 404 aa5.38□□□□□ -1.55
SWD1YAR003W SME1Q12330 94 aaPredicted RBP5.38□□□□□ -1.55
SWD1YAR003W COX19Q3E731 98 aa5.38□□□□□ -1.55
SWD1YAR003W MRS3P10566 314 aa5.37□□□□□ -1.55
SWD1YAR003W CDC50P25656 391 aa5.37□□□□□ -1.55
SWD1YAR003W FPR2P32472 135 aa5.37□□□□□ -1.55
SWD1YAR003W SIP1P32578 815 aa5.37□□□□□ -1.55
SWD1YAR003W MRPL38P35996 138 aaPredicted RBP5.37□□□□□ -1.55
SWD1YAR003W PRS4P38063 326 aaPredicted RBP5.37□□□□□ -1.55
SWD1YAR003W RRT1P38192 103 aa5.37□□□□□ -1.55
SWD1YAR003W CDS1P38221 457 aa5.37□□□□□ -1.55
SWD1YAR003W RTS2P40962 232 aa5.37□□□□□ -1.55
SWD1YAR003W LSM8P47093 109 aaKnown RBP5.37□□□□□ -1.55
SWD1YAR003W BOR1P53838 576 aa5.37□□□□□ -1.55
SWD1YAR003W YMR166CQ03829 368 aa5.37□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 45.9 ms